mRNA_10274 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350439
Unique Name	mRNA_10274
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835YMP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP6_9STRA)

HSP 1 Score: 854 bits (2207), Expect = 2.730e-312
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 1

Query:  226 MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAALWHSPGCRNFWRNDGKPHEGENVVVWEMENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTSGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTGAP 1467
            MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAALWHSPGCRNFWRNDGKPHEGENVVVWEMENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTSGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTGAP
Sbjct:    1 MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAALWHSPGCRNFWRNDGKPHEGENVVVWEMENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTSGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTGAP 414

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A836CLL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL4_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.080e-68
Identity = 112/120 (93.33%), Postives = 112/120 (93.33%), Query Frame = 1

Query:   46 GTRSQPWGAPANCPYGVCWVWWRHVKEQNPVPCNVVPGPCKYRHSDT*GGGPLSLRERGPMAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAG 405
            GTRSQP GAPANCPYGVCWVWWRHVKEQNP PCNVVPGPCKYRHSDT GGGPLSLRERGPMAAAVTREAAEVW L RRRPQELRGVRVQP  GSAGRCGQPEE GQPHGAVALAAVSIAG
Sbjct:  330 GTRSQPRGAPANCPYGVCWVWWRHVKEQNPAPCNVVPGPCKYRHSDTKGGGPLSLRERGPMAAAVTREAAEVWGLTRRRPQELRGVRVQPDRGSAGRCGQPEETGQPHGAVALAAVSIAG 449

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A836CHK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHK8_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.050e-67
Identity = 128/274 (46.72%), Postives = 169/274 (61.68%), Query Frame = 1

Query:  757 ERAALWHSPGCRNFWRNDGKP-HEGENVVVWE-----MENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCT-------------------SGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELF--------------RLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTG 1461
            +RAAL+HS  CRNFWR+D +P ++ E ++VWE     M  +      P  T V++CP++NLVYV NVKAGS+T+  +LS  + CT                    GL+  EC+  R+RT WLD+ ++SG  FFS+VREPIARF+SGY QAV++ D  L    + EY+E +              RLSG DA+ RQVPMHF+ASL NLE D+  LW+ LGL PL  FP  R A  D +KAALDT L+  +++ +CAHL QDF+CFGY LP  C G
Sbjct:   33 QRAALFHSRECRNFWRHDTRPEYDQEPMLVWENRIYAMMPKDKRPASPPLTDVVWCPKLNLVYVDNVKAGSTTMMGILSREYNCTWHTHTRWPPAQARLARAQCKGLSHDECQDRRSRTDWLDDAVLSGATFFSIVREPIARFQSGYKQAVTM-DAKLANLTIAEYVEEYKLKYLNEHTLTQSRRLSGWDAHNRQVPMHFIASLENLEHDMAALWARLGLAPLAAFPRMRAAEMDASKAALDTRLTPVQVRVLCAHLAQDFVCFGYALPEACRG 305

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835YTQ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTQ8_9STRA)

HSP 1 Score: 222 bits (565), Expect = 6.830e-66
Identity = 125/197 (63.45%), Postives = 131/197 (66.50%), Query Frame = 1

Query:  226 MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYR---------------YNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAAL 771
            MAAAVTREAAEVW L RRRPQELRGVRV+PGIGSAGRCGQPEEAGQPHGAVALAAVSI                            ADEVGGLIAAHDG MV VVESLG+        +     G   GY                YNDLVVVDLRLQFGWRSSPGWWSLAGGAIE WYRCRWTTEPDAAYRE++ +
Sbjct:    1 MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEEAGQPHGAVALAAVSI----------------------------ADEVGGLIAAHDGNMVKVVESLGVGNDHMVLAVIASFFGRGEGYPRLQELLDVVAHGVPVYNDLVVVDLRLQFGWRSSPGWWSLAGGAIERWYRCRWTTEPDAAYREKSCI 169

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835ZDX2_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX2_9STRA)

HSP 1 Score: 223 bits (567), Expect = 5.850e-60
Identity = 131/279 (46.95%), Postives = 161/279 (57.71%), Query Frame = 1

Query:  739 PDAAYRERAALWHSPGCRNFWRNDGKPHEGENVVVWE-MENERDEYE------GPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTS------------------GLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAV-SVPDTPLWGTPLKEYLELFR--------------LSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 1455
            P AA +  AA         F+  DG   +   +V WE +  E + Y+      G   TY+IYC +  L YV N KAGSST  +VL+ +F CTS                  GL+  +C + RART WLD+  ISGM FFSVVREPIARFKSGY QAV S P+  L G  + EYL  +R              LSG DA GRQVPMHF+ASL NLE DL  LW  LGLPP+  +PH R    DPNKA LDT+L+  +++++C HLMQDF+CFGY LP EC
Sbjct:  769 PTAAPKSSAATAAQDMLSTFYLPDGAADDEAALVAWEGVHAELEVYDRDHMPLGMEATYIIYCREQMLTYVLNQKAGSSTTASVLNEHFHCTSTQHDWVPEHIKQRRCYDSGLSSEDCERRRARTDWLDDGSISGMNFFSVVREPIARFKSGYQQAVTSTPE--LQGWTISEYLAEYRKFPVNEHTHTQARNLSGRDALGRQVPMHFIASLENLEHDLTLLWDELGLPPMAHYPHARSKEDDPNKAVLDTTLTADQMRELCDHLMQDFVCFGYTLPEEC 1045

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835Z9Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q3_9STRA)

HSP 1 Score: 192 bits (489), Expect = 5.200e-55
Identity = 103/222 (46.40%), Postives = 136/222 (61.26%), Query Frame = 1

Query:  883 YPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTS-----------------GLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELF--------------RLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 1455
            Y T ++YCP+  LVYV NVKAGSSTI+A+L  +F C S                 GL+   C  +RA+T WL  D ++G  FFS VREP+ RF SGY QAV+     +    + EY++ +              RLSG DA+G+QVPMHF+ASL  L  DL  L + LGLPP+ +FP  R AA DP+KAALDT+L+  +++ +C HLMQD++CFGY LP EC
Sbjct:    2 YSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAAT-VEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMEC 222

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835YYH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYH3_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.870e-47
Identity = 103/243 (42.39%), Postives = 142/243 (58.44%), Query Frame = 1

Query:  835 VVVWEMENERDEYEGPYP--TYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCT---------SGLTEAEC-----RKIRARTTWLDNDLISG---MLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELF--------------RLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAA---LDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 1455
            ++VWE   +      PY   T ++ C +  LVY+ NVKAGS+ + AVL + F CT           L+ A+C     RK RA T W +++ ++G   MLFFSVVREPI RF SG+ QA+ + D  L    +  ++  +              RLSG D  G QVPMHF+AS+ NLE D+  L++  GLPP+ +FP  R AA DP KA+   L T+L+ A+++ +CAHLMQDF+CFGY LP EC
Sbjct:    1 MLVWENHGQ------PYTFGTDMVVCKKAGLVYIDNVKAGSTAVQAVLGTRFGCTWTRHNNWAPPELSRAKCWGLKPRKCRATTQWFEDETVTGDPGMLFFSVVREPIDRFVSGFKQAL-LQDKALRNETISSFIRSYQYASMNEHTQTQARRLSGRDKAGNQVPMHFIASMENLEHDVAALFAHRGLPPVDEFPRMRAAARDPFKASRAELGTALTTADVRLLCAHLMQDFVCFGYLLPQEC 236

