mRNA_2540 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|85873
Unique Name	mRNA_2540
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A836C9B7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B7_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 2.270e-185
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1

Query:  112 MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFASPPQGEP 1116
            MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFASPPQGEP
Sbjct:    1 MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFASPPQGEP 335

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BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A835YZ99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ99_9STRA)

HSP 1 Score: 239 bits (610), Expect = 6.420e-70
Identity = 176/386 (45.60%), Postives = 214/386 (55.44%), Query Frame = 1

Query:    1 GAASASGNLSAFPWREAPAAVSGLSKLVRGFRAELSLMGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIV-GAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHE----------LVEMWRSMVALARRSA-----TLTETEMKAAIDED-MQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRL--HSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFASP 1101
            GAAS SGNLS+FPWREAPAAVSGL+K  R ++AE  +M +L G AS+  Y   E+  GG  AF ACAAAIF+T QPLQA+V G  DS                                      A+AG  XXXXXX       T                      D G AD + DLRAVMEE LADFYA+AAAQA+  GLAPCY LH IV   +VG G+ +GA RGD  DPR   HE          +   +R +    RR       +L+  E +A I ++ + R M R+ ++TVHVD+Q +CRETFFVR TAT  IVQGSDA+ TR H VRLE+TQRR    +   A LE+  K    WSD++WQVIDIDGWL GN +F  P
Sbjct:  212 GAASTSGNLSSFPWREAPAAVSGLTKAYRNYKAEFRVMKRLGGGASSW-YTAREIPKGGAVAFRACAAAIFQTGQPLQALVKGKADSRDGGAGGSSTFTPSDGSPSGRSSIRGGVRSGNVA---PAKAGGXXXXXXXSVLSTADT----------------------DTGEADMKLDLRAVMEENLADFYASAAAQASARGLAPCYALHDIVDVTIVGTGMVEGAVRGDAFDPR--IHEDSGMKVFLRNMGNAFRQIYPTRRRRGGPGPVSLSVAEQEAIIQKEVLDRMMSRQRIRTVHVDLQLVCRETFFVRKTATGAIVQGSDAVETRTHQVRLESTQRRPVPSAFDLAALEAASKV---WSDINWQVIDIDGWLDGNDMFVLP 566

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BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A836CA16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA16_9STRA)

HSP 1 Score: 230 bits (587), Expect = 4.190e-65
Identity = 211/394 (53.55%), Postives = 247/394 (62.69%), Query Frame = 1

Query:    7 ASASGNLSAFPWREAPAAVSGLSKLVRG----------FRAELSLMGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGG---------KSAQAGAQXXXXXXXXXXXXXTGXXXXXXG-ADGDAEKAPGASAADAGGADAE-FDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESV--LKRELD-WSDVDWQVIDIDGWLGGNPLFASPPQGEP 1116
            ASASGNLSAFPWR+APA V+GL+K  R            R  L+ +     A S   Y   EL  GG+AAF ACAAAIF+TKQPLQ +   +++G+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +SAQ GAQ         XXXX  XXXXXX  ADG+AEK P A AADA GA +   D  AVME KLADF+AAAAAQAALSGLAPCYVLHG+V A  V     +G ARGD +D       LV++WR                 K   D         E ++T+HVDV  +CR+TFFVR+TATD IVQGSDA+ TR H VRLETTQRR +   +  +E     K+E D W+D+DWQVIDID WL GN ++A P   EP
Sbjct:  381 ASASGNLSAFPWRDAPAPVAGLAKFARTPFLSPRAAMHLRVSLAFVLDTEPATSALRYFMYELPGGGEAAFRACAAAIFQTKQPLQTLA-VDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSAQTGAQSSEAAPVDSXXXXXXXXXXXXAEADGNAEKGPEAHAADAAGAGSGGLDPHAVMEPKLADFFAAAAAQAALSGLAPCYVLHGVVDAAAVRVTSVRGLARGDTYDAARGLPPLVQLWRK----------------KGGDD-----IFSAERIRTLHVDVDIVCRDTFFVRETATDAIVQGSDAVQTRTHRVRLETTQRRTYVPEDFDMERPWEFKKEWDVWTDLDWQVIDIDDWLDGNSMYA-PAAPEP 751

