mRNA_10120 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350486
Unique NamemRNA_10120
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836C9E5_9STRA (CHRD domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9E5_9STRA)

HSP 1 Score: 213 bits (541), Expect = 5.860e-70
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
Query:    1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
            TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL
Sbjct:    1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YML2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML2_9STRA)

HSP 1 Score: 175 bits (444), Expect = 7.130e-49
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 1
Query:    1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHT 276
            TDGPGDATGQGTAKIVLQGQKLCFVLTTNL+GIVAGHIHKGA G+DGDVFIDLLG LADL KNPLKAC+QLS AEAQALL DPAGYY+NVHT
Sbjct:  481 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLQGIVAGHIHKGAAGIDGDVFIDLLGGLADLTKNPLKACVQLSAAEAQALLADPAGYYINVHT 572          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836C9W3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.480e-37
Identity = 64/99 (64.65%), Postives = 78/99 (78.79%), Query Frame = 1
Query:   16 DATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
            D  GQGTAK  + G+ LCF + TNL+GIVAGHIH+GA GVDGDV++DL G +ADL  NPL+AC+ L+ A+A+AL+  P  YYVNVHTDQ P GAIRSQL
Sbjct:  268 DPEGQGTAKFAIAGRTLCFTMKTNLKGIVAGHIHQGAAGVDGDVYVDLFGGIADLTANPLQACITLTYAQAKALVKTPTDYYVNVHTDQFPDGAIRSQL 366          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YYA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA4_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.890e-27
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1
Query:   31 GTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHT 276
            G  +  + G+ LCF + TNL+GIVA HIH+GA GVDGDV++DL G +ADL  NPL+AC+ L+ A+A+AL+  P  YYVNVHT
Sbjct:  135 GHRQFAIAGRTLCFTMKTNLQGIVAEHIHEGAAGVDGDVYVDLFGGIADLTANPLQACITLTHAQAKALVKTPTDYYVNVHT 216          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YI34_9STRA (CHRD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI34_9STRA)

HSP 1 Score: 100 bits (249), Expect = 9.610e-25
Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 1
Query:    4 DGPGDATGQGTAKIVL-QGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQ-ALLTDPAGYYVNVHTDQHPGGAIRSQL 312
            D  GD  G GTA       + +CF + T L+G+ AGHIHKG VG +GDV +DLL  LAD   NPL+ C+ L       A+L +PAG+YVN+H    P GAIR Q+
Sbjct:   59 DPTGDPNGGGTATFFTPDDETICFSIDTTLDGVTAGHIHKGVVGTNGDVVVDLLSVLADTKVNPLEGCVDLGGQRPLLAILENPAGFYVNIHNIDFPKGAIRGQM 163          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A397NQ64_9SPHN (CHRD domain-containing protein n=1 Tax=Hephaestia caeni TaxID=645617 RepID=A0A397NQ64_9SPHN)

HSP 1 Score: 83.2 bits (204), Expect = 3.350e-18
Identity = 47/105 (44.76%), Postives = 56/105 (53.33%), Query Frame = 1
Query:    7 GPGDATGQGTAKIVLQGQKLCFVLTTNLEGI---VAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
            GPGD  G GT K+           T ++ GI    A HIHKGA+GV G   + L    A       K CL +  A A A++ DPAGYYVNVHT  +P GAIR QL
Sbjct:   39 GPGDPDGTGTVKVTADSATNTVCYTLDVRGISAPTAAHIHKGALGVAGPPVLPL----APPTSGRSKECLSVDKALAAAIIADPAGYYVNVHTADYPKGAIRGQL 139          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A535UIK2_9CHLR (CHRD domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535UIK2_9CHLR)

HSP 1 Score: 77.4 bits (189), Expect = 5.920e-16
Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 1
Query:   10 PGDATGQGTAKIVLQGQKLCFVLTTNLEG--IVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
            PG + G GTAKI + G  LC+ LT N      +AGHIH+G  G  G + + L    A         C  ++   A  +  +P  YYVN+HT  HP GAIR QL
Sbjct:   43 PGPSGGAGTAKITIDGTNLCYDLTWNAATGTPIAGHIHQGPKGASGPIVVTLSPTTAH-------TCTTVAPTIASGIAGNPGNYYVNLHTQDHPDGAIRGQL 138          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: UPI001EF6F767 (CHRD domain-containing protein n=3 Tax=Frankia TaxID=1854 RepID=UPI001EF6F767)

