mRNA_8496 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A836CAX9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX9_9STRA) HSP 1 Score: 1677 bits (4343), Expect = 0.000e+0 Identity = 1206/1206 (100.00%), Postives = 1206/1206 (100.00%), Query Frame = 1
Query: 1 MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 3618
MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL
Sbjct: 1 MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 1206
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE) HSP 1 Score: 319 bits (817), Expect = 8.190e-88 Identity = 251/717 (35.01%), Postives = 337/717 (47.00%), Query Frame = 1
Query: 1144 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGG-------AEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFR-RASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQ--VWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGG---------GXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASR 3237
A LWVDKYAP F LLSDE+ NREVLRA+KAWD FVF K KG GG ++G D+RPE++I++LCGPPG+GKTTLA +VA+ AGYR EINASDDRTASVL + V AME L D+RPNLI+LDE+DGA+ KAA ++ +A APL AAG LTRPL+LICN+Q+ P LR +R A VF FR ++SP RL +RL+ IC +E +T + +L L + + DVR+CL+TLQFVA R + G V + S AL+ A+ G+KDERRD+F+ +W G G+ A D KD D V +++ FNDH +VL GVHE +L +++DP+L ++ AA DWL AD ++ ++ Y+ RY P AAAGVH R D R + A A R A+S L +F GR ++GR A ++ L +LAP LR + +LL ER R +LV L++CG T + S G A E+ LEP ID L +EG ++ LA P+R +VAHEV +E +R+ A++
Sbjct: 282 ADGALWVDKYAPDGFRDLLSDEKINREVLRAVKAWDPFVFKKEPARAGAVTAE----------------------------------------------------------------KKKGVGGMKPLSMASKGDATDKRPEARIIMLCGPPGLGKTTLAQVVAKHAGYRVYEINASDDRTASVLRQR-------------------VTEAMEGNTLLADKRPNLIVLDEVDGADGKAAAQVLVDIATAPLAKATAAAGGGKKGKRRTS------------------LTRPLVLICNDQWTPALRPIRAIAQVFVFRAKSSPARLVQRLKAICTSERLTVNTDALTRLADRSHLDVRSCLHTLQFVARR----------ASSGSVTNASAALLTAVAEGIKDERRDLFEGVLW-------------------------------------VLGVRGSMA-DRKDAD-------VFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKAAAAMDWLEMADLMDTRT-NQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTA-RAAKSNILHSFADGRQLGATGRTTQALVLDM--LSHLMDILAPTLRPLNPDLLSPQERARFRELVGILLSCGLTFSPQSASSSSSASAPPAFGAATGAQEFALEPAIDQLLKYEGYEFAHPRLAPPLRPMVAHEVALEGMRKAEAAK 838
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA) HSP 1 Score: 249 bits (635), Expect = 4.840e-64 Identity = 263/872 (30.16%), Postives = 367/872 (42.09%), Query Frame = 1
Query: 1144 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPK-GAGGAEGGRVDRRPE--SKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLP-PLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTR-------QAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALA--ATAAAREARSAALRAFDAG--------RHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGX----GGDADEWVLEPPIDALTVF------EGQPLSYA-PLAGP---------MRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAP---VHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAP---LRFKYQAGYTNAVRRPVRMKDLL 3618
A +LWV +Y+P+ FA LLS+E TNREVLR ++ WDAFVF A Q P G R DRRPE ++ +LL GPPG+GKTTLAH++A+ GYRPLEINASDDR+A L +K + RAMEN+A+ GD+RPN IILDE+DG E KAA+ I+ M APL +G+AG+ PLTRPLI ICN+ Y P LRALR A VF FRR + RL +RL+ IC AE + +L LCE++G+DVR+CLNTLQF R Q Q+ +S L+ + G+KD+ +D+ QV ++F P S A P G GA + + V + ++DH VL E Y Q +++DP+L + + AA+WLA++D ++ + G H+ + A AA +H+ R + RP RLA +AR +R L++F G R P V+PL +L P LR V +L AE+ L LV L+ACG + + SG G + + P + L F G P S P+ P ++ L E ++E +RR + +A A ++ A+ + A P P + E+E+ + + K +R G+ +G A +RFKY AGYTNAVRRPV MKD+L