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BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A836CHA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA6_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.050e-36
Identity = 142/328 (43.29%), Postives = 173/328 (52.74%), Query Frame = 1

Query:  172 GGKAAFCACAAAIFRTKQPLQA--IVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASA----------ADAG-GADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSA---TLTETEMKAAI--DEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHS---IREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLF 1092
            G +AAF AC AAIF+TKQPL A  +    +SG+XXXXXXXXXXXX   XXX             +G +  +AGAQ              G         G A   P A A          ADA  G  A FDL AVME+KLADFY++AAAQA+ SGL   YVLH +  A V  A V +GA RG+  D       L  +W       R SA   +LT  ++K     DE+ +  +RR    T   +V  +CRETFFV+D AT  IVQGSDA   R H +RLET QR L     +     E + K    +SDVDW+V+DIDGWL GNPLF
Sbjct:  154 GAEAAFRACTAAIFQTKQPLHAPSVDAVNNSGAXXXXXXXXXXXXMPAXXX-------------KGRQGVKAGAQK-------------GKAAPARRGGGSAPARPAAQARAAHQKPKVHADAAEGTRAHFDLCAVMEDKLADFYSSAAAQASASGLVLHYVLHDVRGAVVTDARVIRGALRGEQPDSF-----LRRLWALSKISLRLSAAHPSLTPAQLKPIFRQDEEYKAAIRRSINHTAQAEVHLVCRETFFVQDAATGAIVQGSDAEKMRMHRIRLETGQRLLQMPKVVSPEAAEGLYKN--GFSDVDWKVVDIDGWLDGNPLF 448

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BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A836CD11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD11_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.340e-25
Identity = 83/200 (41.50%), Postives = 104/200 (52.00%), Query Frame = 1

Query:  508 GADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSA---TLTETEMKAAI--DEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLF 1092
            G  A FDL AVME+KLADFY++AAAQA+ SGL   YVLH +  A V  A V +GA RG+  D       L  +W       R SA   +LT  ++K     DE+ +  +RR    T   +V  +CRETFFV+D AT  IVQ     A                       E + K    +SDVDW+V+DIDGWL GNPLF
Sbjct:   78 GTRAHFDLCAVMEDKLADFYSSAAAQASASGLVLHYVLHDVRGAVVTDARVIRGALRGEQPDSF-----LRRLWALSKISLRLSAAHPSLTPAQLKPIFRQDEEYKAAIRRSINHTAQAEVHLVCRETFFVQDAATGAIVQVVSPEAA----------------------EGLYKN--GFSDVDWKVVDIDGWLDGNPLF 248

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BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A7S3UY89_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY89_HETAK)

HSP 1 Score: 60.5 bits (145), Expect = 4.780e-7
Identity = 33/85 (38.82%), Postives = 44/85 (51.76%), Query Frame = 1

Query:  838 TVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDV-DWQVIDIDGWLGGNPL 1089
            TV VDV   C+E F V+D  T  I+QG++A+ T  H +               TLE+V      W  + DW V+D+DGWL GNP 
Sbjct:  130 TVQVDVDVTCQELFMVKDKPTGVILQGAEALGTVVHRL---------------TLEAVFLPGEGWRMLEDWLVVDVDGWLEGNPF 199

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|85873 vs. uniprot

BLAST of jgi.p|Trimin1|85873 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6