HSP 1 Score: 80.5 bits (197), Expect = 8.130e-16
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 1
Query:   13 GDATGQGTAKIVLQGQKLCFVLTTNLEGIVA---GHIHKGAVGVDGDVFIDLLG-ALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
            GD  G  TA I LQG ++ F  +   +GI A   GHIH+GA GV+GDV + L G A+ + +     A      A A AL  DPAG+Y+N+HT + PGGA+R QL
Sbjct:   81 GDPDGSATAIIRLQGDRVTFAFSW--KGIGAPTLGHIHQGAAGVNGDVKVALWGTAVPETVTADAGAVTVSDPAIADALRADPAGFYLNLHTQEFPGGAVRGQL 182          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: UPI001B83835D (CHRD domain-containing protein n=1 Tax=Sphingomonadaceae bacterium LXI357 TaxID=2826939 RepID=UPI001B83835D)

HSP 1 Score: 76.3 bits (186), Expect = 2.020e-15
Identity = 43/105 (40.95%), Postives = 56/105 (53.33%), Query Frame = 1
Query:    7 GPGDATGQGTAKIVLQGQK--LCFVLTT-NLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
            GPGD  G GTAK+        +C+ LT  ++    A HIH+GA GV G   + L       +    K CL +    A A++ +P GYYVNVHT  +P GAIR QL
Sbjct:   46 GPGDPDGSGTAKVTADATTGTICYELTVQDISQPTAAHIHQGARGVAGPPVLQLKPP----VTGSSKECLDVDKQLAAAIIANPTGYYVNVHTADYPKGAIRGQL 146          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A5C6ULP5_9SPHN (CHRD domain-containing protein n=2 Tax=Sphingorhabdus soli TaxID=2601267 RepID=A0A5C6ULP5_9SPHN)

HSP 1 Score: 79.3 bits (194), Expect = 2.700e-15
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 1
Query:    7 GPGDATGQGTAKIVLQG--QKLCFVLTTNLEGI-VAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
            GPGD  G GTAKI        +C+ +T    G   A H+H+GA GV G   +      A         CL +  A A +++ DP+ YYVNVHT  +PGGAIR QL
Sbjct:  249 GPGDPDGTGTAKITADATTNTVCYDITVQRIGTPTAAHLHRGAAGVSGPPVVTFKAPTAGATSE----CLSVDKALAASIIADPSNYYVNVHTADYPGGAIRGQL 349          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836CBG2_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG2_9STRA)

HSP 1 Score: 1016 bits (2627), Expect = 0.000e+0
Identity = 524/524 (100.00%), Postives = 524/524 (100.00%), Query Frame = 1
Query:    1 MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL 1572
            MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL
Sbjct:    1 MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL 524          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835Z777_9STRA (GH26 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z777_9STRA)

HSP 1 Score: 416 bits (1070), Expect = 4.530e-130
Identity = 241/451 (53.44%), Postives = 303/451 (67.18%), Query Frame = 1
Query:  100 ALGLELSSECCLDVAVAVSCDTS-EPPCTLAVSGEGEGAQEALEPVEE-----TAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQG--SPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDT-AGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAIT-KRTMCIAEMSSTNHCGG-KATWIKDTWATLARDYPKIVSVNWFFEDKM--NVGKDWDL 1413
            AL L+ SSECC+D     +C    + PC++ + GE     E L+P E      T  +RELR+RRXXXXXXXXXXXXXXXXXXXXXX       G K + +    PQG  + DP+C  G +D+DVQYCCP  CSRCSN+ TC NFS  EEP CCGA IA S RPC  + APC L+  +F    PG+  R A VG W +G  D  LPQ+E   G+K D+V++Y  +     W  V+ +LD    V+LVMEF D+YPNLRD+ +GK+D  ++DFGK A ADGR++ +RPLHELN  WYNW   R GN+  DF  AF+ +V+T RSTG NFK+Q+S+AAKNS +   PF+DFY GD YVDQ+CVSAYN+CGTGTY+ NKS  EIINT+Y+Q+ A    +++CIAEMS+T+ CG  KA WI D W +LA DYPK  SVNWFFE K   +  KDW L
Sbjct:  167 ALLLDASSECCVDADSLPACSADGKAPCSMQLIGE---VAEQLQPEEGDDADLTEEQRELRKRRXXXXXXXXXXXXXXXXXXXXXX-------GKKPKPKPPVKPQGGGAGDPFCLNGMLDDDVQYCCPSNCSRCSNSKTCTNFSPAEEPTCCGAMIADSGRPCGLFPAPCYLDQTKFQ-NAPGSSKRTANVGAWFAGGPDA-LPQQEQNLGVKLDTVMMYLPVGPDLKWSAVSDILDTKRQVQLVMEFYDSYPNLRDVKSGKYDQYLKDFGKDAKADGRQLTIRPLHELNGDWYNWDALRNGNNAEDFPGAFQHVVTTLRSTGGNFKFQISYAAKNSAESNMPFKDFYPGDSYVDQICVSAYNTCGTGTYKSNKSFSEIINTWYFQVTAFAPSKSLCIAEMSTTDQCGSDKAQWITDAWHSLADDYPKFTSVNWFFESKKLGSAYKDWAL 605          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836C8I3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I3_9STRA)

