Trimin1|350650|estExt_Genemark1.C_Ctg_680056 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350650
Unique NameTrimin1|350650|estExt_Genemark1.C_Ctg_680056
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1207
Homology
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A836CAX9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX9_9STRA)

HSP 1 Score: 1677 bits (4343), Expect = 0.000e+0
Identity = 1206/1206 (100.00%), Postives = 1206/1206 (100.00%), Query Frame = 0
Query:    1 MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 1206
            MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL
Sbjct:    1 MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 1206          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 4.350e-88
Identity = 251/717 (35.01%), Postives = 337/717 (47.00%), Query Frame = 0
Query:  382 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGG-------AEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFR-RASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQ--VWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGG---------GXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASR 1079
            A   LWVDKYAP  F  LLSDE+ NREVLRA+KAWD FVF                                                                             K KG GG       ++G   D+RPE++I++LCGPPG+GKTTLA +VA+ AGYR  EINASDDRTASVL  +                   V  AME   L  D+RPNLI+LDE+DGA+ KAA   ++ +A APL     AAG                            LTRPL+LICN+Q+ P LR +R  A VF FR ++SP RL +RL+ IC +E +T +  +L  L + +  DVR+CL+TLQFVA R          +  G V + S AL+ A+  G+KDERRD+F+  +W                                       G  G+ A D KD D       V  +++ FNDH +VL GVHE +L  +++DP+L ++ AA DWL  AD ++      ++ Y+  RY P AAAGVH   R D R    +      A  A R A+S  L +F  GR   ++GR   A   ++  L     +LAP LR +  +LL   ER R  +LV  L++CG T +    S           G    A E+ LEP ID L  +EG   ++  LA P+R +VAHEV +E +R+  A++
Sbjct:  282 ADGALWVDKYAPDGFRDLLSDEKINREVLRAVKAWDPFVFKKEPARAGAVTAE----------------------------------------------------------------KKKGVGGMKPLSMASKGDATDKRPEARIIMLCGPPGLGKTTLAQVVAKHAGYRVYEINASDDRTASVLRQR-------------------VTEAMEGNTLLADKRPNLIVLDEVDGADGKAAAQVLVDIATAPLAKATAAAGGGKKGKRRTS------------------LTRPLVLICNDQWTPALRPIRAIAQVFVFRAKSSPARLVQRLKAICTSERLTVNTDALTRLADRSHLDVRSCLHTLQFVARR----------ASSGSVTNASAALLTAVAEGIKDERRDLFEGVLW-------------------------------------VLGVRGSMA-DRKDAD-------VFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKAAAAMDWLEMADLMDTRT-NQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTA-RAAKSNILHSFADGRQLGATGRTTQALVLDM--LSHLMDILAPTLRPLNPDLLSPQERARFRELVGILLSCGLTFSPQSASSSSSASAPPAFGAATGAQEFALEPAIDQLLKYEGYEFAHPRLAPPLRPMVAHEVALEGMRKAEAAK 838          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.680e-64
Identity = 263/872 (30.16%), Postives = 367/872 (42.09%), Query Frame = 0
Query:  382 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPK-GAGGAEGGRVDRRPE--SKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLP-PLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTR-------QAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALA--ATAAAREARSAALRAFDAG--------RHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGX----GGDADEWVLEPPIDALTVF------EGQPLSYA-PLAGP---------MRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAP---VHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAP---LRFKYQAGYTNAVRRPVRMKDLL 1206