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835ZE79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE79_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.810e-45
Identity = 101/201 (50.25%), Postives = 117/201 (58.21%), Query Frame = 1

Query:  997 GLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMH----------FVASL--GNLEADLQTLWSTLGLPPL--------------------------------RDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTGAP 1467
            GLTEAECRKIRART WLD+DL+SGMLFFSVVREPIARFKSGY++AVS PD  L G PLKEYLE +R    D   R +  +          + ASL   +   D       L LPP                                 +D+ H REAA DP K  LDTS++ AELQ+VCAHLMQDF+CFGY LPPECT +P
Sbjct:    7 GLTEAECRKIRARTDWLDDDLMSGMLFFSVVREPIARFKSGYLEAVSAPDNRLSGMPLKEYLEHYRCRRCDICRRLLLFYHAPQAAAVAPYAASLLLRHASPDAAAAPPALPLPPRLPQRLRRWPVGAINEHTHTQARSLSGRDANNKQDYTHAREAARDPIKTTLDTSMTPAELQEVCAHLMQDFVCFGYPLPPECTESP 207

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A836CCV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV7_9STRA)

HSP 1 Score: 174 bits (440), Expect = 5.490e-43
Identity = 93/122 (76.23%), Postives = 98/122 (80.33%), Query Frame = 1

Query:  190 GGGPLSLRERGPMAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGM 555
            GGGPLSL+ERGPMAAAVTR AAEVW L RRRPQELRGV VQPGIG+AG  GQPEE  +           + GL AEMRARWRCYQAMAGKSLLPLSSLADEVGGLI AHDG MV VVESLG+
Sbjct:  205 GGGPLSLQERGPMAAAVTRVAAEVWGLTRRRPQELRGVWVQPGIGNAGHRGQPEEESRS---------GVPGLAAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIVAHDGNMVKVVESLGV 317

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A836CGN9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.370e-35
Identity = 85/209 (40.67%), Postives = 117/209 (55.98%), Query Frame = 1

Query:  931 GNVKAGSSTINAVLSSNFKCT-------------------SGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSV-PDTPLWGTPLKEYLELFRLSG--------------SDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 1455
            G   AGS+TI  +L  ++ CT                    G    EC + R+RT WLD+ ++   +FFSVVREP++RF SGY QAV+   D   W   + +Y+E +R+                 DA+GRQ+PMHF+ASL NLE DL  LW+ LG+PP+ +F   R A  D  K  L+T L+  +L+++C HL QDF+CFGY LP EC
Sbjct: 1285 GGGGAGSTTIMGILERDYNCTWHTHMEWPEEQARIARQRCVGAMPEECFQKRSRTDWLDDSVLERAVFFSVVREPVSRFVSGYKQAVAAYEDVGNW--TMTQYMEAYRVRSVNEHTLTQTRRIGVDDAHGRQIPMHFIASLENLEEDLALLWAHLGVPPIENFLRMRSAQTDSRKYHLETRLTADQLRELCWHLGQDFLCFGYPLPSEC 1491

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A836CAX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX2_9STRA)

HSP 1 Score: 644 bits (1662), Expect = 1.230e-215
Identity = 842/847 (99.41%), Postives = 842/847 (99.41%), Query Frame = 1

Query:    1 MARTKGKAQQQEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEPKQARKELPELPNMLDQAQVETAVEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKLPERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIYISQALDKDLNLRNVTGKQKQLPAPKRKRAKNGAEDXXXXXXXXXXXGEVEATPAKPAAKKQKTNSGGSAPXXXXXXXXXQKGKGKKGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAQAPAAAAXXPAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAEKGGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAAPAXXXXAPAAEVQAPSGGGKAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAKAAKKRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKKAKTDGSGASAXXAPXXXXXXXPAGATRKRAKA 2541
            MARTKGKAQQQEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEPKQARKELPELPNMLDQAQVETAVEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKLPERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIYISQALDKDLNLRNVTGKQKQLPAPKRKRAKNGAEDXXXXXXXXXXXGEVEATPAKPAAKKQKTNSGGSAPXXXXXXXXXQKGKGKKGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAQAPAAAAXXPAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAEKGGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAAPAXXXXAPAAEVQAPSGGGKAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EPAKAAKKRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KKAKTDGSGASA XAP XXXXXXPAGATRKRAKA
Sbjct:    1 MARTKGKAQQQEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEPKQARKELPELPNMLDQAQVETAVEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKLPERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIYISQALDKDLNLRNVTGKQKQLPAPKRKRAKNGAEDXXXXXXXXXXXGEVEATPAKPAAKKQKTNSGGSAPXXXXXXXXXQKGKGKKGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAQAPAAAAXXPAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAEKGGKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAAPAXXXXAPAAEVQAPSGGGKAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPAKAAKKRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAKTDGSGASAAXAPSXXXXXXPAGATRKRAKA 847

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: D7G5C3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 8.490e-31
Identity = 83/261 (31.80%), Postives = 131/261 (50.19%), Query Frame = 1

Query:  286 ASKTQLFEDANIITXXXXXXXXXAHIAMRKLPERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIY 1068
            A K  L ED   +          A I++ K+P  +  KP  I IPHP R +E+C +CLIV+D A   +++  E +PV GLT ++ L +++ +Y  FKD+RELL+Q DLF+ DD                   I   +T+ LGK F+   + P  +K+ + ++  + +A ARD+ FL  + G+                         C  VK+ NT+M+   +  N+M GVA     IP KW N+++INI+    ++LP+Y
Sbjct:   25 AGKQSLIEDEGEVVL--------AQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDR------------------ILPMLTKALGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGD-------------------------CWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVY 234

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: W7TFQ3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.840e-20
Identity = 74/249 (29.72%), Postives = 121/249 (48.59%), Query Frame = 1

Query:  361 IAMRKLPERIAHKPRFIRIPHPFRVK-----EECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKL-SALPRAVA-------AARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIY 1068
            IA+ K+PER++ KP  + +PHP         E+ ++CLIV++     VQ+ L    + G+  V+ L +++ +Y +F+++R+L    DLF+ DD                   I   + + LGK F +K + P A+K+  L S+ P+A+A       AA+  T L  N GN                         CL VKV  T+   A+  ANV+ G+  A    PGKW N+ +I+++  S ++LP+Y
Sbjct:   99 IALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDR------------------ILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGN-------------------------CLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLY 304

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A024G4U6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4U6_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.130e-19
Identity = 81/291 (27.84%), Postives = 141/291 (48.45%), Query Frame = 1