Sbjct: 345 ASEQLWVSRYSPSAFAHLLSEEATNREVLRLLRQWDAFVFKRAVPKRLAEASGPGRKMWGGQGGGSS-------------------------------QAGHDGAGQEGPGRWTGKSDPDLGDTDLSLQRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREK-------------------MTRAMENQAVLGDKRPNCIILDEVDGIEGKAAMKMIVNMIKAPLKGKQKGSAGSKDEAGGHSGADGSVSCP---------PLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQKEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATA--------------------TPALLPGEEGAG-TEKRAQSRGRDTDRVMASVASYSDHAHVLLAAQENYCQLRFTDPNLTKVLHAAEWLAFSDLVQGRQMEG--HHVMEDLHLATAAALHLLCRVETRP---RLALPRKDHEYRSARLSRQHILQSFGEGCSLQAMWARRPTP------VVLDVVSPLM---HILNPNLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPRSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDA---LKAKKGMSSSTGQGPRLNGLPSKAAASREATPGPNIALLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSHVGDTGTQGLNLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDML 1119
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A1Y1I8B2_KLENI (DNA replication checkpoint protein CHL12/CTF18 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8B2_KLENI) HSP 1 Score: 231 bits (588), Expect = 1.970e-58 Identity = 257/866 (29.68%), Postives = 369/866 (42.61%), Query Frame = 1
Query: 1156 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVF------PAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXX----------------KPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXX--THPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAA-AVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPA--PRLASALAATAAAREARSAALRAFDAGRHPA-SSGRGGGAAATE-VAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASR------------GNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 3618
LWVDKYAP F +LLSDE+TNREVLR IK WD VF P + F+ Q XXXXXXXXXXXXX KP D RPE K+LLLCG PG+GKTTLAH+ A GYR +E+NASDDR+A+ L + ++ A++ + + GD+RPN +++DEIDGA E K AIDA+LA+ +A GA+G+ L+RP+I ICN+ YAP LR LR A VF F +P RLA RL+ IC E +A +L ALCE T DVRACLNTLQF+ HR +A R +A +++ G KD ++F++W +F KS AG TA G A +A +Q L + +H V++GVHE +L+ +Y + +L+++V +W+ ++ + V +H+ L Y PA V + RP P+ + A +++ L+++ P + G A + V+PL ++ P LR V +LL E+ +++LV +I G T + G G L+P + L FEG+P + L +R+++AHEV ++ +R++ A+R G+ G+ A A RA P + +K+ AA+ V F R G E P+ +K+ G+TNAVRRPV +KDLL
Sbjct: 260 LWVDKYAPRAFTELLSDEQTNREVLRWIKEWDPCVFHRPSRPPTSFVAHAPVASYRGGFTARGGRNSTGLQPGGRGGDRPDWKHLKEAKFQGRGRGFGEQQNGGRGXXXXXXXXXXXXXXXXXXXXDALQAPVFKKPS----------DGRPEQKVLLLCGAPGLGKTTLAHVAAHHCGYRVVEVNASDDRSANSLKQR-------------------ILDAVQMQPVMGDRRPNCLVIDEIDGALNGAEGKGAIDALLAIVNA------GASGSRDSDKDADEAGGNHLAPSKKKKKKGAVKKLSRPVICICNDMYAPALRQLRQVAKVFVFAPPAPSRLATRLKFICTKEGYSADTRALTALCEHTECDVRACLNTLQFL-HRRGKALR--------------LADISSQVVGRKDMTHNVFEIWTELFQRKKSKAGTG-----------------------TALSGSPAMQGTMTRNAEQQEFHRIQNLLSGYGEHDFVMEGVHENFLRMRYHEGTLQKTVECLEWMGDSELMSRRV-HSRQHFFLMAYQPATLQAVRRLIANPERPHIEFPKTYNKFRADHSSQRQL---LQSWQMEMDPGVARGLNPSAIIRDLVSPLLD--IVAPPTLRPVASQLLSEKEKGEVSELVDTMIGYGFTYKLQTGFGVNPGAGPQ---LDPALGRLAAFEGRPFQHRELTVTLREMLAHEVSLQIIRKEGAARAARAAAVNPSKLGDVSGSPADVTRSRPAKSPAKAEPGASKNGGLNGRAEAPPRKAENGKLEKKVVKAAAKVYVNYFERFKKPALKRNGV---------EEEAVPVQSVTNIRDAMPVLYKFHEGFTNAVRRPVLVKDLL 1034