            A  +LWV +Y+P+ FA LLS+E TNREVLR ++ WDAFVF  A                                                       Q                   P  G       R DRRPE  ++ +LL GPPG+GKTTLAH++A+  GYRPLEINASDDR+A  L +K                   + RAMEN+A+ GD+RPN IILDE+DG E KAA+  I+ M  APL    +G+AG+                          PLTRPLI ICN+ Y P LRALR  A VF FRR +  RL +RL+ IC AE +     +L  LCE++G+DVR+CLNTLQF   R         Q Q+            +S  L+  +  G+KD+ +D+ QV  ++F  P S A                       P    G  GA   + +          V   +  ++DH  VL    E Y Q +++DP+L + + AA+WLA++D ++   + G  H+ +     A AA +H+  R + RP   RLA         +AR +R   L++F  G        R P             V+PL     +L P LR V  +L   AE+  L  LV  L+ACG +   +  SG        G  +   + P +  L  F       G P S   P+  P         ++ L   E ++E +RR    + +A     A                  ++ A+ + A P P   +    E+E+   +    +        K  +R    G+       +G                A    +RFKY AGYTNAVRRPV MKD+L
Sbjct:  345 ASEQLWVSRYSPSAFAHLLSEEATNREVLRLLRQWDAFVFKRAVPKRLAEASGPGRKMWGGQGGGSS-------------------------------QAGHDGAGQEGPGRWTGKSDPDLGDTDLSLQRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREK-------------------MTRAMENQAVLGDKRPNCIILDEVDGIEGKAAMKMIVNMIKAPLKGKQKGSAGSKDEAGGHSGADGSVSCP---------PLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQKEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATA--------------------TPALLPGEEGAG-TEKRAQSRGRDTDRVMASVASYSDHAHVLLAAQENYCQLRFTDPNLTKVLHAAEWLAFSDLVQGRQMEG--HHVMEDLHLATAAALHLLCRVETRP---RLALPRKDHEYRSARLSRQHILQSFGEGCSLQAMWARRPTP------VVLDVVSPLM---HILNPNLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPRSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDA---LKAKKGMSSSTGQGPRLNGLPSKAAASREATPGPNIALLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSHVGDTGTQGLNLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDML 1119          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A1Y1I8B2_KLENI (DNA replication checkpoint protein CHL12/CTF18 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8B2_KLENI)

HSP 1 Score: 231 bits (588), Expect = 1.620e-58
Identity = 257/866 (29.68%), Postives = 369/866 (42.61%), Query Frame = 0
Query:  386 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVF------PAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXX----------------KPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXX--THPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAA-AVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPA--PRLASALAATAAAREARSAALRAFDAGRHPA-SSGRGGGAAATE-VAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASR------------GNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 1206
            LWVDKYAP  F +LLSDE+TNREVLR IK WD  VF      P +                                            F+         Q     XXXXXXXXXXXXX                KP           D RPE K+LLLCG PG+GKTTLAH+ A   GYR +E+NASDDR+A+ L  +                   ++ A++ + + GD+RPN +++DEIDGA    E K AIDA+LA+ +A      GA+G+                             L+RP+I ICN+ YAP LR LR  A VF F   +P RLA RL+ IC  E  +A   +L ALCE T  DVRACLNTLQF+ HR  +A R              +A +++   G KD   ++F++W  +F   KS AG                         TA  G  A       +A       +Q  L  + +H  V++GVHE +L+ +Y + +L+++V   +W+  ++ +   V    +H+ L  Y PA    V   +    RP    P+  +   A  +++      L+++     P  + G    A   + V+PL    ++  P LR V  +LL   E+  +++LV  +I  G T  +    G   G       L+P +  L  FEG+P  +  L   +R+++AHEV ++ +R++ A+R            G+  G+ A                 A        RA   P      + +K+    AA+  V  F         R G          E                P+ +K+  G+TNAVRRPV +KDLL
