mRNA_10588 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|88987
Unique NamemRNA_10588
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: A0A836C9F1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F1_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 4.720e-138
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1
Query:   40 MSSPSPEGLACIGRTFTSAGGSAPGTPEPAPKSARSSGETEEERVMRELQESXXXXXXXXXXXXXXSYQAGMDALRAAQGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSVCG 714
            MSSPSPEGLACIGRTFTSAGGSAPGTPEPAPKSARSSGETEEERVMRELQESXXXXXXXXXXXXXXSYQAGMDALRAAQGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSVCG
Sbjct:    1 MSSPSPEGLACIGRTFTSAGGSAPGTPEPAPKSARSSGETEEERVMRELQESXXXXXXXXXXXXXXSYQAGMDALRAAQGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSVCG 225          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: K0RAC2_THAOC (RING-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAC2_THAOC)

HSP 1 Score: 113 bits (283), Expect = 1.350e-25
Identity = 89/190 (46.84%), Postives = 113/190 (59.47%), Query Frame = 1
Query:  154 ETEEERVMRELQESXXXXXXXXXXXXXXSYQAGMDALRAAQGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLP-----RKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 708
            ETEEER+ RE++ESXXXXXXXXXXX   S  A  + LR  Q    +D     +D+ A++ A+ EE ED GG     + EG E   M YDALL LGE IGDVK+ERWRL +   I +LP     R+ A  +           T  KC VC  +YE G+EL ALPCGH +HA+C+  WL   D C LC++S+
Sbjct:  204 ETEEERLAREMEESXXXXXXXXXXXAILSIAASQNFLR--QNADRFD----SSDLAAIQAALAEETEDAGGDEVAADGEGGESNEMSYDALLRLGENIGDVKEERWRLVSKEKIEKLPTVKFLREMAEGKEENH-------TLVKCQVCQFKYEEGDELRALPCGHYFHAACIDEWLTNKDTCALCRKSI 380          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: D7FY13_ECTSI (Ring finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY13_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 8.870e-23
Identity = 63/161 (39.13%), Postives = 85/161 (52.80%), Query Frame = 1
Query:  238 SYQAGMDALRAAQGMG----GWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 708
            SY A +D  R+A        G  EG+   D+ AM+  M E++ +       E+E       ++YD +LELG AIGDV+++RWR+R  + IA LPR    A             D KCLVC C+YE  +EL  LPC H +H  CV  WL   + CP C+RSV
Sbjct:   51 SYAAAVDNFRSAAXXXXXXXGGMEGVAPEDMAAMQALMEEDENNPDAFAMAEDES------LDYDGMLELGSAIGDVRKDRWRMRCKSVIAALPRVSYTAGGYSGG------EDTKCLVCQCDYEEDDELRILPCSHTFHTECVDGWLEENEECPTCRRSV 199          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: A0A7S2YQL4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQL4_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.550e-20
Identity = 66/180 (36.67%), Postives = 91/180 (50.56%), Query Frame = 1
Query:  169 RVMRELQESXXXXXXXXXXXXXXSYQAGMDALRAAQGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 708
            R  RE +ES              SYQ  +  LR ++        + + D +A+  A+ EE+ +  G    E E  DEE  + Y+ +L+LGE IGDVK ERW + A   IA+LP +             A  +++KCLVC  EYE GE L  LPCGH +H  CV  WL R D CP C+ ++