Query:  202 LDQAQVETAVEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKLPERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIYIS 1074
            +D+AQV     KAV AL  Y+ K+     +K QL E+   ++           I  +K+P + + KP  I +PH  R + E  +CL+V+D   E V+K L+  PV GLT V+TL +++K + +F+D+R L+  +DLF+ DD                   I  ++   +GK FI   + P  V++++ +   + + A    TF+ ++ G                          C+ +++ +  MS   I  N+M G+   A++I  KW+ IQ+I+++    ++LPIY S
Sbjct:    9 MDEAQVR----KAVIALQIYIEKQKKDR-TKQQLIEENQSLSCI---------IQRKKIPSKASLKPIPIELPHAIRKQPE--MCLLVKDTDKERVKKILKEDPVEGLTKVMTLKKLRKNFTRFEDRRTLVGAYDLFLADDR------------------ILPYLKSPVGKVFIRVKKQPVPVRISRAN-FTQNLRAVEKQTFMFVSCGA-------------------------CMNIRIAHFGMSVDQIVENIMVGMQRCASLIGKKWNGIQAIHLKTNESVALPIYYS 239

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BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A6A4D992_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D992_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.840e-19
Identity = 86/294 (29.25%), Postives = 136/294 (46.26%), Query Frame = 1

Query:  190 LPNMLDQAQVETAVEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKL-PERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIY 1068
            L N LD+AQV     +AV AL  ++AKK +   SK  L EDA  ++           I  RKL P + + KP  + +PHP    E   ICL V+D   + +++ L   PV G+T V+T+ +++K + +F+DKR L A +D+F+ DD                   +  ++   LG  F AK + P AV+V++ S       A+R   F  ++ G                          C  VKV   +M+   I  N+M  +   A ++P  W+ +QSI I+    ++LP+Y
Sbjct:   10 LRNPLDEAQVR----RAVLALQTFVAKK-SEERSKAPLVEDAEFVSC----------ILTRKLVPGKTSLKPIPVNLPHPLH-DENAEICLFVKDEDKKRIKEALAKDPVAGITKVMTVKKLRKNFSRFEDKRALAAAYDMFLADDR------------------VLPYLKGHLGTKFFAKKKQPVAVRVSRKSVAASLRLASRRTAF-HVSAGV-------------------------CNNVKVARLDMTPEQIVDNIMVAMNSCANLVPKGWNGVQSIGIKTSDSVALPVY 243

[Close]

BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A0P1AN32_PLAHL (Low quality protein: ribosomal l1 domain-containing protein 1-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN32_PLAHL)

HSP 1 Score: 99.4 bits (246), Expect = 1.140e-18
Identity = 79/293 (26.96%), Postives = 138/293 (47.10%), Query Frame = 1

Query:  190 LPNMLDQAQVETAVEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKLPERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIY 1068
            L N LD+AQV     +AV AL ++ AK+     +KT L ED+++I+           +  + +P + + KP  I +PH  R  E   ICL V+D   + +++ L+  PV G+T V+++ +++K + QF+DKR L   +D+F+ DD                   +  ++   LG  F  K + P AV+V++ +       AA+   F  ++ G                          C  VKV   +M+   I  N+M  +   A ++P  W+ +QSIN++ +  ++LP+Y
Sbjct:   10 LRNPLDEAQVR----RAVLALQQFAAKRNEKR-TKTALVEDSDLISCI---------LTRKVVPAKASLKPIPITLPHAIR-DESADICLFVKDEDKKRIKEALDKDPVQGVTKVMSVKKLRKNFSQFEDKRALAGAYDMFLADDR------------------VIPYLKGPLGSKFFTKKKQPIAVRVSRKNVTSSLRLAAKRTAF-HVSAGV-------------------------CQNVKVARLDMTIEQIVDNIMVAMNSCANLVPKGWNGVQSINLKLVDSVALPVY 243

[Close]

BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A225WZF5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZF5_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.160e-18
Identity = 88/294 (29.93%), Postives = 134/294 (45.58%), Query Frame = 1

Query:  190 LPNMLDQAQVETAVEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKL-PERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIY 1068
            L N LD+AQV     +AV AL  + AKK    A KT L ED   ++           I  RKL P + + KP  I +PH     E   ICL V+D   + +++ L   PV G+T V+T+ +++K + +F+DKR L A +D+F+ DD                   +  ++   LG  F  K + P AV+V++  A      AAR   F  ++ G                          C  VKV   +M+   I  N+M  +   A+++P  W+ +QSINI+    +SLP+Y
Sbjct:   10 LRNPLDEAQVR----RAVLALQLFAAKKQEERA-KTPLVEDVEFLSC----------ILTRKLVPAKASLKPIPITLPHAL-YDESAEICLFVKDDDKKRIKELLVKSPVQGVTKVMTVKKLRKNFSRFEDKRALAAAYDMFLADDR------------------VLPYLKGALGTKFFIKKKQPIAVRVSRKDAANAVRLAARRTAF-HVSAGV-------------------------CNNVKVARLDMTPEQIVENIMVAMNNCASLVPKGWNGVQSINIKTSDSVSLPVY 243

[Close]

BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: F0WX21_9STRA (Uncharacterized protein AlNc14C340G10778 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX21_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.080e-18
Identity = 66/238 (27.73%), Postives = 119/238 (50.00%), Query Frame = 1

Query:  361 IAMRKLPERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIYIS 1074
            I  +K+P + + KP  I +PH  R + E  +CL+V+D   + V+K L+  PV GLT V+TL +++K + +F+D+R L+  +DLF+ DD                   I  ++   +GK FI   + P  V++++ +   + + A    TF+ ++ G                          C+ V++ +  MS  +I  N+M G+   A++I  KW+ IQ+I+++    ++LPIY S
Sbjct:   48 IQRKKVPSKASLKPIPIELPHGIRKQSE--MCLLVKDTDKDRVKKILKEDPVEGLTKVMTLKKLRKNFARFEDRRTLVGAYDLFLADDR------------------ILPYLKSPVGKVFIRVKKQPVPVRISR-AKFTQNLRAVEKQTFMFVSCGA-------------------------CMNVRIAHLGMSVDEIVENIMIGMQRCASLIGKKWNGIQAIHLKTNESVALPIYYS 239

[Close]

BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: D0N113_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N113_PHYIT)

HSP 1 Score: 96.3 bits (238), Expect = 1.410e-17
Identity = 85/294 (28.91%), Postives = 133/294 (45.24%), Query Frame = 1

Query:  190 LPNMLDQAQVETAVEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKL-PERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIY 1068
            L N LD+AQV     +AV AL  + AKK     SK  L ED + ++           I  RKL P + + KP  I +PH     E   ICL V+D   + +++ L   PV GLT VLT+ +++K + +F+DKR L A +D+F+ DD                   +  ++   LG  F  K + P +V+V++         AAR   F  ++ G                          C  VKV   +M+   I  NVM  +   A+++P  W+ +QSI+++    ++LP+Y
Sbjct:   10 LRNPLDEAQVR----RAVLALRTFAAKKNEER-SKAPLVEDVDYVSC----------ILTRKLVPAKASLKPIPITLPHAL-YDESAEICLFVKDEDKKRIKEALAKDPVQGLTKVLTVKKLRKNFSRFEDKRALAAAYDMFLADDR------------------VLPYLKGPLGNKFFVKKKQPVSVRVSRKDVANSVRLAARRTAF-HVSAGV-------------------------CCNVKVARLDMTPEQIVDNVMVAMNNCASLVPKGWNGVQSISLKLADSVALPVY 243

[Close]

BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A024T8J5_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8J5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.690e-17
Identity = 84/310 (27.10%), Postives = 130/310 (41.94%), Query Frame = 1