Sbjct:  260 LWVDKYAPRAFTELLSDEQTNREVLRWIKEWDPCVFHRPSRPPTSFVAHAPVASYRGGFTARGGRNSTGLQPGGRGGDRPDWKHLKEAKFQGRGRGFGEQQNGGRGXXXXXXXXXXXXXXXXXXXXDALQAPVFKKPS----------DGRPEQKVLLLCGAPGLGKTTLAHVAAHHCGYRVVEVNASDDRSANSLKQR-------------------ILDAVQMQPVMGDRRPNCLVIDEIDGALNGAEGKGAIDALLAIVNA------GASGSRDSDKDADEAGGNHLAPSKKKKKKGAVKKLSRPVICICNDMYAPALRQLRQVAKVFVFAPPAPSRLATRLKFICTKEGYSADTRALTALCEHTECDVRACLNTLQFL-HRRGKALR--------------LADISSQVVGRKDMTHNVFEIWTELFQRKKSKAGTG-----------------------TALSGSPAMQGTMTRNAEQQEFHRIQNLLSGYGEHDFVMEGVHENFLRMRYHEGTLQKTVECLEWMGDSELMSRRV-HSRQHFFLMAYQPATLQAVRRLIANPERPHIEFPKTYNKFRADHSSQRQL---LQSWQMEMDPGVARGLNPSAIIRDLVSPLLD--IVAPPTLRPVASQLLSEKEKGEVSELVDTMIGYGFTYKLQTGFGVNPGAGPQ---LDPALGRLAAFEGRPFQHRELTVTLREMLAHEVSLQIIRKEGAARAARAAAVNPSKLGDVSGSPADVTRSRPAKSPAKAEPGASKNGGLNGRAEAPPRKAENGKLEKKVVKAAAKVYVNYFERFKKPALKRNGV---------EEEAVPVQSVTNIRDAMPVLYKFHEGFTNAVRRPVLVKDLL 1034          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: W7TIW5_9STRA (Chromosome transmission fidelity n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIW5_9STRA)

HSP 1 Score: 221 bits (564), Expect = 5.460e-57
Identity = 237/749 (31.64%), Postives = 329/749 (43.93%), Query Frame = 0
Query:  510 RVDRRPE--SKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPL-RGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTR-------QAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRT-AGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALA--ATAAAREARSAALRAFDAG--------RHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGX----GGDADEWVLEPPIDALTVF------EGQPLSYA-PLAGP---------MRQLVAHEVEMERVRRQSASRGNADGAA---AAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQK--------RQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 1206
            R DRRPE  ++ +LL GPPG+GKTTLAH++A+  GYRPLEINASDDR+A  L +K                   + RAM+N+A+ GD+RPN IILDE DG E KAA+  I+ +  APL    +G+AG+                          PLTRPLI ICN+ Y P LRALR  A VF FRR +  RL +RL+ IC AE +     +L  LCE++G+DVR+CLNTLQF   R         Q Q             +S  L+  +  G+KD+ +D+ QV  ++F  P S A                       PG   AG    A   ++D D       V   +  ++DH  VL    E Y Q +++DPSL + + AA+WLA++D +    + G   + +     A AA +H+  R + RP   RLA         +AR +R   L++F  G        R P             V+PL     +L P LR V  +L   AE+  L  LV  L+ACG +   +  SG        G  +   + P +  L  F       G P S   P+  P         ++ L   E ++E +RR    + +A  A    ++              AAA           P    E  E   K        ++     ++         G  GTRG        G+G                + +RFKY AGYTNAVRRPV MKD++
Sbjct:   42 RRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREK-------------------MTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCP---------PLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALL----------------PGEEGAGTEERAQSRVRDTD------RVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGL--HVMEDLHLATAAALHLLCRVETRP---RLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTP------VVLDVVSPLM---HILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSNGLPSKAAASCEATPGPNIAPLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRG-----LDLGEG---LFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A662WL79_9STRA (AAA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WL79_9STRA)

HSP 1 Score: 219 bits (559), Expect = 4.310e-55
Identity = 175/540 (32.41%), Postives = 232/540 (42.96%), Query Frame = 0
Query:  382 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 917
            + A LW+DKY P +F  LLSDERTNREVL  IK WD FVFP                                                                               G GGA+    D+RP  KI+L+CGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K                   ++ AME ++++GD++PN +ILDEIDGA    + K+AI AI  +  APLP  +  AGA                         HPLTRPLI ICN+QYA  LR LR  A +F      PQRL  RL+ IC  E I AS  +L ALC S  NDVR CLNTLQF + + R       A+G G   + S+A + +   G KD    +F+  + VF   +S A                                              A  +Q       +   +++G+ E   +  ++DP++ +     +WL  AD  E       + +  + Y+P AA  VH