Sbjct:    1 RRQREEEESLELARMLMAEEAMASYQHSVQYLRDSRDQ------LSQEDYQALEAALQEEEAEQEGAAVAELE--DEEGNLSYETMLQLGERIGDVKSERWTVVAQKHIAKLPTE---IFDNNKIKKDADDSESKCLVCQHEYECGENLRRLPCGHCFHMECVDQWLERTDLCPYCRTAI 169          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: A0A1E7FQW7_9STRA (RING-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQW7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.810e-20
Identity = 68/185 (36.76%), Postives = 93/185 (50.27%), Query Frame = 1
Query:  157 TEEERVMRELQESXXXXXXXXXXXXXXSYQAGMDALRAAQGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPR-KRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 708
            T E+R  RE +ES              +Y A MD LR  Q          E D+ A ++AM +++++   + + EE+ G + + M Y+A+L+LGE IGDVK ERW  RA   I  LP  K    +         C  D KCL+C  EY  GE+L  LPC H +H  CV  WL   D CP C+ S+
Sbjct:   67 TAEQRAAREEEESIELARAMMAEEAMGAYAAHMDYLRHNQDQ------FSEEDLAAFQIAMDDDEQEANTINDTEEDNGQDISGMSYEAMLQLGERIGDVKTERWARRAQKTIDTLPIIKFDREKINNKTNTNQC--DTKCLICQEEYCTGEDLRQLPCRHCFHQECVDQWLLTKDFCPYCRTSL 243          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: A0A7S3Q5R0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5R0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.460e-18
Identity = 65/138 (47.10%), Postives = 80/138 (57.97%), Query Frame = 1
Query:  307 EADIRAMRLAMGEEQEDDGGMGEGEE-EEGDEETPME--YDALLELGEAIGDVKQERWRLRAPAAIARLPRKR-AAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 708
            E D+ A+R  M EE       G+G+E EEGD E+  E  YDALL+LGE IGDVKQERW +RA   IA+L  K    A   G     A   D KCLVC   YE GE++  LPC H +H+ CV  WL   D CP C++ +
Sbjct:  280 EEDLAALRAIMAEESPIVEEHGDGDEFEEGDYESDEELSYDALLDLGERIGDVKQERWAVRAADEIAKLTCKTFCKAMGEGKDENDA---DVKCLVCQFAYEEGEKVTILPCRHYFHSECVGQWLGAKDFCPYCRQCI 414          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: A0A7S4HU52_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HU52_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 3.030e-18
Identity = 71/187 (37.97%), Postives = 91/187 (48.66%), Query Frame = 1
Query:  151 GETEEERVMRELQESXXXXXXXXXXXXXXSYQAGMDALRAAQGMGGWDEGMGEADIRAMRLAMGEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKR-AAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 708
            GET E+R     +ES              SY    D LR             E D+ A+  AM EE  DD  +GE  +        + YDALL L E IGDVKQERW ++A   I  LP  +  +A S G     + +   KCLVC C+YE G+ L  LPCGH +H  CV  WL+  D CP C++S+
Sbjct:  143 GETAEDRRRXXXEESEALARHLMAEEAFASYNISTDFLRNNADQ------YSEEDLAALEAAMAEE--DD--VGEEIDVADQPSEELSYDALLRLSERIGDVKQERWTMQAEKHIKSLPTVQFVSAISQGKDENDSAV---KCLVCQCQYEEGDILRNLPCGHCFHRECVDPWLSTKDICPYCRQSI 316          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: A0A7S3L9V5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9V5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.180e-18
Identity = 49/105 (46.67%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  394 DEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSV 708
            D+E  + YDALL LGE IGDV+ ERW ++A   I RLP +   A +  A  AA   ++ KCLVC  EY+  E+L  LPCGH +HA CV  WL   D C  C++ +