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: W7TIW5_9STRA (Chromosome transmission fidelity n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIW5_9STRA) HSP 1 Score: 221 bits (564), Expect = 6.270e-57 Identity = 237/749 (31.64%), Postives = 329/749 (43.93%), Query Frame = 1
Query: 1528 RVDRRPE--SKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPL-RGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTR-------QAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRT-AGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALA--ATAAAREARSAALRAFDAG--------RHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGX----GGDADEWVLEPPIDALTVF------EGQPLSYA-PLAGP---------MRQLVAHEVEMERVRRQSASRGNADGAA---AAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQK--------RQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 3618
R DRRPE ++ +LL GPPG+GKTTLAH++A+ GYRPLEINASDDR+A L +K + RAM+N+A+ GD+RPN IILDE DG E KAA+ I+ + APL +G+AG+ PLTRPLI ICN+ Y P LRALR A VF FRR + RL +RL+ IC AE + +L LCE++G+DVR+CLNTLQF R Q Q +S L+ + G+KD+ +D+ QV ++F P S A PG AG A ++D D V + ++DH VL E Y Q +++DPSL + + AA+WLA++D + + G + + A AA +H+ R + RP RLA +AR +R L++F G R P V+PL +L P LR V +L AE+ L LV L+ACG + + SG G + + P + L F G P S P+ P ++ L E ++E +RR + +A A ++ AAA P E E K ++ ++ G GTRG G+G + +RFKY AGYTNAVRRPV MKD++
Sbjct: 42 RRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREK-------------------MTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCP---------PLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALL----------------PGEEGAGTEERAQSRVRDTD------RVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGL--HVMEDLHLATAAALHLLCRVETRP---RLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTP------VVLDVVSPLM---HILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSNGLPSKAAASCEATPGPNIAPLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRG-----LDLGEG---LFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A662WL79_9STRA (AAA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WL79_9STRA) HSP 1 Score: 219 bits (559), Expect = 5.050e-55 Identity = 175/540 (32.41%), Postives = 232/540 (42.96%), Query Frame = 1
Query: 1144 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 2751
+ A LW+DKY P +F LLSDERTNREVL IK WD FVFP G GGA+ D+RP KI+L+CGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K ++ AME ++++GD++PN +ILDEIDGA + K+AI AI + APLP + AGA HPLTRPLI ICN+QYA LR LR A +F PQRL RL+ IC E I AS +L ALC S NDVR CLNTLQF + + R A+G G + S+A + + G KD +F+ + VF +S A A +Q + +++G+ E + ++DP++ + +WL AD E + + + Y+P AA VH
Sbjct: 244 SNATLWLDKYRPQSFLDLLSDERTNREVLSWIKKWDRFVFPKKKRANRAHPVVSPVKARGFGGVGKSPWNPSAPQHGSNGL---------------------------------------GGGGADVELEDKRPFDKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLKNK-------------------IISAMEMQSIWGDRKPNCLILDEIDGALNGLDGKSAIAAIQEIVAAPLPSKK--AGAKTTTKNR------------------HPLTRPLICICNDQYAAVLRPLRQLAKIFVLDTPHPQRLITRLKFICRHEGIKASTGALAALCSSGDNDVRYCLNTLQFQSTQAR-------AAGVG---ESSLATLNSKLVGQKDHTHGVFEAMDLVFYESRSKAAKGELPV---------------------------------------AEKIQEAAFSLGNFPLLINGLDENVPKMVFNDPTMNKICDVFEWLGLADAWETRT-RVDQQFVFQGYIPFAAIAVH 655