Sbjct:  244 SNATLWLDKYRPQSFLDLLSDERTNREVLSWIKKWDRFVFPKKKRANRAHPVVSPVKARGFGGVGKSPWNPSAPQHGSNGL---------------------------------------GGGGADVELEDKRPFDKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLKNK-------------------IISAMEMQSIWGDRKPNCLILDEIDGALNGLDGKSAIAAIQEIVAAPLPSKK--AGAKTTTKNR------------------HPLTRPLICICNDQYAAVLRPLRQLAKIFVLDTPHPQRLITRLKFICRHEGIKASTGALAALCSSGDNDVRYCLNTLQFQSTQAR-------AAGVG---ESSLATLNSKLVGQKDHTHGVFEAMDLVFYESRSKAAKGELPV---------------------------------------AEKIQEAAFSLGNFPLLINGLDENVPKMVFNDPTMNKICDVFEWLGLADAWETRT-RVDQQFVFQGYIPFAAIAVH 655          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A2P4Y368_9STRA (Chromosome transmission fidelity protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y368_9STRA)

HSP 1 Score: 207 bits (526), Expect = 7.280e-54
Identity = 170/543 (31.31%), Postives = 233/543 (42.91%), Query Frame = 0
Query:  382 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGM---KDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 917
            + A LW+DKY P +F  LLSDERTNREVL  IK+WD FVFP                                               +                              K  G       D+RP +KI+L+CGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K                   ++ AME ++++G+++PN IILDEIDGA    + K+AI+ I  +  APL   R   GA                         HPLTRPLI ICN+ YA  LR LR  A +F      PQRL  RL+ IC  E I A+   L ALC S  ND+R CLNTLQF   ++R A +             S + V  L+TG+   KD    +F+  + VF   +S                             + +G          +AP  A  +   +    + + ++ G+ E   +  ++DP++++     +WL  AD  E       + YA + Y+P AA   H
Sbjct:   35 SNAVLWLDKYRPQSFLDLLSDERTNREVLTWIKSWDHFVFPK----------------------------------------------KKRANGTLPVSPDKANTLGGSSKSPWNQGISKNQGNENEDDEDKRPLNKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNK-------------------LISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVSAPLQ--RKKTGAKTAAKNR------------------HPLTRPLICICNDLYASVLRPLRQMAKIFMLDAPHPQRLVTRLKYICRHEGIKATTGVLAALCSSADNDIRYCLNTLQFQTTQSRGAAK-------------SKSAVVTLSTGLVAQKDHIHGMFEALDLVFYNARS----------------------------KSAKG----------EAPV-AEKINEAVASLGNFQLLISGLDENVPKMIFNDPTMKKIWDVFEWLGLADEYENRA-RAEQQYAFQAYIPFAAVATH 439          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6A3ERC9_9STRA (AAA domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ERC9_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.230e-53
Identity = 159/416 (38.22%), Postives = 203/416 (48.80%), Query Frame = 0
Query:  386 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGR-VDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGM---KDERRDIFQVWNAVFTAPKS 793
            LW+DKY P NF  LLSDERTNREVL  IK+WD FVFP                                                         +             XXX  K +G G AE     D+RP +KI+LLCGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K                   ++ +ME ++++G+++PN IILDEIDGA    + K+AI+ IL +A+APL   R  AGA                         HPL RPLI ICN+ YA  LR LR  A +F+      QRL  RL+ IC  E I AS  +L ALC S  ND+R CLNTLQF + ++R+A +   A             +  LTTG+   KD    +F+V + VF   +S
Sbjct:  229 LWLDKYKPKNFLDLLSDERTNREVLTWIKSWDRFVFPKKLRANGTLPISPA-------------------------------------------KPNGFGNKTPWASKXXXESKNQGNGHAESEEDEDKRPFNKIILLCGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNK-------------------IISSMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVILEIANAPLQ--RKKAGAKTAAKNR------------------HPLIRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKHICRHEGIKASTGALAALCSSADNDIRYCLNTLQFQSTQSRRAAKDKSA-------------IVTLTTGLVAQKDHVHGMFEVMDLVFFEARS 549          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6G0XG15_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XG15_9STRA)