Match Name	E-value	Identity	Description
A0A836C9B7_9STRA	2.270e-185	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YZ99_9STRA	6.420e-70	45.60	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CA16_9STRA	4.190e-65	53.55	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHA6_9STRA	2.050e-36	43.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CD11_9STRA	1.340e-25	41.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S3UY89_HETAK	4.780e-7	38.82	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_7	contig	Contig_7:635019..641585 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|85873\|CE85872_59
Hectar predicted targeting category	other localisation
TranscriptId	86195
Track	FilteredModels1
ProteinId	85873

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|85873	gene_2540	Tribonema minus UTEX_B_3156	gene	Contig_7 635019..641585 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|85873	Trimin1\|85873\|CE85872_59	Tribonema minus UTEX_B_3156	polypeptide	Contig_7 635099..640667 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_2540_5	exon_2540_5	Tribonema minus UTEX_B_3156	exon	Contig_7 635019..635302 -
exon_2540_4	exon_2540_4	Tribonema minus UTEX_B_3156	exon	Contig_7 636982..637110 -
exon_2540_3	exon_2540_3	Tribonema minus UTEX_B_3156	exon	Contig_7 639010..639249 -
exon_2540_2	exon_2540_2	Tribonema minus UTEX_B_3156	exon	Contig_7 640233..640677 -
exon_2540_1	exon_2540_1	Tribonema minus UTEX_B_3156	exon	Contig_7 641485..641585 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_2540	UTR3_2540	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_7 635019..635098 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_2540	CDS_2540	Tribonema minus UTEX_B_3156	CDS	Contig_7 640233..640667 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_2540	UTR5_2540	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_7 641485..641585 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_7:635019..641585-
coding sequence from alignment at Contig_7:635019..641585-

spliced messenger RNA

>mRNA_2540 ID=mRNA_2540|Name=jgi.p|Trimin1|85873|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1199bp|location=Sequence derived from alignment at Contig_7:635019..641585- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCGCCGCGAGCGCGAGCGGGAATCTCAGCGCGTTCCCGTGGCGCGAGGC
GCCGGCGGCGGTGTCGGGTCTCAGCAAGCTTGTGCGCGGCTTCCGCGCAG
AGCTCAGCCTGATGGGGAAGCTGCGCGGCGCTGCATCCACGCCGTCGTAC
ATCAACTCGGAGCTCGCCAGCGGCGGCAAGGCGGCGTTCTGCGCGTGCGC
CGCGGCCATATTCCGGACCAAGCAGCCGCTGCAGGCGATCGTCGGCGCCG
AGGATAGCGGCAGCAGCGGCGGCAGCAGCCGGCGCCGCCGCAGCGCCCCG
CCTGATGGCGAGAAGGGCTCGGCGGCGGGCGGCGGGGCAGGACCGGCGGC
AGCGGTGGAGGGGGGAAAGAGCGCGCAGGCAGGGGCGCAGAGCAGCAGCG
GCGCGGCGCCTGCAGAGAGTGGCGGCGGCACTGGTGCGGCAAGCGCAGCG
GCGGGAGCGGATGGCGACGCTGAGAAGGCGCCGGGGGCGAGCGCTGCTGA
CGCGGGAGGCGCAGACGCGGAATTCGATCTTCGCGCGGTGATGGAGGAGA
AGCTCGCCGACTTCTACGCCGCCGCGGCGGCGCAGGCGGCGCTGAGCGGC
CTCGCCCCGTGCTACGTGCTGCACGGCATCGTGAGCGCGGACGTGGTTGG
CGCGGGCGTCCAGAAGGGCGCCGCGCGCGGCGACCCGCACGACCCCCGCG
GGGACCCTCACGAGCTAGTGGAGATGTGGCGGTCGATGGTGGCGCTGGCG
CGGCGCAGCGCGACGCTCACCGAGACGGAGATGAAGGCGGCGATAGACGA
GGACATGCAGCGATTCATGCGCCGCGAGAGCGTCCAGACAGTGCACGTGG
ACGTTCAGTGCATTTGCCGCGAGACGTTCTTCGTGCGCGACACGGCGACC
GACACCATCGTGCAGGGCAGCGACGCGATAGCCACGCGTGCGCACCACGT
CCGCCTCGAGACGACGCAGCGCCGGCTGCACTCCATCAGGGAGGCAACGC
TGGAGTCGGTGTTGAAGCGCGAATTGGACTGGTCCGACGTCGACTGGCAA
GTCATTGACATCGACGGGTGGCTGGGCGGGAACCCCCTGTTTGCGTCGCC
GCCACAGGGGGAACCGTGACTTGCCGCCCATGACGCGGCTTTGCGCTCGC
TATGTAATGAAGCAAATGGCGGAGAGGCGCTAGCGCCGCCGTGCAGCTG