Sbjct:  110 DDEAELSYDALLSLGERIGDVRTERWAMKAQTHIDRLPLETYDASAVDARGAADNDSEVKCLVCQHEYQHQEKLRRLPCGHIFHAECVDQWLQTHDDCLYCRKCI 214          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: A0A7S4DPM3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DPM3_9EUKA)

HSP 1 Score: 87.4 bits (215), Expect = 4.420e-17
Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 1
Query:  409 MEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHDYHASCVAAWLARADACPLCKRSVC 711
            M ++ L+ELG  IG VKQ+ W  +A   +A LP  +                  KCLVC CEYEAGE L  LPC H +H  C++ WL +   CPLCKRS+C
Sbjct:  127 MTHEELVELGNRIGSVKQQTWEEKAAQTVANLPTMKFTGEGK--------FCGEKCLVCQCEYEAGEFLKCLPCNHAFHNGCISDWLRQNPECPLCKRSIC 219          
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Match: A0A5A8CA03_CAFRO (RING-type domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CA03_CAFRO)

HSP 1 Score: 85.5 bits (210), Expect = 1.620e-15
Identity = 62/163 (38.04%), Postives = 88/163 (53.99%), Query Frame = 1
Query:  259 ALRAAQGMGGWDEGMGEADIRAMRLAMGEEQEDDGG--------------MGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPAAIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAG-EELMALPCGHDYHASCVAAWLARADACPLCKR 702
            AL + +G GG D  + E    +++L M E Q  +GG              + + + EEG     M YD LL+LGE +GDV++ERW+ RAPA IA LPR        GA + +    +  C +C CE+EAG E+++ LPCGH++H  C   WL   D CP  +R
Sbjct:  217 ALASMRGQGGAD--VDEDTRLSLQLMMAEVQALNGGDEEQMARLAEAAEVVADADAEEGAAADGMGYDELLQLGEQLGDVRKERWQARAPALIAALPR--------GAWSGSG---EPMCAICRCEWEAGAEDVLKLPCGHEFHEDCGGHWLKDNDTCPRKRR 366          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|88987 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9F1_9STRA4.720e-138100.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
K0RAC2_THAOC1.350e-2546.84RING-type domain-containing protein n=1 Tax=Thalas... [more]
D7FY13_ECTSI8.870e-2339.13Ring finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A7S2YQL4_9STRA2.550e-2036.67Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1E7FQW7_9STRA4.810e-2036.76RING-type domain-containing protein n=1 Tax=Fragil... [more]
A0A7S3Q5R0_9STRA2.460e-1847.10Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4HU52_9STRA3.030e-1837.97Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3L9V5_9STRA9.180e-1846.67Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S4DPM3_9EUKA4.420e-1743.56Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A5A8CA03_CAFRO1.620e-1538.04RING-type domain-containing protein n=4 Tax=Cafete... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:647997..650075 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|88987|CE88986_32
DescriptionRING-H2 zinc finger domain
COG categoryO
Max annot lvl2836|Bacillariophyta
EggNOG OGsKOG0800@1|root,KOG0800@2759|Eukaryota,2XDCR@2836|Bacillariophyta
Evalue3.95e-27
Seed ortholog159749.K0RAC2
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-08_004670.1
TranscriptId89309
TrackFilteredModels1
ProteinId88987