HSP 1 Score: 210 bits (534), Expect = 5.880e-53
Identity = 169/536 (31.53%), Postives = 221/536 (41.23%), Query Frame = 0
Query:  386 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 917
            LW+DKY P +F  LLSDERTNREVL  +K+WDA VFP                                                                             PK     +    D RPE KI+L+CGPPG GKTTLA I A+ AGY P+EINASDDRTA VL +K                   ++ AME +++FGDQRPN IILDEIDGA    E K AI A+ A+  AP  P R   G                          HPL RP+I ICN+Q+AP LR LR  A +F      P++L +RL+ IC  E + AS   L  LC    NDVR CLN LQF + +T                 ++++++  +  G KD  +  + VW  VF   K                                          D D+ S    V    ++F     +L G+HE  L   ++DP+L +   A +W+ +AD  E  V    + +AL  Y   AA  V+
Sbjct:  167 LWLDKYRPRHFVDLLSDERTNREVLLWLKSWDATVFPQKVKTNT----------------------------------------------------------------------PKSKLPEQNKAGDMRPEQKIILICGPPGAGKTTLAGIAARHAGYNPIEINASDDRTAGVLKEK-------------------IISAMEMQSIFGDQRPNCIILDEIDGALSGQEGKGAISALQALVTAPYAP-RSKKGKKAANAGG------------------HPLIRPIICICNDQFAPVLRPLRKLAKIFIMHTPEPRQLMQRLKYICKQEKVQASNSLLSTLCLRADNDVRFCLNALQFASAKTST---------------LTLSMIDNMM-GRKDVSKGAYDVWETVFYESKE-------------------------------------QQKNDSDSFS---RVFEATDRFGSQDLILSGLHENLLPLAFNDPTLSKIHNALEWMGFADLCETRV-RAHQQFALTPYTSVAAVSVY 537          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A7S3YLZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLZ4_HETAK)

HSP 1 Score: 208 bits (529), Expect = 7.270e-53
Identity = 191/580 (32.93%), Postives = 271/580 (46.72%), Query Frame = 0
Query:  509 GRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENR--ALFGDQRPNLIILDEIDG-AEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAAL---RAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRS-----GGGXGGDADE--WVLEPPIDALTVFEG-QPLSYAPLAGPMRQLVAHEVEMERVRR 1074
            G  D RP++K++LL G PG GKTTLAH+VA+ AGY+PLE+NASD R+A  L +                    + RA+ +R  A  G  RP  ++LDE+DG AE  AA+  +L +A APL    G+ G                           PLTRPLILICN+ YAP LR LR  A VFSF+  S  RL +RLRVI   E +  S  SL  LC++T ND+R+CLNTLQFV    +  +     S G        AL  A+  G+KD +R IF+VWN+++ +                            P  T   G A A   ++         +   +E+  +  +VL G HE     +++DP+L ++ AA +WLA AD  +         +       AAA  +H+ +R DA   APRL    A     +E R       +  DA R  A     G AA   + PL     +L P ++ V L+L++ A++++ + LV  L +C  T  +   S      G  G    +  ++LEP +  L  F G      A LA  + Q+ A     ER+RR
Sbjct:   20 GPRDLRPQTKVILLAGAPGTGKTTLAHVVARHAGYQPLEVNASDHRSARELRE-------------------LLGRALGSRREAFGGGARPTALVLDEVDGIAEGPAAMKVLLDIAQAPLRAGSGSGGKGKKGGLP-------------------PLTRPLILICNDLYAPQLRKLRQIAKVFSFKETSEDRLMKRLRVILKQEKMDFSHESLRTLCQTTSNDIRSCLNTLQFVGLEIKNNKLKGMTSSG--------ALFRAIENGIKDGKRSIFEVWNSMYISSGKNRS--------RPAALQKKMKLFSDPSSTTAGGSAKAKPAEE---------IMDLVERGGEAAKVLAGAHEHLPLLRHNDPTLVKAAAAINWLAAADLAQ---------FRFPALGWAAAGALHLLLRADA---APRLELPRADYLHGQELRQKRFLLQQHADACRTLAVGRTLGVAALDALGPLMD---MLTPSIQAVNLDLMKPADKEKFSHLVKVLASCNLTYKLDSESYNKFREGEEGAHPSQARYLLEPDLGDLLRFGGAMARPRATLAATVAQMAAQAANYERLRR 521          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAX9_9STRA0.000e+0100.00AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5K262_9PHAE4.350e-8835.01AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CU49_9STRA3.680e-6430.16AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A1Y1I8B2_KLENI1.620e-5829.68DNA replication checkpoint protein CHL12/CTF18 n=1... [more]