protein sequence of jgi.p|Trimin1|85873

>Trimin1|85873|CE85872_59 ID=Trimin1|85873|CE85872_59|Name=jgi.p|Trimin1|85873|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp
MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSG
SSGGSSRRRRSAPPDGEKGSAAGGGAGPAAAVEGGKSAQAGAQSSSGAAP
AESGGGTGAASAAAGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLAD
FYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPH
ELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQC
ICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESV
LKRELDWSDVDWQVIDIDGWLGGNPLFASPPQGEP*

mRNA from alignment at Contig_7:635019..641585-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2540 ID=mRNA_2540|Name=jgi.p|Trimin1|85873|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6567bp|location=Sequence derived from alignment at Contig_7:635019..641585- (Tribonema minus UTEX_B_3156 )
GGCGCCGCGAGCGCGAGCGGGAATCTCAGCGCGTTCCCGTGGCGCGAGGC
GCCGGCGGCGGTGTCGGGTCTCAGCAAGCTTGTGCGCGGCTTCCGCGCAG
AGTGAGTCGTTGCTGCGCGCGCGGGTCGCCGTGACGCGTGGGCGCCGGCT
GTGATTGCCGCGTAGGGGGGGGGGGAGTGGCCCCGGTGGTCGCGCACAGA
TGGTTGGGCTTGTCAGCTTCGGAGGCGTACTGCAGTGTCTCGTCAATCAC
CGGTCCACATCCTCATGGCCTCCTCTCTGCCGCCCAATCATCTGTGCGCA
CCCAGGCGCTGCCGACCCCCCTTTCAACCCCTCAACACCCCTTCAGTCGA
GCACGACTGGTGATTGCATGAAGTGCGGACGGGAGGCTTGCAGCACGCCT
CAGCTGCTGCCGCACTGTGCCTGTCCCGTTGGGCATTCTCGCGCTGTCAT
GCTTCATCGGCGATCGCAGCGCAGCACCGGCAGCAGCGGTGGCGTCAGCG
CCGCAGGGGCCTTGCGGCCGTGCACGCGTGCGACCTCTGATGACAGAACC
AGACATCACACGTTTGTCCCGCAATGTGCGCCTGATAGCGCTGACGCGCG
GCCGATGTGCACGGGGGGCTCTGCTATGTGCGGTTTTGCAGACATGGTCG
TCAGCATCTCCCTTCTGGGGGGGAGGAAGGGGGAGGGGGGGGGGTGGCAT
GTGATGGTAAAGCACAGTCAGGCACTTTGACTAACCCAGCCCGCCATGCC
TGCGACCAGCAGAGGTAGCTGCGTAAGACACTGGCGCACATCACGCATGC
TGGCAGATCAGTCGCGTGGCATGCGCGCAGACGCCAGCTGAACGCAGCTG
TAAGCACCACGCTAGAGGCGCACTTTGTGCTGAGCCGTGCCCTCGCGCAA
TCGCGCAGGCTCAGCCTGATGGGGAAGCTGCGCGGCGCTGCATCCACGCC
GTCGTACATCAACTCGGAGCTCGCCAGCGGCGGCAAGGCGGCGTTCTGCG
