Trimin1|85873|CE85872_59 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|85873
Unique NameTrimin1|85873|CE85872_59
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length336
Homology
BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A836C9B7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B7_9STRA)

HSP 1 Score: 526 bits (1356), Expect = 1.380e-186
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query:    1 MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFASPPQGEP 335
            MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFASPPQGEP
Sbjct:    1 MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFASPPQGEP 335          
BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A836CA16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA16_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.120e-54
Identity = 186/337 (55.19%), Postives = 217/337 (64.39%), Query Frame = 0
Query:   13 YINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGG---------KSAQAGAQXXXXXXXXXXXXXTGXXXXXXG-ADGDAEKAPGASAADAGGADAE-FDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESV--LKRELD-WSDVDWQVIDIDGWLGGNPLFASPPQGEP 335
            Y   EL  GG+AAF ACAAAIF+TKQPLQ +   +++G+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +SAQ GAQ         XXXX  XXXXXX  ADG+AEK P A AADA GA +   D  AVME KLADF+AAAAAQAALSGLAPCYVLHG+V A  V     +G ARGD +D       LV++WR                 K   D         E ++T+HVDV  +CR+TFFVR+TATD IVQGSDA+ TR H VRLETTQRR +   +  +E     K+E D W+D+DWQVIDID WL GN ++A P   EP
Sbjct:  438 YFMYELPGGGEAAFRACAAAIFQTKQPLQTLA-VDEAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSAQTGAQSSEAAPVDSXXXXXXXXXXXXAEADGNAEKGPEAHAADAAGAGSGGLDPHAVMEPKLADFFAAAAAQAALSGLAPCYVLHGVVDAAAVRVTSVRGLARGDTYDAARGLPPLVQLWRK----------------KGGDD-----IFSAERIRTLHVDVDIVCRDTFFVRETATDAIVQGSDAVQTRTHRVRLETTQRRTYVPEDFDMERPWEFKKEWDVWTDLDWQVIDIDDWLDGNSMYA-PAAPEP 751          
BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A835YZ99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ99_9STRA)

HSP 1 Score: 192 bits (488), Expect = 6.210e-53
Identity = 150/349 (42.98%), Postives = 183/349 (52.44%), Query Frame = 0
Query:    1 MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIV-GAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHE----------LVEMWRSMVALARRSA-----TLTETEMKAAIDED-MQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRL--HSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFASP 330
            M +L G AS+  Y   E+  GG  AF ACAAAIF+T QPLQA+V G  DS                                      A+AG  XXXXXX       T                      D G AD + DLRAVMEE LADFYA+AAAQA+  GLAPCY LH IV   +VG G+ +GA RGD  DPR   HE          +   +R +    RR       +L+  E +A I ++ + R M R+ ++TVHVD+Q +CRETFFVR TAT  IVQGSDA+ TR H VRLE+TQRR    +   A LE+  K    WSD++WQVIDIDGWL GN +F  P
Sbjct:  249 MKRLGGGASSW-YTAREIPKGGAVAFRACAAAIFQTGQPLQALVKGKADSRDGGAGGSSTFTPSDGSPSGRSSIRGGVRSGNVA---PAKAGGXXXXXXXSVLSTADT----------------------DTGEADMKLDLRAVMEENLADFYASAAAQASARGLAPCYALHDIVDVTIVGTGMVEGAVRGDAFDPR--IHEDSGMKVFLRNMGNAFRQIYPTRRRRGGPGPVSLSVAEQEAIIQKEVLDRMMSRQRIRTVHVDLQLVCRETFFVRKTATGAIVQGSDAVETRTHQVRLESTQRRPVPSAFDLAALEAASKV---WSDINWQVIDIDGWLDGNDMFVLP 566          
BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A836CHA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA6_9STRA)