HSP 1 Score: 325 bits (834), Expect = 9.310e-100
Identity = 171/419 (40.81%), Postives = 228/419 (54.42%), Query Frame = 1
Query:  418 CNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYP---NLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELN----------------------SAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTY-RENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKAT------------------------------------WIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLL 1488
            C    V ED +YCC   C  CS++ +C  F   +  KCCGA I  + R C+   APC +  +RF    PG   R+  VGVW  GD    +  +E +  + F   +L+  +    WDY+AS LD    VELVMEF  + P   NL+D+  GK+D+ ++DFG+AAA DGRRI +R LHELN                        WY WG F PGNS      A+K  VS  RSTGANFKYQ+S+ A+N+   +TP + F+ GDEYVD+VCV+AYN+CGT +  R   SL  I+NT+Y Q+ A T + +CI+E+SST+HCGGK                                      W+   W  LA  YP++ S+NWFFEDK+NV KDWDLH+  E SA++ GY  FE+ T  R +
Sbjct:   71 CVLNDVREDTRYCCHVSCDVCSDSRSCARFPKNQISKCCGAHIKDNGRSCETGQAPCNVKKSRFSGNGPGTVKRDTSVGVWPGGDPKDGVKAKEKELHMHFGHQLLFADVRNLDWDYIASFLDGNRAVELVMEFNSDTPFTANLKDVIGGKYDTDLKDFGRAAAKDGRRITVRLLHELNVFKYKRQGNXXXXXXXXXXXXXGDWYPWGAFTPGNSPEKLVTAYKHAVSLLRSTGANFKYQLSYNARNAGGNSTPLKAFWPGDEYVDEVCVAAYNTCGTSSNPRMTLSLTAIMNTWYKQITAFTTKKICISEISSTSHCGGKVRAKVNCEVAAGALEIKEVPIDSLANEVNAYAMCDMPEWLLAAWKDLANKYPRVDSINWFFEDKLNVKKDWDLHTSAEKSAWIKGYKAFEAATTGRKV 489          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835ZDK0_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK0_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.620e-93
Identity = 158/314 (50.32%), Postives = 208/314 (66.24%), Query Frame = 1
Query:  613 PKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNV-GKDWDLHSPDEISAFVNGYHNFESITK-RRLLQEQQGGLGEDDSFNAEQEEL 1548
            P  PG+  RN+RVGV LSG   +V  QRE  Y ++FDS ++YQ++    W  V +VLD    V+ VMEF D   NLR IA G +D  ++ FGKAA  DGR I +RPLHE+N  WY W VF PGNS+SDF+NAFKR+VS  +STG NFK+Q+S+AA+N+     PF DFY GD YVD VCVSAYN CG  TY ENK L E +  +Y +M     +  CIAEMSST  C GK  WIKD+W TL   Y K  ++NWFF++K+++ G+DWDL+S  +++AFV+G+  F+S T  RRL  + +   GE+  F   ++ L
Sbjct:  178 PPPPGSVKRNSRVGV-LSGPRMSV-QQREKAYKVRFDSELMYQSVTDLDWGKVKAVLDDKKGVDFVMEFGDEGSNLRSIAQGAYDHYLQTFGKAAKKDGRTINVRPLHEMNGEWYPWCVFTPGNSLSDFKNAFKRVVSVLKSTGGNFKFQLSYAAQNASGHKNPFMDFYPGDAYVDAVCVSAYNLCGA-TYDENKPLAESLLPWYAEMSRSVNKPFCIAEMSSTGFCNGKDQWIKDSWKTLTYQYTKFNNINWFFQNKVDLLGRDWDLNSRADVNAFVSGFRMFKSATGGRRLFADIEPAEGEEADFEVAEDAL 488          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835ZA06_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA06_9STRA)