CGTGCGCCGCGGCCATATTCCGGACCAAGCAGCCGCTGCAGGCGATCGTC
GGCGCCGAGGATAGCGGCAGCAGCGGCGGCAGCAGCCGGCGCCGCCGCAG
CGCCCCGCCTGATGGCGAGAAGGGCTCGGCGGCGGGCGGCGGGGCAGGAC
CGGCGGCAGCGGTGGAGGGGGGAAAGAGCGCGCAGGCAGGGGCGCAGAGC
AGCAGCGGCGCGGCGCCTGCAGAGAGTGGCGGCGGCACTGGTGCGGCAAG
CGCAGCGGCGGGAGCGGATGGCGACGCTGAGAAGGCGCCGGGGGCGAGCG
CTGCTGACGCGGGAGGCGCAGACGCGGAATTCGATCTTCGCGCGGTGATG
GAGGTAAGGAGAGCCTGACCCTAGCCCTGACCCTATACGTCACGACGGGC
CAGAGCAGTCAAGTGCGCGAGCGTCTGCTGCAGGACAGGCCGCAGCTGAG
TGGCACCTTGACGGTGCTGAAGGTGGCCAAGATGGGTCACATAACCCGCC
CCATGACATCCCTCAATGTGCAGACACGGCTGGGCCTTCAGGGTGTTGAC
TCATATGAAACGCATCCCGACCGCATCTATGATATGCTTCGAAGTGCGCC
ATTGCGTCACTGTGGCGTTTCTGTCTGTCGCGTCGAGCGTCATTGTTGAG
CTGGTACAGCCAGCTCTAAGCGGCATGAAGAGAGCGTCTCTGTCCACAAT
CGCCCCAGGCGCGGCATATGCGCTCAGTGGCGCGTCAACGGCGGCAACAG
CTTGCCATTGCGGGCACCAATTTGTTTCTGCTGATGAACTGCGACCGTCT
GAGTGCAGAAGGGGGGGACAATCGCTTCCCGGGATCTCTGCACAACGAGA
ATTGTGCGTCAGTGTTTGAAATTGGGCACCATGTCAAGGCTGTATGCACC
CCCCCCCCCCCCCCCCCCCCCGCGCGCTCTGTTTGTCAGCGAACCTGCAC
CCTGCCGGGCATGCTTCTCGTGCCCTGCAAGTATTGTGAGATTTGGTGGG
CGTAAACAAAAACAGCATGTGTGCAGCTTCACTACGATATCAATATCGCA
TGTGTACCGAGATGCGTTGCATCGACAACATCCGCGCCCATCCCCCCCCC
CCCCCGTGCCGCCGATACCCGGGCGCACATCAACAAGCTGCGCTGCGCAA
CGAGCCGATTCGGCAAAGCACGCACCGACGCAGGCAGCCTCTCCGATCAT
CAAGGCAATGTTCTGTAGTCCACACCCCTCAGTCTGCACCTAGCTGATCC
TGTTGGCACTGGGCCCAGCTGATCCTGTCGGCAACTCTGCACCGCGCGCT
GCTCCCCTCCGCGCGCCGTTGCCGCCGCCGCCGCAGGAGAAGCTCGCCGA
CTTCTACGCCGCCGCGGCGGCGCAGGCGGCGCTGAGCGGCCTCGCCCCGT
GCTACGTGCTGCACGGCATCGTGAGCGCGGACGTGGTTGGCGCGGGCGTC
CAGAAGGGCGCCGCGCGCGGCGACCCGCACGACCCCCGCGGGGACCCTCA
CGAGCTAGTGGAGATGTGGCGGTCGATGGTGGCGCTGGCGCGGCGCAGCG
CGACGCTCACCGAGACGGAGATGAAGGTGCGATCTGCCAAGTTGGGTTGA
AGTGACAACTCATTGTTCAAATTGTTTATGCGTGCGTGCGTGCGCACGCG
CGCGTGCGCGGGGCTGGGGGGTGTTGGTTGGAGATAGGGAAGCAAGAGAG
CTCGTTCCAAGCTGGTCGTTCGCTTTCGAGCTGTGTCGCACGATGAGCTC
GCAGGTTCTGGCGGCAAGCCTGCGCATCTGGGCTTTTTCATGCCCTGAGC
GAGAATCAACGACCGTTACACGCGTTATTACTTGTGAGGATAAGTGCACG