Query:  229 VEKAVAALTEYLAKKPAAHASKTQLFEDANIITXXXXXXXXXAHIAMRKLPERIAHKPRFIRIPHPFRVKEECSICLIVQDRALEAVQKRLETQPVTGLTTVLTLTQVKKEYVQFKDKRELLAQHDLFVCDDSAAQQVXXXXXXXXXXXXLITDFMTEVLGKPFIAKNRLPSAVKVAKLSALPRAVAAARDNTFLRMNRGNSKPXXXXXXXXXXXXXXXXXXXXENCLGVKVGNTNMSAADIAANVMQGVAGAAAVIPGKWDNIQSINIRGLSGMSLPIYISQALDKDLNLRNVTGKQKQLPAPKRKRAK 1158
            V KAV AL ++L KK A   SK  L ++ N I             +++ +P         I++PH  R   E   CL V+D   + ++  L+  PV GL  V+ L ++KK + QFKDKREL A + +F+ DD                   +  ++  +LGK F    + P+ V V     +   +    D T +  + G                          C  VK+ +  M    I AN++QG       +P KW NI+SINI+    ++LPIY +      L + +   K +   A   K+AK
Sbjct:    9 VTKAVVALKQFLKKKKA-QTSKQALVDENNTIQIIFTRVTVPVKESLKAIP---------IKLPHNIRGDGEA--CLFVKDSDKDRIKAHLKADPVAGLAKVMPLKKLKKNFSQFKDKRELKAAYGVFLVDDR------------------VLPYVKSLLGKTFFDAKKQPTTVNVTGKKNISDHIRRVLDGTEMFTSPGP-------------------------CFNVKIAHDGMDTDHIVANIVQGTKNILEHVPKKWKNIKSINIKTSDSVALPIYNALPNSSKLPIGSKKRKAEDSDAQPSKKAK 263

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350439 vs. uniprot
BLAST of jgi.p|Trimin1|350439 vs. uniprot

BLAST of jgi.p|Trimin1|350439 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14


Match Name	E-value	Identity	Description
A0A835YMP6_9STRA	2.730e-312	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CLL4_9STRA	1.080e-68	93.33	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHK8_9STRA	1.050e-67	46.72	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTQ8_9STRA	6.830e-66	63.45	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZDX2_9STRA	5.850e-60	46.95	Protein kinase domain-containing protein n=1 Tax=T...	[more]
A0A835Z9Q3_9STRA	5.200e-55	46.40	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YYH3_9STRA	4.870e-47	42.39	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZE79_9STRA	6.810e-45	50.25	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCV7_9STRA	5.490e-43	76.23	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CGN9_9STRA	1.370e-35	40.67	Reverse transcriptase domain-containing protein n=...	[more]

Pages

BLAST of jgi.p|Trimin1|350439 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CAX2_9STRA	1.230e-215	99.41	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7G5C3_ECTSI	8.490e-31	31.80	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
W7TFQ3_9STRA	4.840e-20	29.72	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A024G4U6_9STRA	1.130e-19	27.84	Uncharacterized protein n=1 Tax=Albugo candida Tax...	[more]
A0A6A4D992_9STRA	2.840e-19	29.25	Uncharacterized protein n=4 Tax=Phytophthora TaxID...	[more]
A0A0P1AN32_PLAHL	1.140e-18	26.96	Low quality protein: ribosomal l1 domain-containin...	[more]
A0A225WZF5_9STRA	1.160e-18	29.93	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]
F0WX21_9STRA	3.080e-18	27.73	Uncharacterized protein AlNc14C340G10778 n=1 Tax=A...	[more]
D0N113_PHYIT	1.410e-17	28.91	Uncharacterized protein n=2 Tax=Phytophthora infes...	[more]
A0A024T8J5_9STRA	1.690e-17	27.10	Uncharacterized protein n=4 Tax=Aphanomyces invada...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_63	contig	Contig_63:150428..160375 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350439\|estExt_Genemark1.C_Ctg_630019
Hectar predicted targeting category	other localisation
TranscriptId	350761
Track	FilteredModels1
ProteinId	350439

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350439	gene_10274	Tribonema minus UTEX_B_3156	gene	Contig_63 150428..160375 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350439	Trimin1\|350439\|estExt_Genemark1.C_Ctg_630019	Tribonema minus UTEX_B_3156	polypeptide	Contig_63 150653..160375 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10274_1	exon_10274_1	Tribonema minus UTEX_B_3156	exon	Contig_63 150428..150830 +
exon_10274_2	exon_10274_2	Tribonema minus UTEX_B_3156	exon	Contig_63 151559..151707 +
exon_10274_3	exon_10274_3	Tribonema minus UTEX_B_3156	exon	Contig_63 152205..152362 +
exon_10274_4	exon_10274_4	Tribonema minus UTEX_B_3156	exon	Contig_63 152466..152514 +
exon_10274_5	exon_10274_5	Tribonema minus UTEX_B_3156	exon	Contig_63 155763..155915 +
exon_10274_6	exon_10274_6	Tribonema minus UTEX_B_3156	exon	Contig_63 156834..156916 +
exon_10274_7	exon_10274_7	Tribonema minus UTEX_B_3156	exon	Contig_63 158084..158281 +
exon_10274_8	exon_10274_8	Tribonema minus UTEX_B_3156	exon	Contig_63 159166..159196 +
exon_10274_9	exon_10274_9	Tribonema minus UTEX_B_3156	exon	Contig_63 160130..160375 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_10274	UTR5_10274	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_63 150428..150652 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10274	CDS_10274	Tribonema minus UTEX_B_3156	CDS	Contig_63 150653..150830 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_63:150428..160375+
coding sequence from alignment at Contig_63:150428..160375+