HSP 1 Score: 298 bits (764), Expect = 1.210e-92
Identity = 139/262 (53.05%), Postives = 183/262 (69.85%), Query Frame = 1
Query:  733 LYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGED 1518
            +Y  +    W YVAS +D    V+LV+EF+D   NL+ IA+G +DSK+R FGK AA DGR+IY+R LHE+N  WYNW  F   N+V DF+NA+K  V+  RSTGAN K+QMS+AA N+ K+ TPF+DFYVGDEYVDQVC SAYN CG  TY +NKSL ++   FY ++Q  TKR +CIAEMSST  C GK  WI  TW +LA  + ++ ++NWFFE+K N+G+DWDL++  +I AF +GY  F  +T RRL   + G   E+
Sbjct:    1 MYLPVTDLKWSYVASKIDAYGKVQLVIEFIDQGANLKKIASGAYDSKLRAFGKDAAKDGRQIYVRMLHEMNGDWYNWCAFFGDNTVGDFKNAYKHAVTVLRSTGANIKFQMSYAANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGA-TYPKNKSLEDVFGDFYTEVQTFTKRPICIAEMSSTGICKGKPAWISATWKSLATKFTRVSTINWFFENKKNLGRDWDLNTKADIHAFTSGYRLFRKVTGRRLEAIESGASAEE 261          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YSW1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW1_9STRA)

HSP 1 Score: 298 bits (763), Expect = 2.370e-89
Identity = 145/358 (40.50%), Postives = 215/358 (60.06%), Query Frame = 1
Query:  409 DPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAIT-KRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDK-MNVGKDWDLHSPDEISAFVNGYHNFESITK 1476
            DPYC  G +  +   CC  GC+ C ++     +    +  CC + IA++ R CD +  P                    +  +W           RE KY +KFDSV+LY  +    W +V + LDKG  V+LV+EF+DNY NL D+A GK+D  ++ FG  A ADGR IYLRPLHE N  WY WG+FR GNS+  F+ A++ +++  R+TG NFKYQ+S+  K+++   T F DFYVGD+Y+ Q+CVSAYN  G   Y +++SL  I+   Y Q ++    + +C+AEMS+T++ G K  WI DTW +LA  +  + ++NWF E+K ++V  DWDL++P ++ A+V+GY NF++ TK
Sbjct:  196 DPYCLKGVLHPNGAQCCKAGCTTCGSSRCA--YDALGKDACCSSVIAKNGRSCDYFPGP--------------------QQSIW----------SREAKYKMKFDSVLLYLPVQYLSWSWVKTFLDKGTGVQLVIEFIDNYSNLSDVAAGKYDGYLKKFGAFAKADGRLIYLRPLHEFNGDWYPWGIFREGNSLDAFKAAYRHVITVLRATGGNFKYQLSYNVKSANSNPTKFSDFYVGDDYL-QICVSAYNMAGA-RYPDSRSLATILGYAYAQFESFAPSKPLCLAEMSTTSYGGDKPLWITDTWKSLAYQFTAVTTINWFLENKNVDVNVDWDLNTPADVKAWVDGYWNFKTATK 519          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835ZP96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP96_9STRA)

HSP 1 Score: 294 bits (752), Expect = 9.340e-89
Identity = 146/308 (47.40%), Postives = 202/308 (65.58%), Query Frame = 1
Query:  637 RNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYP-NLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQ---------VCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESIT---KRRLLQEQQGGLGEDD 1521
            R   +G+ LSG   T + QRE  Y +KFD+V++Y  +    W YVA+ L+    V+LV+EF D+   NL+ IA+G +D  +  FG+ A  DGRRIY+RPLHE N  WY WGV+ PGN++ DFRNA+KRI+S  +ST AN K+QMSFAAKN+ K+  PF+DF+VG+EYVDQ         +CV++YN CG  TY +N+ L +I+ TFY  +   TKR +CIAE+SST  C GK  W+K +W +LA D+ ++ +VNWFFE+K ++ +DWDL+S  ++ A+V GYH F   T    R LL         DD
Sbjct:   83 RKTTIGL-LSGPQKT-MKQREKSYKVKFDAVMMYLPIQDLQWRYVANQLNDKKSVQLVIEFFDSGSGNLKKIASGAYDKYLIKFGRDAKKDGRRIYVRPLHEFNGDWYPWGVYYPGNNIKDFRNAYKRIISVLKSTRANLKFQMSFAAKNATKKKVPFKDFFVGNEYVDQASHRLKFKSLCVTSYNQCGA-TYPKNRPLKKILKTFYSSVTKFTKRPLCIAEISSTGICKGKPYWLKQSWRSLAYDFNRVTTVNWFFENKKSLHRDWDLNSKADVKAWVQGYHAFAKATGHKSRALLDSPDATANNDD 387          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836CCT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT0_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.950e-86
Identity = 156/343 (45.48%), Postives = 214/343 (62.39%), Query Frame = 1
Query:  454 CCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITK-RTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMN-VGKDWDLHSPDEISAFVNGYHNFESITK 1476
            CC  GCS+C     C N     E  CC   IA     CD  G PC++N  +    +P    R   V V LSG  ++ L  RE  Y + FD +++Y  +    W ++   LD G +V+LV+EF+D+Y NL D+A GK+D  +  FG+AAA DGR I +RPLHE N  WY WG  R GNS+ DF  AFK +V+T R+TGANFKYQ S+A KN++ + TP  ++YVGD+YVDQVCVSAYN CG  +Y  NK L  +  +FY+Q+ +    +T CIAEMSST HC GK  W+ DTW +LA  + ++  +NWF E+K++ + +DWDL+S  ++ A+V GY+ FE   K
Sbjct:  951 CCSGGCSKCGKP-DCANDPLGAE-HCCPQVIAAEALSCDIAGPPCLVNTDKPIVIDPTAVRRKTSVQV-LSGS-ESSLEDREGHYHMTFDGILVYLPVQNLNWKWIVGFLDAGRNVDLVIEFVDSYSNLADVAAGKYDRFLGKFGQAAADDGRVINIRPLHEFNGDWYPWGALRQGNSMQDFLLAFKHVVTTLRATGANFKYQQSYAMKNANNDPTPLSEWYVGDDYVDQVCVSAYNLCGV-SYPTNKPLASMYGSFYYQVLSFAPTKTQCIAEMSSTGHCEGKPQWLLDTWRSLAYQFTRVTVINWFLENKIDSLNRDWDLNSKADVEAWVEGYNEFEKGQK 1288          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835ZCD2_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD2_9STRA)