AGTACAGGGCGGGGCGCCCTCGCCTGCTCGATTTTGATTTACGGTTACGG
CTGGCGCCACGCCCACCGTGACTTGTTGCAGCCCGCTGGCGCCGCAGGGC
AGGCAGGCGCGCGCCGCGCGACAATCTGCTATCCCTGCGCCTCCATAAAC
TTCAGAGAAAGCACGATCTCTGCGGCGCCCGCCGCCATTTGCGGTCATCG
CCGCCGCACTCACCTCGCCAGTGGGTCAGTCACTCACTGGTCAGATGTCG
CCAGGTGCGGTCATGTGTAGCCTAATACCAGTGCATGCTCCGCACCGTTG
CCAGCAGGCCGGTCGATCAGAGGCTACACATGGAAAACTGTTCCTGAAAG
CCCGTTCACCCCCCCCGCGGCGCGTGAACAATAATTGAACCAAGGGGGGA
TTCAAACGCAAAGCAGAAGCAGGTAGGCATCGATCAATGTTGTGGAGCGC
TGACGTCGGGGGGTGCGTGCCTACCTACCCCCACCGCCATTGCCGTGGCC
TTGCTCAGGCACTCCGCCGCTCCCGCAAGCTGCGGGGCGGTGGAGTGGCA
TCAATTGATGACATTGAATGACCTGGTTGTATGATGTGGCGAGCTTGTAT
AGCTGCCCAGCATTGTGCCACGTCACTTGAAGGTGAGTCCAAGGAGCCTG
TTGTTGAAGTTGCCCATGATCTGACCTCGGGCAAAAAAACTTACATCCAG
CCCCTCAAGTTCATCATCCCCCCCGCGACCCTTCGTCCTTTGGCTACTTG
AACTTGCGGTGCCCACCCCATGTCAAGCCCACAGACCTACCCCTCTGCCA
ATGTCGTGGCTGCAATGCGTCAGCGGACATGCCGCACTAACAACATGTGC
TGATGAACCTGCTTCAAAGGCCTCGCAATGGCATGGCCCATGTGCCCCCC
CCCCCTCTCGTGACACCTACAGCTGGCCGACACACAGAGCAACAATCGTT
CAAAGGGCACATCGGGAACGTTCCCTTTTGCACGTTCCCTTTTGCTAATG
ATTTGCCTCTACATCGCTGCTCGAAAGGGCACGCGCTACATAATCGTAGC
CCCGCCAGAAGGCATAGTCTTCGAGGGCTACGAGGAAGGCCCGGACACAT
TGGCAGCGCTCCGTCATCGGAGCCACGGTGGTTTGAGCTGACAGTTTGAC
ACGCGCTTGTCAGCGTAAAGCGTAAGAGATTGTCTGTGGAAGTTTGCAAA
CCGTGTTGGTTTCGGCAAGAAAAACTCTGCCCTAGTTGACTGCCAAATTG
AACTTTCCTATGAAGCACATCGCCACAGACGGCGCTGCCAAGAACTTCCA
CAGACAAGGTCTAGCCTTTGGCCTTCGCCACCTCTCTTGCAAGTCGCAGC
AGCGAACTCGGCGAATTGGTTGACGGACGTCCATTTTGAGAATTGTTTGG
GGGTGTTGCAGCTGTATTCCCGTTTATTTGCGCGTGGCGCCGCGCCGGAA
TAAAGTGTGCACGGCTCAGAGCAGCGGCGCGCCGCTGAATCAGATCTTGG
CTGCCAGTGCCCCACGTTGAGAAAAGGCTTTGCCCTTGCTCCCCTGTTCG
TGTCAACGTCACCGCGTGTCGCCTCGGGCTGGCCCTGACGCGAAGCCCGC
CTCTCGCGCGCCCGTGTGCTGTCAGGCGGCGATAGACGAGGACATGCAGC
GATTCATGCGCCGCGAGAGCGTCCAGACAGTGCACGTGGACGTTCAGTGC
ATTTGCCGCGAGACGTTCTTCGTGCGCGACACGGCGACCGACACCATCGT
GCAGGTGAGACGCGTTGCTCTTGCACTTGCACTCGCGGCTGCGGTTGAAG
TTGGGCGCAGGTCGCATGGTTGCTTCGAGAGCTGGGGGCGACTACTGAAG