spliced messenger RNA

>mRNA_10274 ID=mRNA_10274|Name=jgi.p|Trimin1|350439|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1470bp|location=Sequence derived from alignment at Contig_63:150428..160375+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCGCGGGTGCAGGCGGGGGCGCTGGCGCAGCGGCGGGAGCAGGAGGCAC
GCGCTCACAGCCGTGGGGAGCGCCGGCGAACTGCCCTTATGGTGTTTGCT
GGGTGTGGTGGAGGCACGTGAAGGAGCAGAACCCAGTCCCGTGCAACGTC
GTCCCAGGGCCCTGCAAGTACCGCCACTCCGACACCTAGGGGGGCGGGCC
CCTGAGCCTGCGGGAGCGGGGGCCGATGGCGGCAGCGGTGACGAGGGAGG
CAGCGGAGGTGTGGGCCCTTATGCGGAGGAGGCCTCAGGAGCTGCGAGGC
GTGCGGGTGCAGCCGGGGATAGGGAGCGCTGGGCGCTGCGGGCAGCCGGA
GGAGGCGGGCCAGCCGCACGGGGCTGTCGCGTTGGCGGCAGTGTCCATTG
CAGGCCTTACGGCTGAGATGCGCGCCCGGTGGCGCTGCTACCAGGCCATG
GCCGGAAAGTCACTGCTGCCGCTGTCGTCTCTGGCAGACGAAGTCGGCGG
GCTGATTGCTGCGCATGATGGCTACATGGTGAACGTGGTGGAGTCATTGG
GGATGGACGTGAAGTCGGCGTTTCGTCAGTTGGCGCTCGACGTAAGAGGC
CCATTGCTCGGCTACAGGTACAATGATCTGGTGGTTGTGGACCTGCGGTT
GCAGTTCGGTTGGCGGTCTTCACCGGGGTGGTGGAGCCTGGCCGGCGGGG
CGATAGAGTGGTGGTACCGGTGCCGTTGGACGACAGAGCCCGACGCCGCG
TACAGGGAGAGGGCAGCGCTGTGGCACTCTCCTGGCTGCCGCAACTTCTG
GCGCAATGACGGGAAACCCCACGAAGGCGAGAACGTGGTGGTGTGGGAGA
TGGAGAATGAGAGAGATGAATATGAGGGACCGTACCCCACATATGTTATA
TACTGCCCTCAGGTCAATCTTGTGTACGTGGGCAATGTCAAGGCTGGCAG
CAGCACCATCAACGCCGTCCTCAGCTCCAACTTCAAGTGCACCTCCGGTC
TAACGGAGGCGGAGTGCCGCAAGATCAGGGCACGCACCACCTGGCTCGAC
AATGACCTCATCTCTGGCATGCTGTTCTTCAGCGTCGTGCGCGAGCCCAT
TGCGCGCTTCAAGTCGGGGTACATGCAGGCCGTATCGGTGCCTGACACAC
CGCTGTGGGGGACTCCCCTGAAGGAGTACCTAGAGCTCTTTCGGCTCAGT
GGCAGTGACGCCAACGGCAGACAGGTTCCGATGCACTTCGTCGCGTCGCT
AGGGAACCTTGAGGCAGACCTGCAGACGCTATGGTCAACACTCGGCCTGC
CGCCGCTGCGCGACTTCCCGCACGAGCGCGAGGCCGCTCACGATCCCAAC
AAGGCAGCGCTCGACACAAGCCTGTCGCGTGCGGAGCTGCAAGACGTGTG
CGCGCACCTTATGCAGGACTTCATCTGCTTCGGCTATCGGCTGCCGCCGG
AATGCACCGGAGCGCCGTGA

protein sequence of jgi.p|Trimin1|350439

>Trimin1|350439|estExt_Genemark1.C_Ctg_630019 ID=Trimin1|350439|estExt_Genemark1.C_Ctg_630019|Name=jgi.p|Trimin1|350439|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=415bp
MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGA
VALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGY
MVNVVESLGMDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSP
GWWSLAGGAIEWWYRCRWTTEPDAAYRERAALWHSPGCRNFWRNDGKPHE
GENVVVWEMENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLS
SNFKCTSGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYM
QAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMHFVASLGNLEADLQ
TLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFI
CFGYRLPPECTGAP*

mRNA from alignment at Contig_63:150428..160375+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10274 ID=mRNA_10274|Name=jgi.p|Trimin1|350439|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9948bp|location=Sequence derived from alignment at Contig_63:150428..160375+ (Tribonema minus UTEX_B_3156 )
GGCGCGGGTGCAGGCGGGGGCGCTGGCGCAGCGGCGGGAGCAGGAGGCAC
GCGCTCACAGCCGTGGGGAGCGCCGGCGAACTGCCCTTATGGTGTTTGCT
GGGTGTGGTGGAGGCACGTGAAGGAGCAGAACCCAGTCCCGTGCAACGTC
GTCCCAGGGCCCTGCAAGTACCGCCACTCCGACACCTAGGGGGGCGGGCC
CCTGAGCCTGCGGGAGCGGGGGCCGATGGCGGCAGCGGTGACGAGGGAGG
CAGCGGAGGTGTGGGCCCTTATGCGGAGGAGGCCTCAGGAGCTGCGAGGC
GTGCGGGTGCAGCCGGGGATAGGGAGCGCTGGGCGCTGCGGGCAGCCGGA
GGAGGCGGGCCAGCCGCACGGGGCTGTCGCGTTGGCGGCAGTGTCCATTG
CAGGTGAGCCATCAGGTGGTGCGGTTGCGAGGGGTACTGTAACACTCAAT
GCATTAAGCGGCGCTGCAGCCAGGTCAGATCCTGGTGTCTCTGACTCAGG
CGCGGATGCAGGCGGTACTACTAGTGATGACGAGGGTCACCGTGGTGATG
ATGTGTGGCATCAAGCTCAACTTCATGTTGGTGGTACGCTGTGTGGCGGG
CGTGTTCCACGCAGTCATGGCTGTGTTGATGGTACTGATGGTGGTGTGGT
GAGGGGTGACGCGGTGCGCGACGATGCCTCGCATGGGGCTGGCATCACAA
GTGCAGGATTCGCGGTGCGCAACTGTGGTGATGATAAGGGTGGTGATGAT
TCAGAGGTGGTATACGCAGTGCGGTGCGCTGCTTATGGTGATGAAAGTGG
CATAGCATTGGTGCATGCCGAGGTACAAAGGTCGCATGCGAGTGGTTCAG
AGGCCACGCCGATGGACCTCAGTTGCAACGCGCAAGTTGGCGCGTCTGAC
GTTGGTGATGATGGTGCCTCATACGCAGTGACACAGGCCCCTCTCGCGCG
CGATGCAGCTGGTCGGGGTGGTGAGGACGCCGGTGGGAGTGAACAATGTG
ATGGTGGTTTGAGTTGCGCCAGCTGAGTGTGCGCGCGCAGTCCAACTGTC
GTGTTGATGCGAATCAGATGTCGAATGCACCGCCTCATGCAAGTGAGTGC
TCTGCTTCTTCTACTGTGCATAGATGTCCAGGCCTTACGGCTGAGATGCG
CGCCCGGTGGCGCTGCTACCAGGCCATGGCCGGAAAGTCACTGCTGCCGC
TGTCGTCTCTGGCAGACGAAGTCGGCGGGCTGATTGCTGCGCATGATGGC
TACATGGTGAACGTGGTGGAGTCATTGGGGGTAGGCAATGATCACATGGT
GCTTGCGGTTATAGCGTCTTTCTTTGGGCGCGGGGAGGGTTATCCGCGGT
TGCAGGAGCTGCTAGATGTGGTGGCGCACGGTGTGCCGGTGTCTGTCAAA
CGGCAGGCAGATTTTGAGGCAGAATGGACAGTGTCACGTGGAAACTACCC
CCTTGAGCCACGACATGTGCCGGTGTTTGATTGCAAAGTCTTGGAAGACA
TTGCTCTGGGTCGGTGCGTTCATGCATGCTGCCATTGCCCGCATGTACTT
CAGCACACGGTTGCACATCAACCCCGTGTTTGTGGTCGACGAGGGTGCTG
CAAAGTTTCGCGTGGTGCATGACTTGTCTGCTTTGCTACATGGCGAGAGT
GTCAACATTACCACGGTGTTTGAAAAGGCTCCTGTCGTGGAGTGTGGGCA
TATATTTGAGGCGATGCTGTACAGGATATGGTCGTTACGGCAGGCATGGC
CACGCAAACGCATTTTGATTTCCGAAGATGGACGTGAAGTCGGCGTTTCG
TCAGTTGGCGCTCGACGTAAGAGGCCCATTGCTCGGCTACAGGTACAATG
ATCTGGTGGTTGTGGACCTGCGGTTGCAGTTCGGTTGGCGGTCTTCACCG
GGGTGGTGGAGCCTGGCCGGCGGGGCGATAGAGTGGTCGGTTCAACAAGA
GGCGCCGGGCGAAGGACCAATCCCGGGACTCGCGGCCGCTCAATTCGTGT
CACACGTAACGGTGGTGCCAGCGGTGAGCCCGCGGCAGGTGGTACCGGTG
CCGTTGGACGACAGAGCCCGACGCCGCGTACAGGGAGGTGGGCCTTCCGA
CCCAGTATGGGCACGCATGTATGTGGATGACTTGATCATGGTCATGGTAG
AATGGGACCAGGAAGCGCTGCTTGCAGTGACTCGCAGCGCGGCCCACGCC
CATTTTCGGTTGCTTGGCGAGCCGCAGGAGGGGTTGCCGCCTGCGACATC
AAAGAACAAGGTGACAAACTGGGATTCGACGATGACGGTGCTGGGTTGGG
AGGTTGATACTGAAGCGATGGTGATAAGAATGCCGGCAGACAAACGATCT
GCTTTTCAGACGCTGCTGGAATCTTGGCAGCCACACCGGCAGCAGGCTCG
GCGGAAAGAGTTGTGGAGCCTGTTGGGCAAGGTGTCCTGGGCCACATACG
AGGTTCGGGCCGGAAAGTTTCTTGTTTGGCGGTTGCGGGGTCTCCTCAAA
GGAGGTCAATGCACTACGAAATACTCAGGAGGTGCAGCCATAGAGATAGG
CGCAGAGGCACTCAAGGACTTGGTGTTTTGGCGGTGGGCAGTGGGGCCCC
GGGTAGGGACAGCCGCACTGAGCATGCCCATAGCGGCCCTCGTGAAACGC
AAGGCAGATCGCCAGTGGTGGTCTGACGCGAGCTACACGGCGATTGGAGG
GTTTTGCGAGGTCACTGGAGTATGGTGGCGATATGACTTGACGGTAGAGC
AGACAAGTCGTCTCAACAAGGGGACGAAGGTCAAGGTGGGCGACGGTTCG
ATACATATCAACTTGCTTGAGCTGGTGGGGATGGTGATGACGGCTTGGGT
GATGGTGGTGGTGGAAAACCATGCACCCCCTGTCCCAGGGGGGGTGGTGC
TGCTGCGAGGGGACAACACCTCTGCAGTGGGTTGGGTTCAAAAAGGTGGG
GGGGCCGCAGACCCTAGGATTGGAGGGTTGTTGCGCTTGTTGGGTGCAGT
CAAACTGATTGGAGGGTGGAGTTTGAATGCGCGCCACGTGCCAGGCAAAC
TCAATGTGACTGCTGACGGTATTTCCCGGTGGGATACTGTGCGCGTGCAG
GCGGAGTTACAGGCACGGTTCCCAGATGTAAACTGGCGACAAGCAGGGCT
GAGCCAACGCGAGATGCACATTATTACCGCTGCCTTAGCCAGGAGCTGGC
CAGAGACAGCGTGGGAGCAACATCTATGGGCCAGTATAGGACGGCCTTGA
CTCAGTGGTTGGAGTTCAGGCGGGCGGCAGGGTTGCCAGATTTTATAGTT
GTGTCGCTCTGCGACGCGGAAAAGGCCGCTCAAGTAGGGGATTTCATGGC
ACAGCTGTTTCACCAGCGTGAAAATCGAGCCAACACGATACGGTCGAAGG
TGTCAGCACTCAACTACTTCCACAAGATGTGGGGGGGGGGTGAGTTGCCG
GTGAAGCATTTTCATGTGAGAGCAGTGTCGGAGGGCATTGCACGACGGCA
GAGTATCAGTGGCACAAATGTGCGCCCCTTCCGTCGGGGCCTGACGTGGC
ACCAGATATGTCAGGGTAGGCAGATGAGTCAGTGCGCACGGTTGTGGGCA
ACGGCTCCGGGGGGTAGGTTGGTATGGTATGGCCTAGCGCTTTCATACCT
GTGGATGCTGCGAGCCTCTGAAATATGGGGGGAGGATGCCACAGGGGCGG
TGCGGCCGGATTACGGTTTGACCAGGGGTAGCTTAACATTTAGGAAAGGG
GGGGCTCCCCTGCCGCGAGAGAGGTACAGGGAAGCCGAAGTGGTGGTGGT
ACGTATGGACTTGTGGTGGTGGTACACTTCAAAGCGTCCAAAGGGGATCA
GAAAAGGGTGGGGGCAGGATAGCAAGGTCAGGGGCATGTGCGCAGGTCAT
GATCGAATTATTGTGCCTTTTTCCTGGTTTATCAGACACGGCGCCTCTGA
TGGCCTACGCGCGGGGGGCAGCATTCAGTGTGGTCAGGCGTCGAGAGTCT
GACGCAACACGCATTGTGCGACAGATGGTGTCAATTGTGGGGGGTAATGG
CCCACCTGCAGAGTATGCTCTCCATTCAGGGCGAGTGGGGGGGGTCACCG
CGATGATGATAGCAGGCAGGTCTGATACTGAAAGCATGAAAGCGGGGAGG
TGGAAGTCGGCAGTGTTCAGAACCTACATCAGGCTTTCGCCGGAGATGGA
GAATGCCTCCTCCGCACTCGTGCCGGGTAGTTGACCATAATGGTGGCAGC
TTGAAGCCTCAGCGCACTAGACGTGTCCGCGCAGGGTGGCGTGGCAGTGC
GCAACGAGATGATGTCTAATCGATTGTTTACATTGTAACTTTGAAAGTCC
AAAGCTTGTCTGGTCAACTGTTGCCAGTGTGCACATGTCATTGCAGTGCC
TCTGAGTCACACGACTAAGGTCAATTGACGCGCTGGTGTGTGCATCAAAC
ATTCAATTTGGGCCCCGGGGTTGCCTTTGTGATGATGAACGAGATGTGTC
ACATTGTCAAGTGGTTGCAACAGGTGGTGGCTGGTGACAGTTCCCCCCCA
CACCTCCCCCGCCCACCCTGCCATGGGTGGTCGGGCCCCTGCGCGACGGG
GGCGGGTGGGTGCGGGGGGCGGTGGTGGGGGGGTCCCCTGGGCGTTCGGC
CCGTTGGAGGCTTGGGCTGCTGAGCACTGCAGCCCGGGGGTCGATTCTCC
ACGGGACCCCCCACACACCGGTCACATGGCAATACATTCTGGCAACCAAA
AATGTCACATGTGTGTTTCCTGTTTTTTTGTCTCTGCCGGGAAGCAAGAG