W7TIW5_9STRA5.460e-5731.64Chromosome transmission fidelity n=2 Tax=Nannochlo... [more]
A0A662WL79_9STRA4.310e-5532.41AAA domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A2P4Y368_9STRA7.280e-5431.31Chromosome transmission fidelity protein (Fragment... [more]
A0A6A3ERC9_9STRA3.230e-5338.22AAA domain-containing protein n=6 Tax=Phytophthora... [more]
A0A6G0XG15_9STRA5.880e-5331.53AAA domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S3YLZ4_HETAK7.270e-5332.93Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 516..700
e-value: 3.2E-12
score: 56.6
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 520..608
e-value: 7.9E-10
score: 39.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 384..562
e-value: 1.9E-26
score: 95.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 563..692
e-value: 2.9E-12
score: 48.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 385..745
NoneNo IPR availableGENE3D1.10.8.60coord: 694..750
e-value: 7.5E-9
score: 37.0
NoneNo IPR availablePIRSRPIRSR001174-2PIRSR001174-2coord: 516..541
e-value: 0.0026
score: 14.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1067..1137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..487
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 564..1202
coord: 57..562
NoneNo IPR availablePANTHERPTHR23389:SF3CHROMOSOME TRANSMISSION FIDELITY PROTEIN 18 HOMOLOGcoord: 564..1202
coord: 57..562
NoneNo IPR availableCDDcd00009AAAcoord: 510..606
e-value: 3.46958E-11
score: 60.6227
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 694..740
e-value: 3.36513E-10
score: 54.8425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:378439..387486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350650mRNA_8496Tribonema minus UTEX_B_3156 mRNAContig_68 378267..387486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350650|estExt_Genemark1.C_Ctg_680056 ID=Trimin1|350650|estExt_Genemark1.C_Ctg_680056|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1207bp
MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEDEPPPPPPESPDGGKRQ
QTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRR
RPLAPSAAGVNGTGTSTSSSSSSGSSGAALKSAFATTKLDMDAPAALGGW
RAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELV
TQAPLFRAARDRSAVLARPPLATGGGGDGVGGDGGGGDGGSGASAAAGDD
FVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETL
MARAERRQVERLHRKTMVAADAAAKAPAAAAAASAAAAAGEDGASDLQDG
AETAGAASGGSAASPNRRDAAAAAAAAAAAAAQARLWVDKYAPTNFAQLL
SDERTNREVLRAIKAWDAFVFPAAAAASAAAAAAREGATSAAASANARGK
GGASGGGGGSGGGGGGGAFRGKGGRGSGDQGGGAAGGRGGGAAAAAAAKP
KGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINA
SDDRTASVLTDKAPLEINASDDRTASVLTDKVVRAMENRALFGDQRPNLI
ILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAAAACGKKKGSRGGGGA
RGGGGGGGTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLAR
RLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPL
QASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGGMR
AAALAAAAHTAAAAAADAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLE
QFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGS
EHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALR
AFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQ
RLADLVSALIACGATGTVAGRSGGGGGGDADEWVLEPPIDALTVFEGQPL
SYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAPEDKDDSSQQRA
APAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGAR
GTRGGAQGGVQGGKGEGGGGGGAQAAGAAAAAPLRFKYQAGYTNAVRRPV
RMKDLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase