Trimin1|350464|estExt_Genemark1.C_Ctg_630070 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350464
Unique NameTrimin1|350464|estExt_Genemark1.C_Ctg_630070
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length399
Homology
[Close]
BLAST of jgi.p|Trimin1|350464 vs. uniprot
Match: A0A836CBD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD9_9STRA)

HSP 1 Score: 749 bits (1934), Expect = 1.570e-272
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0 
Query:    1 MRLEDAAEVRFRSEQQKQKGNIKAVSRAVRVLNNIVGSATTLGDMFGQVSSPPVFQHDDDFDDADTETAAALSSPSDALPDASQSSISVNVTGINGTSVSVDKLKRVATRGQVGCATVIDGPFTQLEEYMQTPVSQYSTLDDKLITRLDDETFRLAVPLASYVGLDLTPTVDVAVDTSAVQRERLLRMHSLGSTLYGTSSDTAALGKPQVLAPRGWGRRLAQQERRRRQRRKARITEGKPEWFEVSFEAKVRWSEGMRRDLMTEGAFLGLAQRNATAEGACTLACGVDVEVAVVLPPPFSKVMPRGVVGGAMRVVLRAVLSALAPALLSYLAQDYERRSGMQQRSTPLISHDSSVEDAEFDGEVPNLGLDEANFNDVDADFDEGDEEDDEEWFSDSDD 398
            MRLEDAAEVRFRSEQQKQKGNIKAVSRAVRVLNNIVGSATTLGDMFGQVSSPPVFQHDDDFDDADTETAAALSSPSDALPDASQSSISVNVTGINGTSVSVDKLKRVATRGQVGCATVIDGPFTQLEEYMQTPVSQYSTLDDKLITRLDDETFRLAVPLASYVGLDLTPTVDVAVDTSAVQRERLLRMHSLGSTLYGTSSDTAALGKPQVLAPRGWGRRLAQQERRRRQRRKARITEGKPEWFEVSFEAKVRWSEGMRRDLMTEGAFLGLAQRNATAEGACTLACGVDVEVAVVLPPPFSKVMPRGVVGGAMRVVLRAVLSALAPALLSYLAQDYERRSGMQQRSTPLISHDSSVEDAEFDGEVPNLGLDEANFNDVDADFDEGDEEDDEEWFSDSDD
Sbjct:    1 MRLEDAAEVRFRSEQQKQKGNIKAVSRAVRVLNNIVGSATTLGDMFGQVSSPPVFQHDDDFDDADTETAAALSSPSDALPDASQSSISVNVTGINGTSVSVDKLKRVATRGQVGCATVIDGPFTQLEEYMQTPVSQYSTLDDKLITRLDDETFRLAVPLASYVGLDLTPTVDVAVDTSAVQRERLLRMHSLGSTLYGTSSDTAALGKPQVLAPRGWGRRLAQQERRRRQRRKARITEGKPEWFEVSFEAKVRWSEGMRRDLMTEGAFLGLAQRNATAEGACTLACGVDVEVAVVLPPPFSKVMPRGVVGGAMRVVLRAVLSALAPALLSYLAQDYERRSGMQQRSTPLISHDSSVEDAEFDGEVPNLGLDEANFNDVDADFDEGDEEDDEEWFSDSDD 398
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350464 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CBD9_9STRA1.570e-272100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018971Protein of unknown function DUF1997PFAMPF09366DUF1997coord: 126..337
e-value: 4.1E-18
score: 66.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..398
NoneNo IPR availablePANTHERPTHR34131:SF3(RAP ANNOTATION RELEASE2) GALACTOSE-BINDING LIKE DOMAIN CONTAINING PROTEINcoord: 120..347
NoneNo IPR availablePANTHERPTHR34131FAMILY NOT NAMEDcoord: 120..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_63contigContig_63:600156..602627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350464mRNA_10315Tribonema minus UTEX_B_3156 mRNAContig_63 599905..602627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350464|estExt_Genemark1.C_Ctg_630070 ID=Trimin1|350464|estExt_Genemark1.C_Ctg_630070|Name=jgi.p|Trimin1|350464|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=399bp
MRLEDAAEVRFRSEQQKQKGNIKAVSRAVRVLNNIVGSATTLGDMFGQVS
SPPVFQHDDDFDDADTETAAALSSPSDALPDASQSSISVNVTGINGTSVS
VDKLKRVATRGQVGCATVIDGPFTQLEEYMQTPVSQYSTLDDKLITRLDD
ETFRLAVPLASYVGLDLTPTVDVAVDTSAVQRERLLRMHSLGSTLYGTSS
DTAALGKPQVLAPRGWGRRLAQQERRRRQRRKARITEGKPEWFEVSFEAK
VRWSEGMRRDLMTEGAFLGLAQRNATAEGACTLACGVDVEVAVVLPPPFS
KVMPRGVVGGAMRVVLRAVLSALAPALLSYLAQDYERRSGMQQRSTPLIS
HDSSVEDAEFDGEVPNLGLDEANFNDVDADFDEGDEEDDEEWFSDSDD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018971DUF1997