CCGCCATCGTGCAGTTGAGTCGTCGCGGTGCTGCACACACTTGCACTTGC
GGTTGCAGTTGAACTTGGGCGCTGCATCGCATGGTGACTACGAGAGCTGG
GGCGGGATGAAACAGCTCTCTCAGACCTGATGATGCGATTCAGTGAATTG
AGTTGAGAGGGGCAGGCGTACACTCTAGCCAACTGAGTTACAAGCCCATA
AATAAAAAGAAATAAATCAGAAAAAAAATGCCCACAATTAATCACAGTCT
CTTGTCCGCCGCCATCCAAGCTATCCGCGCTTTGTGACAGAGCTGCTGAA
CATCACCACAGGCGATTTTCTACATTTTTCCTGTGTTCATGCATGCAGAG
CGTTGCCCTGTGTGGTGTCAAGTAGACGTTGGCGATGCGCGGCTTGCATG
CTGCCCGCCGCACGTATGCATGTACTGGTGAGCTGCGTGCAGATTAAATT
AGTAACAGCGCGCTCAATCGCGAGCGTGACTTCAAGAATCAAGTTCACAG
AGAGCAGCGACAGCAGCCTTTGTGGAGGTGCATGTGCATGGTAGAGGTAC
AAACATGCAGCAGTGATGAGCGCCCTTGTCCGTGTACTTTGGATGCTGAC
GTAGTGTGCAACTTTCAGAGCACAATGAAGTGTTTCATTTCATAATCCGT
CACGCCTGCTGCAAGCGCTGCATTCATCCCACTACATCAGGCACCAGATG
CATCTGCACAAATCGTGTAGCAATTCGAGTATATATATATATATTGCACC
AAGAGGAATACAATACTGACGAGTAAAAATATTAGTGTAGTAGCAGTGAA
ACCTGCTTTCATTGCTCGCGTACAGTAATCATACACTGCATATTTACACT
TCACATTCTGCATCGACGCCTAGACACAACGATGCGACGCACTGCTTGAA
CTCAAGTTCTTCAGTGCTTGAGGTCTGCCATCAGGAAGCCTGCAGCCTGA
ATACACAAGAAGCCGCAGCGCACTTTTGAGCACTGCCATGATGTAACGCC
TTGCAGTACTGCATGTTTAGGCGCACGCTTGCGTCAAGCTTTCGCTCCCC
ATGTACCCAATCACACCATACGCTGGCACCAATGGCATGGTACGTGCGAA
CGGTCTTTCAGCTTGAAAAGAGAGGCCTAAGCTCTGTTTGTGCTGTACCG
AAGGTACGTGGCGGCTGCAGTGCCGGCTGCGACTGCTGCAGAGCGCCAGC
GGCGGCGAAGGCCCGCTCAATTCCAGCACTGCACCACACTCTGAGATCAG
TGCATAGTACACACACGCACGGTGCTGCTTCTGCTGTCTGGCCCTTGTGC
CCTTCTCCTTGAATGACCACCCTCAGCGCTGCCAGGTGAACCATGTCATC
ATGAGAGCTCTACGATCTTTTGATTCGTCTCCATGCAACATGCATGTAGC
ATGTAACATGCAGCAACTTCTTACCATTTGCAGCAGATCTCAGCGCCTCA
CCCAGCTGCTGCCACGGCGCTGCCCGCCGATGGACGCCTCGCGCGGCGCG
CCCCCCCTAACCCTACCCTACCCCTAACCCTAACCCCAATCTCTAACCCT
AACCCTAGCCTCGCTGACCGTGCGCCTCCGCAGGGCAGCGACGCGATAGC
CACGCGTGCGCACCACGTCCGCCTCGAGACGACGCAGCGCCGGCTGCACT
CCATCAGGGAGGCAACGCTGGAGTCGGTGTTGAAGCGCGAATTGGACTGG
TCCGACGTCGACTGGCAAGTCATTGACATCGACGGGTGGCTGGGCGGGAA
CCCCCTGTTTGCGTCGCCGCCACAGGGGGAACCGTGACTTGCCGCCCATG
ACGCGGCTTTGCGCTCGCTATGTAATGAAGCAAATGGCGGAGAGGCGCTA
GCGCCGCCGTGCAGCTG