HSP 1 Score: 285 bits (729), Expect = 2.900e-86
Identity = 148/365 (40.55%), Postives = 223/365 (61.10%), Query Frame = 1
Query:  403 SPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARF-DPKNPGNPV---RNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVG-DEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNV-GKDWDLHSPDEISAFVNGYHNFESITKR 1479
            S DPYC++G +      CC + C+ C             E  CC   I  S+  C++YG PCI++  RF +P  P +P    RN+ VGV L+G  D  + +RE +YG+ FD+ ++YQ +    + Y+  V++ G  V+LV+E  DN  N   IA+G +D+++ +FG  AAA GR+I  R LHE+N  WY W  F PGNS+  F  AF R+V+  R +GA+ K Q+++AA+N+     PF DF+    +YVD+VCVSAYN CG   Y ENK L +I+  +Y Q+   T   +CIAEMSST HC GK  WI D W T+  ++ ++ ++NWFFE+K+++  +D+DL++  ++  FV+G++NF+  T R
Sbjct:   11 SGDPYCSSGKL-YGAGICCSEACAACGTQNDGCASDAAGEGSCCADVITASELSCNQYGPPCIIDEERFAEPSTPADPWSIHRNSVVGV-LTGP-DKTVAEREAQYGMTFDAELIYQNVLYLNFTYLQDVMESGKKVQLVIEINDNLAN---IASGTYDTQLYNFGLEAAAYGRKISTRILHEINGDWYPWCAFAPGNSIDQFYEAFVRVVNALRGSGADLKIQLAYAAQNAAGYDNPFIDFFEPIKDYVDEVCVSAYNLCGD-KYSENKPLRDIMGEWYKQVTWFTDLPICIAEMSSTGHCEGKPAWIADAWDTITNEFTQVRTINWFFENKIDLLNRDYDLNTSSDVQQFVDGFNNFKYATSR 368          
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835Z8N1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N1_9STRA)

HSP 1 Score: 265 bits (677), Expect = 4.170e-78
Identity = 139/373 (37.27%), Postives = 212/373 (56.84%), Query Frame = 1
Query:  409 DPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPG----NSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGE 1515
            DP C  G +++D   CC + C +C     C  F+      CC   I  +++ C +Y APC++ A    PK      R   VGV   G   T L  RE +YG+K DS++++Q +    +D+VA+ +++G  V+LV+EF     +L+DIA G  D  + DF   A  DGR+ Y+RPLHE N  WY WG++  G    + +SDF+ A+K IV+ FR+  A  ++Q  +   N   + TPF++FYVGD+YVD VC S YN  G   +    +  ++   FY QM   T + +CI+EMS+T++   K  WIKDTW+++A  + +I +VNWF E+K +   +WDL++  E  A++NG ++F S T  R    Q G  G+
Sbjct:   51 DPACANGILNKDGSVCCTKPCGQCGGT-GCNTFTGGSS-NCCAGPIRTANKSCTQYAAPCVMGATSGTPKPT---TRKTMVGVQPGG---TPLGTREGQYGVKVDSLLMFQKVTDLHFDWVATEMNRGHTVQLVLEFFGT--SLKDIAAGGSDGVLSDFANKAKTDGRQFYIRPLHEFNGDWYPWGIYVDGTLHTDLLSDFKAAYKHIVTIFRNAKAPVQFQQGYNNSNPRDDKTPFKNFYVGDDYVDMVCFSLYNFAGIPNHSSG-TFTKLAGDFYNQMTLATSKDLCISEMSTTSYGVDKPAWIKDTWSSIANQFTRITTVNWFLENKPD--GNWDLNNGPEQQAWINGLNSFRSTTAVRRAALQLGAPGD 410          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9E5_9STRA5.860e-70100.00CHRD domain-containing protein (Fragment) n=1 Tax=... [more]
A0A835YML2_9STRA7.130e-4990.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C9W3_9STRA8.480e-3764.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYA4_9STRA4.890e-2757.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YI34_9STRA9.610e-2547.62CHRD domain-containing protein n=1 Tax=Tribonema m... [more]
A0A397NQ64_9SPHN3.350e-1844.76CHRD domain-containing protein n=1 Tax=Hephaestia ... [more]
A0A535UIK2_9CHLR5.920e-1639.81CHRD domain-containing protein n=1 Tax=Chloroflexi... [more]
UPI001EF6F7678.130e-1645.19CHRD domain-containing protein n=3 Tax=Frankia Tax... [more]
UPI001B83835D2.020e-1540.95CHRD domain-containing protein n=1 Tax=Sphingomona... [more]
A0A5C6ULP5_9SPHN2.700e-1540.95CHRD domain-containing protein n=2 Tax=Sphingorhab... [more]

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BLAST of jgi.p|Trimin1|350486 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBG2_9STRA0.000e+0100.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z777_9STRA4.530e-13053.44GH26 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836C8I3_9STRA9.310e-10040.81Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZDK0_9STRA1.620e-9350.32Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZA06_9STRA1.210e-9253.05Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YSW1_9STRA2.370e-8940.50Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZP96_9STRA9.340e-8947.40Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CCT0_9STRA1.950e-8645.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCD2_9STRA2.900e-8640.55Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z8N1_9STRA4.170e-7837.27Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_64contigContig_64:421121..424756 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350486|estExt_Genemark1.C_Ctg_640050
DescriptionCHRD domain
COG categoryS
Max annot lvl204457|Sphingomonadales
EggNOG OGs2EA9M@1|root,334E1@2|Bacteria,1ND0N@1224|Proteobacteria,2UIJ1@28211|Alphaproteobacteria,2K8CC@204457|Sphingomonadales
Evalue8.7e-16
Seed ortholog1123270.ATUR01000010_gene1903
Hectar predicted targeting categoryother localisation
TranscriptId350808
TrackFilteredModels1
ProteinId350486
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350486gene_10120Tribonema minus UTEX_B_3156 geneContig_64 421121..424756 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350486Trimin1|350486|estExt_Genemark1.C_Ctg_640050Tribonema minus UTEX_B_3156 polypeptideContig_64 421123..424756 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10120_4exon_10120_4Tribonema minus UTEX_B_3156 exonContig_64 421121..421158 -
exon_10120_3exon_10120_3Tribonema minus UTEX_B_3156 exonContig_64 422077..422205 -
exon_10120_2exon_10120_2Tribonema minus UTEX_B_3156 exonContig_64 423208..423340 -
exon_10120_1exon_10120_1Tribonema minus UTEX_B_3156 exonContig_64 424743..424756 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10120UTR3_10120Tribonema minus UTEX_B_3156 three_prime_UTRContig_64 421121..421122 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10120CDS_10120Tribonema minus UTEX_B_3156 CDSContig_64 424743..424756 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10120 ID=mRNA_10120|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=314bp|location=Sequence derived from alignment at Contig_64:421121..424756- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACCGATGGACCGGGCGACGCCACAGGCCAAGGCACTGCGAAGATTGTCCT
GCAGGGCCAGAAGCTGTGCTTTGTCCTTACCACCAACCTCGAGGGCATCG
TTGCGGGGCACATTCACAAGGGCGCCGTCGGCGTTGACGGGGACGTGTTT
ATCGACCTGCTAGGAGCCCTTGCGGACCTGATCAAGAATCCCCTCAAGGC
CTGCCTCCAGTTGAGCACTGCTGAGGCGCAAGCTCTGCTGACAGATCCAG
CCGGCTACTACGTCAATGTGCATACGGATCAACATCCGGGTGGCGCCATC
AGGAGTCAACTTAG
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protein sequence of jgi.p|Trimin1|350486