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A2P4Y368_9STRA (Chromosome transmission fidelity protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y368_9STRA) HSP 1 Score: 207 bits (526), Expect = 7.970e-54 Identity = 170/543 (31.31%), Postives = 233/543 (42.91%), Query Frame = 1
Query: 1144 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGM---KDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 2751
+ A LW+DKY P +F LLSDERTNREVL IK+WD FVFP + K G D+RP +KI+L+CGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K ++ AME ++++G+++PN IILDEIDGA + K+AI+ I + APL R GA HPLTRPLI ICN+ YA LR LR A +F PQRL RL+ IC E I A+ L ALC S ND+R CLNTLQF ++R A + S + V L+TG+ KD +F+ + VF +S + +G +AP A + + + + ++ G+ E + ++DP++++ +WL AD E + YA + Y+P AA H
Sbjct: 35 SNAVLWLDKYRPQSFLDLLSDERTNREVLTWIKSWDHFVFPK----------------------------------------------KKRANGTLPVSPDKANTLGGSSKSPWNQGISKNQGNENEDDEDKRPLNKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNK-------------------LISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVSAPLQ--RKKTGAKTAAKNR------------------HPLTRPLICICNDLYASVLRPLRQMAKIFMLDAPHPQRLVTRLKYICRHEGIKATTGVLAALCSSADNDIRYCLNTLQFQTTQSRGAAK-------------SKSAVVTLSTGLVAQKDHIHGMFEALDLVFYNARS----------------------------KSAKG----------EAPV-AEKINEAVASLGNFQLLISGLDENVPKMIFNDPTMKKIWDVFEWLGLADEYENRA-RAEQQYAFQAYIPFAAVATH 439
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6A3ERC9_9STRA (AAA domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ERC9_9STRA) HSP 1 Score: 213 bits (542), Expect = 3.710e-53 Identity = 159/416 (38.22%), Postives = 203/416 (48.80%), Query Frame = 1
Query: 1156 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGR-VDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGM---KDERRDIFQVWNAVFTAPKS 2379
LW+DKY P NF LLSDERTNREVL IK+WD FVFP + XXX K +G G AE D+RP +KI+LLCGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K ++ +ME ++++G+++PN IILDEIDGA + K+AI+ IL +A+APL R AGA HPL RPLI ICN+ YA LR LR A +F+ QRL RL+ IC E I AS +L ALC S ND+R CLNTLQF + ++R+A + A + LTTG+ KD +F+V + VF +S
Sbjct: 229 LWLDKYKPKNFLDLLSDERTNREVLTWIKSWDRFVFPKKLRANGTLPISPA-------------------------------------------KPNGFGNKTPWASKXXXESKNQGNGHAESEEDEDKRPFNKIILLCGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNK-------------------IISSMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVILEIANAPLQ--RKKAGAKTAAKNR------------------HPLIRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKHICRHEGIKASTGALAALCSSADNDIRYCLNTLQFQSTQSRRAAKDKSA-------------IVTLTTGLVAQKDHVHGMFEVMDLVFFEARS 549
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6G0XG15_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XG15_9STRA) HSP 1 Score: 210 bits (534), Expect = 6.590e-53 Identity = 169/536 (31.53%), Postives = 221/536 (41.23%), Query Frame = 1
Query: 1156 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 2751
LW+DKY P +F LLSDERTNREVL +K+WDA VFP PK + D RPE KI+L+CGPPG GKTTLA I A+ AGY P+EINASDDRTA VL +K ++ AME +++FGDQRPN IILDEIDGA E K AI A+ A+ AP P R G HPL RP+I ICN+Q+AP LR LR A +F P++L +RL+ IC E + AS L LC NDVR CLN LQF + +T ++++++ + G KD + + VW VF K D D+ S V ++F +L G+HE L ++DP+L + A +W+ +AD E V + +AL Y AA V+