GAAAAATGGCTATTCTGCGTCCCAATTCGCCGAAGGTGAACCAAGGTGAA
AAGAAATGACTGTGCGGCAGTCTGTGCCACATGCGGCGAAGCAGATGATG
GCAGTACGCCGTTGTTGTTTCCGCTGGGCCGCTATTGTCGCCCTGACGGT
CGTCGCCACACCTTCATCAAGAGCAACTTTGCATGCGGCAGCTTCGGAGC
CCGACAACAACAACATTAGAGTTTCTGCGCTGAAGGTGGCTTTGGGGGCG
GCGAGCCCACGAGCAGTGACAGCAGACGCAAAGCATCACACCAAGCTGAG
ACAAATTGCCCATTCAACGGCCAAGGCCTCATCGGAACATGCAGGCATCA
GGACTATTTCAGGCTCATCTGTCGAGCGGCGGCGTGCGCACTCCTCGGAG
GTCAGCTTAAGCGTGGAATTGACGATCAGCGCAACAGCTGGCAATACCGC
CAGTTCACCTTATGACACAAGGTTTGACTGGTATGGTCACAACAGTTCTG
CGCCGGTCGTCGACCATCTCCTGGACCCGTATCAGAGGGCAGCGCTGTGG
CACTCTCCTGGCTGCCGCAACTTCTGGCGCAATGACGGGAAACCCCACGA
AGGCGAGAACGTGGTGGTGTGGGAGATGGAGAATGAGAGAGATGAATATG
AGGGACCGTACCCCACATATGTTATATACTGCCCTCAGGTGCGTTAACGA
CCACTATGAAAATCAAACAAATTCGACGGACAACAACAAGGATCCTGATA
TGATCCAGAAGCACATTGCAAGTATCAGTTCAACATCTGATGATTCAGTT
ACATGAATCAAATGTTACAGTACTAGACAGAGACTGACTGGCTTAACCCG
AAATCTTCATCGCATTCAAATTCGAGTTTCATACAGGCATATTTCACATT
CAGTGAGTCATCGGATCATTGACGCTCAAATCAATCCTCCATAGAAACAC
CATACCGTGATGACGGTCATTGAGTCGCCCCTTCCAGACACGCACATTGT
ACTCAGGCAGCATGGCATACATGCGTTGTGGCATACTTTGAAGCACACTA
GGTCCTGCAGCACTGATACTACAGTCGTATAATGTGCTCCACCGGATGCA
TTGCCGTGGTGAGCTTACATGTATATTTGTGAGGCATTTCGCATTCAAGT
TTTGTGCTTGAGTCACTCACTGGCAGTTCATATCCGATATCACGGTGATA
TGCAAACTGAGCCACTACATTGCATGGACACCGATCAATGGCACAAGATC
AGGGACGAGGGCAAAGCGGGTGCTCAAGCTGTCATATTGCATCTTACCCT
AACTTAACAAACCAAAAGGTTTGAAAGGCCGCCTTGTTCAGATCGCTTCA
TTGACAAGCCGGCATATGATAACGGACTTTGTCTGGGAGCAGCAGCGCAC
CGTATGGTATGTGGTGTCAGCGCGGCGCTTGAATTGATCTGCTGTGATGA
GTACAAATCGTGTCAAGTGATGTTAGCACAGCCGACCTGGTGTCGGACAT
GTGATGCATCTCAGACTGATTGAAAGTGTGCACATCAAATGCCAGAGAGA
CGAAGTCTTGCTCAGTGATGACCCTGCATTGGTGGCGCCGTCCTGTCCCT
TTGCAGGTCAATCTTGTGTACGTGGGCAATGTCAAGGCTGGCAGCAGCAC
CATCAACGCCGTCCTCAGCTCCAACTTCAAGTGCACCTCGTACAATCACC
ACTTGTGGGCACCGCCAGAGACCAGGGCAAAATTTTGCAGGTACTACATG
ACCGCCGAGCCAGACTGTCACAGTGTCAAATGCATGTGGAGGTTCGTTCA
TGTGTGCATTCATTCACTACACCACTAGACTAAGTCTACTACTGTAACAG
CACTACTGACGCTGAACGCGATACTGCTAGCAGTACTGCTAGCACATGCA
CGATATGAAATTACTCGTAGACTAGACTCTGACTCAGAATTCACTCATGA
AAGCCTGAGGCTGACTGATGGACACGCATTAGACCATGGTGCTGCCCAGT
GGTACCAATGGTGAGAGCTTGCAGCTGAAGGTTGTGTCAGTACCGCTGTC
CCAGCATGTAGCGGCATCACCCTGAAGTGCAGCGTGAAAGAACGCCTTGC
TGACTAGCTCATACACTTGGCAGGCTCTGAGAGTAGAACTACTCTGTCCT
AGGAGCTGCCGTGTCAATTCTATCCTCTGAGTGGCAATTTGGTAGCCATC
CAGCAATTTGGTAGATATCCAGCCAGTCAGTCCCCGGAACGTGCAGCAAC
TTAATGGTTGTTTGCACCAACAGCTGCATCATGCCACCGAGCTGCGTCAT
GCCACCAAAGCTGATTGTGTCAGTAACTGTCTGATCCTGCCGAACCGGCA
ATGCTGATGGACTGTGTGGATCTCCCCCCGCTAGTTGCTGCATAGGATAT
GAACCCTAGGACTACGTCATGTGGTACCCTGGCACGTCAGAACGGGGTGG
CCGCCCTCAGGCTGCCATGTGCGCATAAGCATTTTAGCTCAGGGGTAAAG
CGGCAGCCAGAGTCACCACAAGCAGAGCATCTGAAATCATCAGTCTGAAT
GAGCAACGCATGAATGGGAGGGCTGCAGCGCAGCACTCGTACGCAGTGCA
ATGCATACAGGCGTGTGGCTTACTGACAGTGTTGAACTATGCATGAGTTG
AAGGACTGCAGCGCAGCACCGTGACTCTTACGCAGTGCAACTGCCACACA
GGCATGGTGCTCACTGACAGTGTCAGGCTGAATGATTCCCATGGTACTAG
CTGCTAATCATTGTCATCATGGTATCATTACCTTCACTGACACATTGTAT
TCTACCATTGTGACTGCTCACCTAATGGTCGTTAGCATCTGCTGGTGGTT
GTGCAGCGGTCTAACGGAGGCGGAGTGCCGCAAGATCAGGGCACGCACCA
CCTGGCTCGACAATGACCTCATCTCTGGCATGCTGTTCTTCAGCGTCGTG
CGCGAGCCCATTGCGCGCTTCAAGTCGGGGTACATGCAGGCCGTATCGGT
GCCTGACACACCGCTGTGGGGGACTCCCCTGAAGGAGTACCTAGAGCTCT
TTCGGTGAGTGACTACTGGTTATCATCATGTAATCAATGGTCCAAGTGTT
GATCGACTGCATGGGCTGCAGCACTTGTTTACGGGTGGCTGGGTTTCTAG
GGTGGCAGCGCTCAGGAAGATCAGGTCGCGTGGTTCAGAGCGGGGTTTCG
TAAATCATTGACAAATGCATGAATCAGAACCATGTGCCGGTGGGCTTAGG
TTGACGACTCAGTGCATGCAATGGTATGGCGGCATTAGACGCAGGATTGA
CGCCTACTAGCGTAGCGCATTTGACGGCCTCGGTGAAGCAGATTGTGATT
TGGCATGTCTGATAGCTGTGCCTACTGTAGGCCTGACACACGCCGACACA
ACTGTCATCAAGACCTACAATGTCGGACAACACAGTGTGGCGAGTGTTCT
GTAGATCAAGGGGAAAATAGTTCATCGGGTGTTCATGATGTCGGGAAAAG
TGCACATTGAATGCGTTCAGATGCGGACGCCCTCCATGGAGCCACATGCA
CGCTGGAGAGCAGGCACAGCGCTTGCTGACGTCGGACTTCATGCGCCTCT
GCCTGCGGTAGATGCGCTGACGATCAGTTTGCTCTGCACGTGGCAGCCCG
ACATTTGATTTGGTCTGTTCAGGCACGCAGTTGCTATCTGCGCTTCATGC
GCTAGTCCGTTGGCTGGCACAGAGAGGGTACTTGCTCATCCGCAGTGGCT
GCTAGCAGCTTGTCTCATGCCACTTAGCACGTGTTGAGTAACTTAAAACT
CGTTATCCTTCAGCCCCCCATTGCCTTCCAATGATTACAACCGACTCTGT
CAAGATGTGCTCACGCGTGCAATCTTTCATCCTGCATGTGTGCCAGGAAC
TCCTCTGTCAATGAGCACACTTCTACTCAGGCGCGCAGGCTCAGTGGCAG
TGACGCCAACGGCAGACAGGTGAATTGTGTAATTTTTGCTCCGCATTACA
TTACGGCCTGATTTTCAGGGCAACTGCTGCAAATGGTGTCGCATTTACCT
CTGCATCAGCTGTGGAACCTCGGAGTCAGCAACATTTTCTTAACCAAAGT
TGGCGATGATGATTTACTTGGAGCGCATGGTATGATGAATGGCATTTCTG
CAGGTTCGTCCTTGAGTATCTGCGGTGCCCATATAAAACGTGCGGCCTGC
CAGTGAGTGGTGAAAGGTGCTTTGGACCCCACCAGCCCCAGCCATTTCTT
TGTATGGCTTCTCCAGCAACATCTGCAGAAAACTACAGATGGAGGCAGCT
GAAGGAGTTGCTGCCATTCCGCATTATGATAGTGGGTTGCGCGTGGGTGT
GAAGCCCCTGACCAAGCCTCGAAGAGTTGCACTGAAAGTGCTGTGCTGGG
TGCTCATTCAGACCTGACTTGAACAAGGTACAACCTGCTGCTCAAGGAGC
AATATGCACATAAGAACAACGCAGTGGAGCACACATGCATGAAACCTGCA
ATGGCAGAATTGGCACGAGGCGCCATGCAAGCAGACCTTGTTAAATCTTA
GTGACCCGTGCGATATGTATATATATACATACATTTGAGCATGGAAAGGT
ATGACATGCACACACTGCTGAATTCCTCAGTGGGAATGATGCAGCATGTG
TCTGAGGGGCATGAGATTGTGTGTCTGCTGCTGGTTTGTGCCATCGGTCG
TGGGTTCACTGTGTGCACTGTGGTGCATGAGATGCTATTGAACCAGAGCC
GACCCCAGTCAGTGCCTCGTTCGTTTACACAACCATCGCTGCCCCCCTCC
CCCCCCCCCCCCCCCCCATTGTCGTTGAATGCTCTCATTGCGCTCGTGCT
CAGCAAATCTACACACGCCTTGCTGCCTTGCCACAACTTGCTCGCTGCGC
AGGTTCCGATGCACTTCGTCGCGTCGCTAGGGAACCTTGAGGCAGACCTG
CAGACGCTATGGTCAACACTCGGCCTGCCGCCGCTGCGCGACTTCCCGCA
CGAGCGCGAGGCCGCTCACGATCCCAACAAGGCAGCGCTCGACACAAGCC
TGTCGCGTGCGGAGCTGCAAGACGTGTGCGCGCACCTTATGCAGGACTTC
ATCTGCTTCGGCTATCGGCTGCCGCCGGAATGCACCGGAGCGCCGTGA