>Trimin1|350486|estExt_Genemark1.C_Ctg_640050 ID=Trimin1|350486|estExt_Genemark1.C_Ctg_640050|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=104bp
TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVF
IDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAI
RSQL
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mRNA from alignment at Contig_64:421121..424756-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10120 ID=mRNA_10120|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3636bp|location=Sequence derived from alignment at Contig_64:421121..424756- (Tribonema minus UTEX_B_3156 )
ACCGATGGACCGGGGTAGGTTACGCGCAGCAATCGCGGCGCATGTATGTA TGTATGTGTGCAGTCGTGTCGCGCTTGAGCACAACGAGGTGCGCGCCCAC ACAAGCTGAGATGCGCTGAGGTAGCCTCATCTGAAGTGGGTTGTTGCAGT TTGGGACGCCCGTGCCTTGAAGCGGTTGGCCGATGTACACCGTAGCACCT CCACCAATGACGGGTTGGTTTGTGCGTGGCACACCAAAAGGTGCTTGCGC CCTGGCAATCCCTAGCTCTAAAGGTACATCCTGGTGTAGGGCAACTGTCG CAGGATCATCCGCGCATGTGAGCTCGCACCGTGATGCCACACATCCTCTG ACGTGATTCACTTACGTCTTGTCATGCCAGCCTAATCCTAACTCTAACCT TGGATGCCGGAGTACCCGCATCTAACTACCACACCAATGACGGCCATAAT TTATATCAGCGCCTATGGCGACCTCGTAGACGCGATGATGCCTCGCATGA CACTGCTACATGTAGCTGTACGACGTAGCAGGCACAGAGGCTGCCGCTGT CACAGTGCGTTGGTTTAACGCAGACAGGCATAATTGGAAGTGAGATGGAG AGACAGGCAGCGAAGCCGCCCATCACCGCTGCTGCGGAGCACTGCGTTGG GGTAGGTAGGTATGTGAGCGAAGTTGCCCGTCACTGCGCTGTTGCAGTGC TCCACCAAATGTGGGGCAGAGAAACAACCAGTGAAGTCGGCAAACATCAC TCATGCGGAGTCTTGCCGCAGGGGTACCACAGTATGTGCTGTATGCGTGT AGCTGGCGCGGCTGCCGCCCTCTGCTTGACTTACTAAGTAGGTTTCAGAG AATTTTAGCACCACAATGGTGCTCCTGAGCACTTCTTCCGGTGCCCCTTG ACCACTGCTCCCAGTAAGCCGAACAGTGCTGCTGCCCAGGCAGCACCACA GGCCCTAGTGACGGGGGCAGCACCACAGGCCCTAGTGATGGGGGGTGCTG CAGCTCAGTATAGAATGAGCTCCGTGTCGCGGAATGCATCGAAACTAGCT TCCTGCATCTCATGATCTCTCGATGTGTCACTGCGCTGTCAGATGGCAGC CTGTGCACCATCTCTTACTGCCTCCAGCAGACTGACATGACAGAGCTGCT AGTATCTGCAAAAAGGTGAGGGGTGACCTGTGACAACTCTCTAACGCTTC ATAGTGTACATCGCAGTACAGTACCGCAGATATCCCCTACTCAATTGAGC CAAGCACCGTAGCACGAGCTTTGGAGCTGTGCCGAGCGCTGCTCCCTGTA CGACGAGCACTGCTGCTGCCTGCGCAGCACCACAGGCCCTGTTCCATCGC AGCAATCTTGCGCTCATCTTCAAATGCTCTCATTTTCAACTTCAACTTCA ACTCCTGCTACTGCAGCGACGCCACAGGCCAAGGCACTGCGAAGATTGTC CTGCAGGGCCAGAAGCTGTGCTTTGTCCTTACCACCAACCTCGAGGGCAT CGTTGCGGGGCACATTCACAAGGGCGCCGTCGGCGTTGACGGGGACGTGG TGAGTGACGCTCCGCATGAGAAAATGAAGTACAGCTTTTGAGGTACGGCG AGTGACGCTCTGCATGACATGTTGAAGTACAGGGATGTGGTGAGTGGCGC TCCGCATAAGAAATTGAAGTACGGTTTTTGAAGTACAGCGAATGACGATC TGCATGCGCTGCGCGCCACGCTTTGGAATACAGTTTGTGAAGATTGTAAA CCATGCGGTGAATGACGTTCTCGTGTACGCTGCACGTCACCTCTGAAGTA AATTGAGGCCAACAGGGGGGATCTTCAGATGCACGAACGCGCAAAGGCGC