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|88987gene_10588Tribonema minus UTEX_B_3156 geneContig_74 647997..650075 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|88987Trimin1|88987|CE88986_32Tribonema minus UTEX_B_3156 polypeptideContig_74 648076..650036 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10588_4exon_10588_4Tribonema minus UTEX_B_3156 exonContig_74 647997..648321 -
exon_10588_3exon_10588_3Tribonema minus UTEX_B_3156 exonContig_74 648817..648933 -
exon_10588_2exon_10588_2Tribonema minus UTEX_B_3156 exonContig_74 649370..649477 -
exon_10588_1exon_10588_1Tribonema minus UTEX_B_3156 exonContig_74 649830..650075 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10588UTR3_10588Tribonema minus UTEX_B_3156 three_prime_UTRContig_74 647997..648075 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10588CDS_10588Tribonema minus UTEX_B_3156 CDSContig_74 649830..650036 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_10588UTR5_10588Tribonema minus UTEX_B_3156 five_prime_UTRContig_74 650037..650075 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10588 ID=mRNA_10588|Name=jgi.p|Trimin1|88987|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=796bp|location=Sequence derived from alignment at Contig_74:647997..650075- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGATCTTATCAACACCGGGCAAGAGACCGCGAGACGACATGTCGTCGCC
GTCGCCTGAAGGGCTCGCGTGTATCGGGAGGACATTCACATCCGCTGGCG
GCAGCGCACCCGGCACACCCGAGCCTGCACCAAAGTCCGCTCGATCATCC
GGCGAAACAGAGGAGGAGAGAGTAATGCGCGAGCTGCAGGAATCCGAGGC
TCTCGCTCGAGAGCTCATGGAGTCAGAAGCCCTGGCGTCTTATCAGGCTG
GCATGGACGCGCTGCGCGCCGCGCAGGGCATGGGCGGCTGGGACGAGGGC
ATGGGCGAGGCTGACATCAGAGCCATGCGCCTGGCCATGGGCGAGGAGCA
AGAGGATGACGGCGGCATGGGGGAGGGCGAGGAGGAGGAGGGGGACGAGG
AGACTCCTATGGAGTACGACGCGCTGCTGGAGCTGGGCGAGGCTATCGGC
GATGTAAAGCAGGAGCGATGGCGCCTCCGCGCGCCCGCGGCGATAGCGCG
GCTGCCGCGCAAGCGCGCCGCGGCGCGCAGCCCCGGCGCCGCCGCCGCCG
CCGCCTGCATCACCGACGCCAAGTGCCTCGTGTGCATGTGCGAGTACGAG
GCGGGCGAGGAGCTCATGGCGCTGCCGTGCGGCCACGACTACCACGCGTC
GTGCGTCGCCGCGTGGCTCGCGCGCGCAGACGCGTGCCCGCTGTGCAAGC
GCAGCGTGTGCGGCTGACGCGGCCGCGCTTGTGCGGCGGCGGCCACGGCG
GCGGTACTGGAGCGGGGGCCGGCGCGTCCTTCTCGTCTTCATGAAA
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protein sequence of jgi.p|Trimin1|88987

>Trimin1|88987|CE88986_32 ID=Trimin1|88987|CE88986_32|Name=jgi.p|Trimin1|88987|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=226bp
MSSPSPEGLACIGRTFTSAGGSAPGTPEPAPKSARSSGETEEERVMRELQ
ESEALARELMESEALASYQAGMDALRAAQGMGGWDEGMGEADIRAMRLAM
GEEQEDDGGMGEGEEEEGDEETPMEYDALLELGEAIGDVKQERWRLRAPA
AIARLPRKRAAARSPGAAAAAACITDAKCLVCMCEYEAGEELMALPCGHD
YHASCVAAWLARADACPLCKRSVCG*
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mRNA from alignment at Contig_74:647997..650075-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10588 ID=mRNA_10588|Name=jgi.p|Trimin1|88987|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2079bp|location=Sequence derived from alignment at Contig_74:647997..650075- (Tribonema minus UTEX_B_3156 )