Coding sequence (CDS) from alignment at Contig_63:150428..160375+

>mRNA_10274 ID=mRNA_10274|Name=jgi.p|Trimin1|350439|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1245bp|location=Sequence derived from alignment at Contig_63:150428..160375+ (Tribonema minus UTEX_B_3156 )
ATGGCGGCAGCGGTGACGAGGGAGGCAGCGGAGGTGTGGGCCCTTATGCG
GAGGAGGCCTCAGGAGCTGCGAGGCGTGCGGGTGCAGCCGGGGATAGGGA
GCGCTGGGCGCTGCGGGCAGCCGGAGGAGGCGGGCCAGCCGCACGGGGCT
GTCGCGTTGGCGGCAGTGTCCATTGCAGGCCTTACGGCTGAGATGCGCGC
CCGGTGGCGCTGCTACCAGGCCATGGCCGGAAAGTCACTGCTGCCGCTGT
CGTCTCTGGCAGACGAAGTCGGCGGGCTGATTGCTGCGCATGATGGCTAC
ATGGTGAACGTGGTGGAGTCATTGGGGATGGACGTGAAGTCGGCGTTTCG
TCAGTTGGCGCTCGACGTAAGAGGCCCATTGCTCGGCTACAGGTACAATG
ATCTGGTGGTTGTGGACCTGCGGTTGCAGTTCGGTTGGCGGTCTTCACCG
GGGTGGTGGAGCCTGGCCGGCGGGGCGATAGAGTGGTGGTACCGGTGCCG
TTGGACGACAGAGCCCGACGCCGCGTACAGGGAGAGGGCAGCGCTGTGGC
ACTCTCCTGGCTGCCGCAACTTCTGGCGCAATGACGGGAAACCCCACGAA
GGCGAGAACGTGGTGGTGTGGGAGATGGAGAATGAGAGAGATGAATATGA
GGGACCGTACCCCACATATGTTATATACTGCCCTCAGGTCAATCTTGTGT
ACGTGGGCAATGTCAAGGCTGGCAGCAGCACCATCAACGCCGTCCTCAGC
TCCAACTTCAAGTGCACCTCCGGTCTAACGGAGGCGGAGTGCCGCAAGAT
CAGGGCACGCACCACCTGGCTCGACAATGACCTCATCTCTGGCATGCTGT
TCTTCAGCGTCGTGCGCGAGCCCATTGCGCGCTTCAAGTCGGGGTACATG
CAGGCCGTATCGGTGCCTGACACACCGCTGTGGGGGACTCCCCTGAAGGA
GTACCTAGAGCTCTTTCGGCTCAGTGGCAGTGACGCCAACGGCAGACAGG
TTCCGATGCACTTCGTCGCGTCGCTAGGGAACCTTGAGGCAGACCTGCAG
ACGCTATGGTCAACACTCGGCCTGCCGCCGCTGCGCGACTTCCCGCACGA
GCGCGAGGCCGCTCACGATCCCAACAAGGCAGCGCTCGACACAAGCCTGT
CGCGTGCGGAGCTGCAAGACGTGTGCGCGCACCTTATGCAGGACTTCATC
TGCTTCGGCTATCGGCTGCCGCCGGAATGCACCGGAGCGCCGTGA