Coding sequence (CDS) from alignment at Contig_7:635019..641585-

>mRNA_2540 ID=mRNA_2540|Name=jgi.p|Trimin1|85873|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1008bp|location=Sequence derived from alignment at Contig_7:635019..641585- (Tribonema minus UTEX_B_3156 )
ATGGGGAAGCTGCGCGGCGCTGCATCCACGCCGTCGTACATCAACTCGGA
GCTCGCCAGCGGCGGCAAGGCGGCGTTCTGCGCGTGCGCCGCGGCCATAT
TCCGGACCAAGCAGCCGCTGCAGGCGATCGTCGGCGCCGAGGATAGCGGC
AGCAGCGGCGGCAGCAGCCGGCGCCGCCGCAGCGCCCCGCCTGATGGCGA
GAAGGGCTCGGCGGCGGGCGGCGGGGCAGGACCGGCGGCAGCGGTGGAGG
GGGGAAAGAGCGCGCAGGCAGGGGCGCAGAGCAGCAGCGGCGCGGCGCCT
GCAGAGAGTGGCGGCGGCACTGGTGCGGCAAGCGCAGCGGCGGGAGCGGA
TGGCGACGCTGAGAAGGCGCCGGGGGCGAGCGCTGCTGACGCGGGAGGCG
CAGACGCGGAATTCGATCTTCGCGCGGTGATGGAGGAGAAGCTCGCCGAC
TTCTACGCCGCCGCGGCGGCGCAGGCGGCGCTGAGCGGCCTCGCCCCGTG
CTACGTGCTGCACGGCATCGTGAGCGCGGACGTGGTTGGCGCGGGCGTCC
AGAAGGGCGCCGCGCGCGGCGACCCGCACGACCCCCGCGGGGACCCTCAC
GAGCTAGTGGAGATGTGGCGGTCGATGGTGGCGCTGGCGCGGCGCAGCGC
GACGCTCACCGAGACGGAGATGAAGGCGGCGATAGACGAGGACATGCAGC
GATTCATGCGCCGCGAGAGCGTCCAGACAGTGCACGTGGACGTTCAGTGC
ATTTGCCGCGAGACGTTCTTCGTGCGCGACACGGCGACCGACACCATCGT
GCAGGGCAGCGACGCGATAGCCACGCGTGCGCACCACGTCCGCCTCGAGA
CGACGCAGCGCCGGCTGCACTCCATCAGGGAGGCAACGCTGGAGTCGGTG
TTGAAGCGCGAATTGGACTGGTCCGACGTCGACTGGCAAGTCATTGACAT
CGACGGGTGGCTGGGCGGGAACCCCCTGTTTGCGTCGCCGCCACAGGGGG
AACCGTGA