GCGATCTTATCAACACCGGGCAAGAGACCGCGAGACGACATGTCGTCGCC GTCGCCTGAAGGGCTCGCGTGTATCGGGAGGACATTCACATCCGCTGGCG GCAGCGCACCCGGCACACCCGAGCCTGCACCAAAGTCCGCTCGATCATCC GGCGAAACAGAGGAGGAGAGAGTAATGCGCGAGCTGCAGGAATCCGAGGC TCTCGCTCGAGAGCTCATGGAGTCAGAAGCCCTGGCGTCTTATCAGGTAC GTAGCACGGCGAGGCTGTGCTATGTCGTCCCGCACGAACGCTTTGCTAAG CGACACTGGAGCAGTGGCTTATTGAATGTTGCAGCAGCTGGCTCACGTGC GCAGCCTGTTCAAGAGAGCACCTGCTCAACCTCGCCGTCGCTGCTAGACT TTAATCTCATGATTTACATGCACTACATATTGTGTATCAGATGGCCACAG GCGCCGACATGACAGTGTGGCAGCAGCGCAATTGCCCTCTACTTGGCGGT CACTATCTTCATTGCAGTGGCTTTGAAGATTTATCAAAGCCACCACACAC GCAGTCAATTAAATGCGCTGGTGCCTGCTGTGACCGCCGCGCGCACAGGC TGGCATGGACGCGCTGCGCGCCGCGCAGGGCATGGGCGGCTGGGACGAGG GCATGGGCGAGGCTGACATCAGAGCCATGCGCCTGGCCATGGGCGAGGAG CAAGAGGTGCGTATGTAGGTAACATCACAAACACACACACACACACTCGA AGGGCGGTATGCGGAGGCGCGCAGGCGCTGCGCTACGGGGGGGCGGCACC CGCGCCGCCGCCGCCCCCCCTTTTGTGGCTGTGCGGAAACGCGGCGCAAG TGCGCGCCGCGGCGTGCCGCCATCGGCGCGTGAATGGTGTGCGGTGAAGC GCATCGAGGTGATGCGCTTCAACTGCCGGCGTGTGACGTGCCGCTGAGTG CTGCTGCCTCTGTGTGAGCGCCCACTGCTAGGAGCTGCCGCGGCGCCGCG GCAGCACTCATCCGGAATCACGAGCCTGCCTGCACGCCTGTCAGTGTCCA CTAGCGCGGTCAGATGTCTGGTCCGTACTGCATTTCATGGCGTAGCGCCG CTCACGATACACGCGCACTGCCGCACCTCTGACGTGGCGCAGGATGACGG CGGCATGGGGGAGGGCGAGGAGGAGGAGGGGGACGAGGAGACTCCTATGG AGTACGACGCGCTGCTGGAGCTGGGCGAGGCTATCGGCGATGTAAAGCAG GAGCGATGGGTGAGAGGCGCGGTTGTGCTCGGGATGATGGGGCTTGGTTG GAAAATCAGAGTGCTCGCCGAGCGCGCGGTAGGAGCAATTGCCAGATGTC ATGCCAGTGAGGCTAGAACAGCTGCTTTCGAGGTTCAAGCCTTGGTCTGA AGCTTGCAGGACGACGCATGAAGTGCTCTGTCACTTGCTCTGCCGCGGCA CGCTTCGCAGTAAATGATTGCGGTGCAAAGGCTGCTTTTGACAGATGCTT GCATCTTCTTTTCATGCTAGTTCCACCCTGCACTTGTGGCATTCGTGTGC GCATGGTTGTGTTCATGTATGCTAGGCTCTCGTGCGTGCATCCACTACAC TGTACTGAGCACTGCTTGGCACGCGCGACCCTCACGGCAGTCTTTCTGTT CCCACCACAACACCACAAAGAAGAACAGCAGTCACTCGCTGCTGCCCCAC CCGCTCATACTGCCCCTGCGCTGTCTGCATCACCGCCTTTGCCGCGCCCT GCAGCGCCTCCGCGCGCCCGCGGCGATAGCGCGGCTGCCGCGCAAGCGCG CCGCGGCGCGCAGCCCCGGCGCCGCCGCCGCCGCCGCCTGCATCACCGAC GCCAAGTGCCTCGTGTGCATGTGCGAGTACGAGGCGGGCGAGGAGCTCAT GGCGCTGCCGTGCGGCCACGACTACCACGCGTCGTGCGTCGCCGCGTGGC TCGCGCGCGCAGACGCGTGCCCGCTGTGCAAGCGCAGCGTGTGCGGCTGA CGCGGCCGCGCTTGTGCGGCGGCGGCCACGGCGGCGGTACTGGAGCGGGG GCCGGCGCGTCCTTCTCGTCTTCATGAAA
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Coding sequence (CDS) from alignment at Contig_74:647997..650075-

>mRNA_10588 ID=mRNA_10588|Name=jgi.p|Trimin1|88987|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=678bp|location=Sequence derived from alignment at Contig_74:647997..650075- (Tribonema minus UTEX_B_3156 )
ATGTCGTCGCCGTCGCCTGAAGGGCTCGCGTGTATCGGGAGGACATTCAC
ATCCGCTGGCGGCAGCGCACCCGGCACACCCGAGCCTGCACCAAAGTCCG
CTCGATCATCCGGCGAAACAGAGGAGGAGAGAGTAATGCGCGAGCTGCAG
GAATCCGAGGCTCTCGCTCGAGAGCTCATGGAGTCAGAAGCCCTGGCGTC
TTATCAGGCTGGCATGGACGCGCTGCGCGCCGCGCAGGGCATGGGCGGCT
GGGACGAGGGCATGGGCGAGGCTGACATCAGAGCCATGCGCCTGGCCATG
GGCGAGGAGCAAGAGGATGACGGCGGCATGGGGGAGGGCGAGGAGGAGGA
GGGGGACGAGGAGACTCCTATGGAGTACGACGCGCTGCTGGAGCTGGGCG
AGGCTATCGGCGATGTAAAGCAGGAGCGATGGCGCCTCCGCGCGCCCGCG
GCGATAGCGCGGCTGCCGCGCAAGCGCGCCGCGGCGCGCAGCCCCGGCGC
CGCCGCCGCCGCCGCCTGCATCACCGACGCCAAGTGCCTCGTGTGCATGT
GCGAGTACGAGGCGGGCGAGGAGCTCATGGCGCTGCCGTGCGGCCACGAC
TACCACGCGTCGTGCGTCGCCGCGTGGCTCGCGCGCGCAGACGCGTGCCC
GCTGTGCAAGCGCAGCGTGTGCGGCTGA
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