HSP 1 Score: 148 bits (373), Expect = 3.300e-37
Identity = 142/329 (43.16%), Postives = 173/329 (52.58%), Query Frame = 0
Query:   21 GGKAAFCACAAAIFRTKQPLQA--IVGAEDSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKSAQAGAQXXXXXXXXXXXXXTGXXXXXXGADGDAEKAPGASA----------ADAG-GADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSA---TLTETEMKAAI--DEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHS---IREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFA 328
            G +AAF AC AAIF+TKQPL A  +    +SG+XXXXXXXXXXXX   XXX             +G +  +AGAQ              G         G A   P A A          ADA  G  A FDL AVME+KLADFY++AAAQA+ SGL   YVLH +  A V  A V +GA RG+  D       L  +W       R SA   +LT  ++K     DE+ +  +RR    T   +V  +CRETFFV+D AT  IVQGSDA   R H +RLET QR L     +     E + K    +SDVDW+V+DIDGWL GNPLF 
Sbjct:  154 GAEAAFRACTAAIFQTKQPLHAPSVDAVNNSGAXXXXXXXXXXXXMPAXXX-------------KGRQGVKAGAQK-------------GKAAPARRGGGSAPARPAAQARAAHQKPKVHADAAEGTRAHFDLCAVMEDKLADFYSSAAAQASASGLVLHYVLHDVRGAVVTDARVIRGALRGEQPDSF-----LRRLWALSKISLRLSAAHPSLTPAQLKPIFRQDEEYKAAIRRSINHTAQAEVHLVCRETFFVQDAATGAIVQGSDAEKMRMHRIRLETGQRLLQMPKVVSPEAAEGLYKN--GFSDVDWKVVDIDGWLDGNPLFG 449          
BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A836CD11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD11_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.130e-26
Identity = 83/201 (41.29%), Postives = 104/201 (51.74%), Query Frame = 0
Query:  133 GADAEFDLRAVMEEKLADFYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPHELVEMWRSMVALARRSA---TLTETEMKAAI--DEDMQRFMRRESVQTVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDVDWQVIDIDGWLGGNPLFA 328
            G  A FDL AVME+KLADFY++AAAQA+ SGL   YVLH +  A V  A V +GA RG+  D       L  +W       R SA   +LT  ++K     DE+ +  +RR    T   +V  +CRETFFV+D AT  IVQ     A                       E + K    +SDVDW+V+DIDGWL GNPLF 
Sbjct:   78 GTRAHFDLCAVMEDKLADFYSSAAAQASASGLVLHYVLHDVRGAVVTDARVIRGALRGEQPDSF-----LRRLWALSKISLRLSAAHPSLTPAQLKPIFRQDEEYKAAIRRSINHTAQAEVHLVCRETFFVQDAATGAIVQVVSPEAA----------------------EGLYKN--GFSDVDWKVVDIDGWLDGNPLFG 249          
BLAST of jgi.p|Trimin1|85873 vs. uniprot
Match: A0A7S3UY89_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY89_HETAK)

HSP 1 Score: 60.5 bits (145), Expect = 3.530e-7
Identity = 33/85 (38.82%), Postives = 44/85 (51.76%), Query Frame = 0
Query:  243 TVHVDVQCICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESVLKRELDWSDV-DWQVIDIDGWLGGNPL 326
            TV VDV   C+E F V+D  T  I+QG++A+ T  H +               TLE+V      W  + DW V+D+DGWL GNP 
Sbjct:  130 TVQVDVDVTCQELFMVKDKPTGVILQGAEALGTVVHRL---------------TLEAVFLPGEGWRMLEDWLVVDVDGWLEGNPF 199          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|85873 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A836C9B7_9STRA1.380e-186100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CA16_9STRA1.120e-5455.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ99_9STRA6.210e-5342.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHA6_9STRA3.300e-3743.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CD11_9STRA3.130e-2641.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UY89_HETAK3.530e-738.82Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:635099..640667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|85873mRNA_2540Tribonema minus UTEX_B_3156 mRNAContig_7 635019..641585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|85873|CE85872_59 ID=Trimin1|85873|CE85872_59|Name=jgi.p|Trimin1|85873|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp
MGKLRGAASTPSYINSELASGGKAAFCACAAAIFRTKQPLQAIVGAEDSG
SSGGSSRRRRSAPPDGEKGSAAGGGAGPAAAVEGGKSAQAGAQSSSGAAP
AESGGGTGAASAAAGADGDAEKAPGASAADAGGADAEFDLRAVMEEKLAD
FYAAAAAQAALSGLAPCYVLHGIVSADVVGAGVQKGAARGDPHDPRGDPH
ELVEMWRSMVALARRSATLTETEMKAAIDEDMQRFMRRESVQTVHVDVQC
ICRETFFVRDTATDTIVQGSDAIATRAHHVRLETTQRRLHSIREATLESV
LKRELDWSDVDWQVIDIDGWLGGNPLFASPPQGEP*
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