Sbjct: 167 LWLDKYRPRHFVDLLSDERTNREVLLWLKSWDATVFPQKVKTNT----------------------------------------------------------------------PKSKLPEQNKAGDMRPEQKIILICGPPGAGKTTLAGIAARHAGYNPIEINASDDRTAGVLKEK-------------------IISAMEMQSIFGDQRPNCIILDEIDGALSGQEGKGAISALQALVTAPYAP-RSKKGKKAANAGG------------------HPLIRPIICICNDQFAPVLRPLRKLAKIFIMHTPEPRQLMQRLKYICKQEKVQASNSLLSTLCLRADNDVRFCLNALQFASAKTST---------------LTLSMIDNMM-GRKDVSKGAYDVWETVFYESKE-------------------------------------QQKNDSDSFS---RVFEATDRFGSQDLILSGLHENLLPLAFNDPTLSKIHNALEWMGFADLCETRV-RAHQQFALTPYTSVAAVSVY 537
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A7S3YLZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLZ4_HETAK) HSP 1 Score: 208 bits (529), Expect = 8.070e-53 Identity = 191/580 (32.93%), Postives = 271/580 (46.72%), Query Frame = 1
Query: 1525 GRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENR--ALFGDQRPNLIILDEIDG-AEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAAL---RAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRS-----GGGXGGDADE--WVLEPPIDALTVFEG-QPLSYAPLAGPMRQLVAHEVEMERVRR 3222
G D RP++K++LL G PG GKTTLAH+VA+ AGY+PLE+NASD R+A L + + RA+ +R A G RP ++LDE+DG AE AA+ +L +A APL G+ G PLTRPLILICN+ YAP LR LR A VFSF+ S RL +RLRVI E + S SL LC++T ND+R+CLNTLQFV + + S G AL A+ G+KD +R IF+VWN+++ + P T G A A ++ + +E+ + +VL G HE +++DP+L ++ AA +WLA AD + + AAA +H+ +R DA APRL A +E R + DA R A G AA + PL +L P ++ V L+L++ A++++ + LV L +C T + S G G + ++LEP + L F G A LA + Q+ A ER+RR
Sbjct: 20 GPRDLRPQTKVILLAGAPGTGKTTLAHVVARHAGYQPLEVNASDHRSARELRE-------------------LLGRALGSRREAFGGGARPTALVLDEVDGIAEGPAAMKVLLDIAQAPLRAGSGSGGKGKKGGLP-------------------PLTRPLILICNDLYAPQLRKLRQIAKVFSFKETSEDRLMKRLRVILKQEKMDFSHESLRTLCQTTSNDIRSCLNTLQFVGLEIKNNKLKGMTSSG--------ALFRAIENGIKDGKRSIFEVWNSMYISSGKNRS--------RPAALQKKMKLFSDPSSTTAGGSAKAKPAEE---------IMDLVERGGEAAKVLAGAHEHLPLLRHNDPTLVKAAAAINWLAAADLAQ---------FRFPALGWAAAGALHLLLRADA---APRLELPRADYLHGQELRQKRFLLQQHADACRTLAVGRTLGVAALDALGPLMD---MLTPSIQAVNLDLMKPADKEKFSHLVKVLASCNLTYKLDSESYNKFREGEEGAHPSQARYLLEPDLGDLLRFGGAMARPRATLAATVAQMAAQAANYERLRR 521 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8496 ID=mRNA_8496|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3793bp|location=Sequence derived from alignment at Contig_68:378267..387486- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAACGACTTTGAGGAGCCGTACGACTTTCCGGAGGAGGAGCAGGAGGAback to top protein sequence of jgi.p|Trimin1|350650 >Trimin1|350650|estExt_Genemark1.C_Ctg_680056 ID=Trimin1|350650|estExt_Genemark1.C_Ctg_680056|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1207bp MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEDEPPPPPPESPDGGKRQback to top mRNA from alignment at Contig_68:378267..387486- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8496 ID=mRNA_8496|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9220bp|location=Sequence derived from alignment at Contig_68:378267..387486- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_68:378267..387486- >mRNA_8496 ID=mRNA_8496|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3621bp|location=Sequence derived from alignment at Contig_68:378267..387486- (Tribonema minus UTEX_B_3156 )back to top |