TCAGCGCTGACGCAGCATTCTGCTGGCGTGATGTGCAAAGCAGTGCCACT GCCGGAAAGATGTCGTGTAGCAGGTGTTCAGCCAGGCGCACCGCTGCAAC AGCCTGCCTGACCCTCAGGTGTCTGGGCATCAGCTTTGCTACCCTACAGT ACAAGGATGCTGCACAAGACCCAGATATACTACCATGTTGTAAAGCTGCA TGGCCGGAAGCAGCGTTAGCAAGTGGTGACTAGCGTTTTGGCATTCTTGG AAGCGGCTCTTTTCTTTCAGTGGTCACAGGGCACAGAGCAGTGTGCAAGT CATGATGAGGCCGAATGTGAATGTAGTGCTTAGTATATGAATGGAATGAA TTCCCGAGCGTGCTTCACCGCCCCTGGTGGCCACCCTTATATCTGCTCTG TCGGAAGCTGCAGCGTACCATGTTGCCAGAGTAGTGCTAGCTTCTGGGCC CCCGATCATCCCCTGTATTGTGTTCAAATACGAAATGCAGCTCAATGTCC GCACCTGCTTTTGAATACCTTGGCAACCGTGCATTTCTCGGATTTCAACA TATAGGCAGAAGCAATTTTACATGTGATAGCGGTAGCACTTTCTTTGCCG CACAACCGTTTGTCGTCCACTGTCACAAACTGCCAAACTGCTCATGCCTC TCTGGCCTCTACTGCTGCATGGGCGCTGACGGCGTGCATCTTTGCGCGCA GTTTATCGACCTGCTAGGAGCCCTTGCGGACCTGATCAAGAATCCCCTCA AGGCCTGCCTCCAGTTGAGCACTGCTGAGGCGCAAGCTCTGCTGACAGAT CCAGCCGGCTACTACGTCAATGTGCATACGGTGAGCTCCTGGTCGCAGAG TAAGAGCAACAAGCAGTAACAGGTGAAACCTGTATCGGCGACATTAGCAT ACATGCACGTGTGCCTGTGTCGGGGTAAGGGCAACCGCATATGTAAGGAT ACCTGGAAGCATGTATTACGCGTGGGTGCATGCGCTGCACTCATGGATTT TGCCATTGCCATGATAGCATTGAGCAAGCGCAGACAACCGCACGCATGCA TAGGTGCATGAGCATGTACACCACGGCTAACACGGCTAACAGATAGAGAG CTGTCCCAGCATACAGGCCTTGTCATGGTCGCTGAGCACGCATGGATCGG CTTGCCAGACGCAGTGTGGACTGTGTGAGCAACCGCAGTACATGCTAAAG AATGCCGAGCGAATGATCGACTTCCAGTTAGGCCGGGCAGCACACTGCAC ATGCTGCTGGTGCTCATGGCCCCGAGCTGCCTAGAGCTGTCCCGCTCCAT CATCAAGTCGATTCTAAAAAAAGTCTTACATTGCATTCCCACTCATCAGG CCCTGTGCAACATAACACGTGGCCTGAAGGCTTTTGATGATGCTGCTCTA TTCACAGTGTGCTACTCCAAAGTATACATATCAAGCATGTATGTAAGTAT ACTCAAAGTGCGTGCTCTATGTGCGTGATTGCTCATTGCTTTCCGCATGT ACGTGAGAGAGGACCTGCGCAGGCTCATGCATACATCTCGACACCAAGCT TCTATGCGTGTGTTTACAACGCATGCATGCGCAGGATCAATATCCCGGTG GCGCCATCAGAAGTCAACTGAGTGGCACAGCTCCCGCTTTCCGCATGTGC GTGAGAGAGGGCATACGCAGGTCCATGTTTACATGCTTTCATTCATTCTT ATGTGGATCATACGTTTAAAGTCATACGAACGATGCATGTGTGTGCAGGA TCAACATCCGGGTGGCGCCATCAGGAGTCAACTTAG
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Coding sequence (CDS) from alignment at Contig_64:421121..424756-

>mRNA_10120 ID=mRNA_10120|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=312bp|location=Sequence derived from alignment at Contig_64:421121..424756- (Tribonema minus UTEX_B_3156 )
ACCGATGGACCGGGCGACGCCACAGGCCAAGGCACTGCGAAGATTGTCCT
GCAGGGCCAGAAGCTGTGCTTTGTCCTTACCACCAACCTCGAGGGCATCG
TTGCGGGGCACATTCACAAGGGCGCCGTCGGCGTTGACGGGGACGTGTTT
ATCGACCTGCTAGGAGCCCTTGCGGACCTGATCAAGAATCCCCTCAAGGC
CTGCCTCCAGTTGAGCACTGCTGAGGCGCAAGCTCTGCTGACAGATCCAG
CCGGCTACTACGTCAATGTGCATACGGATCAACATCCGGGTGGCGCCATC
AGGAGTCAACTT
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