Trimin1|350439|estExt_Genemark1.C_Ctg_630019 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350439
Unique NameTrimin1|350439|estExt_Genemark1.C_Ctg_630019
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length415
Homology
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835YMP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP6_9STRA)

HSP 1 Score: 852 bits (2200), Expect = 1.570e-312
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0
Query:    1 MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAALWHSPGCRNFWRNDGKPHEGENVVVWEMENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTSGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTGAP 414
            MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAALWHSPGCRNFWRNDGKPHEGENVVVWEMENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTSGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTGAP
Sbjct:    1 MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAALWHSPGCRNFWRNDGKPHEGENVVVWEMENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTSGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTGAP 414          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A836CHK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHK8_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.280e-68
Identity = 128/274 (46.72%), Postives = 169/274 (61.68%), Query Frame = 0
Query:  178 ERAALWHSPGCRNFWRNDGKP-HEGENVVVWE-----MENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCT-------------------SGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELF--------------RLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTG 412
            +RAAL+HS  CRNFWR+D +P ++ E ++VWE     M  +      P  T V++CP++NLVYV NVKAGS+T+  +LS  + CT                    GL+  EC+  R+RT WLD+ ++SG  FFS+VREPIARF+SGY QAV++ D  L    + EY+E +              RLSG DA+ RQVPMHF+ASL NLE D+  LW+ LGL PL  FP  R A  D +KAALDT L+  +++ +CAHL QDF+CFGY LP  C G
Sbjct:   33 QRAALFHSRECRNFWRHDTRPEYDQEPMLVWENRIYAMMPKDKRPASPPLTDVVWCPKLNLVYVDNVKAGSTTMMGILSREYNCTWHTHTRWPPAQARLARAQCKGLSHDECQDRRSRTDWLDDAVLSGATFFSIVREPIARFQSGYKQAVTM-DAKLANLTIAEYVEEYKLKYLNEHTLTQSRRLSGWDAHNRQVPMHFIASLENLEHDMAALWARLGLAPLAAFPRMRAAEMDASKAALDTRLTPVQVRVLCAHLAQDFVCFGYALPEACRG 305          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835YTQ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTQ8_9STRA)

HSP 1 Score: 219 bits (558), Expect = 9.890e-66
Identity = 125/197 (63.45%), Postives = 131/197 (66.50%), Query Frame = 0
Query:    1 MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYR---------------YNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAAL 182
            MAAAVTREAAEVW L RRRPQELRGVRV+PGIGSAGRCGQPEEAGQPHGAVALAAVSI                            ADEVGGLIAAHDG MV VVESLG+        +     G   GY                YNDLVVVDLRLQFGWRSSPGWWSLAGGAIE WYRCRWTTEPDAAYRE++ +
Sbjct:    1 MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEEAGQPHGAVALAAVSI----------------------------ADEVGGLIAAHDGNMVKVVESLGVGNDHMVLAVIASFFGRGEGYPRLQELLDVVAHGVPVYNDLVVVDLRLQFGWRSSPGWWSLAGGAIERWYRCRWTTEPDAAYREKSCI 169          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835ZDX2_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX2_9STRA)

HSP 1 Score: 223 bits (567), Expect = 7.470e-61
Identity = 131/279 (46.95%), Postives = 161/279 (57.71%), Query Frame = 0
Query:  172 PDAAYRERAALWHSPGCRNFWRNDGKPHEGENVVVWE-MENERDEYE------GPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTS------------------GLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAV-SVPDTPLWGTPLKEYLELFR--------------LSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 410
            P AA +  AA         F+  DG   +   +V WE +  E + Y+      G   TY+IYC +  L YV N KAGSST  +VL+ +F CTS                  GL+  +C + RART WLD+  ISGM FFSVVREPIARFKSGY QAV S P+  L G  + EYL  +R              LSG DA GRQVPMHF+ASL NLE DL  LW  LGLPP+  +PH R    DPNKA LDT+L+  +++++C HLMQDF+CFGY LP EC
Sbjct:  769 PTAAPKSSAATAAQDMLSTFYLPDGAADDEAALVAWEGVHAELEVYDRDHMPLGMEATYIIYCREQMLTYVLNQKAGSSTTASVLNEHFHCTSTQHDWVPEHIKQRRCYDSGLSSEDCERRRARTDWLDDGSISGMNFFSVVREPIARFKSGYQQAVTSTPE--LQGWTISEYLAEYRKFPVNEHTHTQARNLSGRDALGRQVPMHFIASLENLEHDLTLLWDELGLPPMAHYPHARSKEDDPNKAVLDTTLTADQMRELCDHLMQDFVCFGYTLPEEC 1045          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835Z9Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q3_9STRA)

HSP 1 Score: 192 bits (489), Expect = 8.220e-56
Identity = 103/222 (46.40%), Postives = 136/222 (61.26%), Query Frame = 0
Query:  220 YPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTS-----------------GLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELF--------------RLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 410
            Y T ++YCP+  LVYV NVKAGSSTI+A+L  +F C S                 GL+   C  +RA+T WL  D ++G  FFS VREP+ RF SGY QAV+     +    + EY++ +              RLSG DA+G+QVPMHF+ASL  L  DL  L + LGLPP+ +FP  R AA DP+KAALDT+L+  +++ +C HLMQD++CFGY LP EC
Sbjct:    2 YSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAAT-VEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMEC 222          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835YYH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYH3_9STRA)

HSP 1 Score: 172 bits (436), Expect = 9.190e-48
Identity = 103/243 (42.39%), Postives = 142/243 (58.44%), Query Frame = 0
Query:  204 VVVWEMENERDEYEGPYP--TYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCT---------SGLTEAEC-----RKIRARTTWLDNDLISG---MLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELF--------------RLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAA---LDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 410
            ++VWE   +      PY   T ++ C +  LVY+ NVKAGS+ + AVL + F CT           L+ A+C     RK RA T W +++ ++G   MLFFSVVREPI RF SG+ QA+ + D  L    +  ++  +              RLSG D  G QVPMHF+AS+ NLE D+  L++  GLPP+ +FP  R AA DP KA+   L T+L+ A+++ +CAHLMQDF+CFGY LP EC
Sbjct:    1 MLVWENHGQ------PYTFGTDMVVCKKAGLVYIDNVKAGSTAVQAVLGTRFGCTWTRHNNWAPPELSRAKCWGLKPRKCRATTQWFEDETVTGDPGMLFFSVVREPIDRFVSGFKQAL-LQDKALRNETISSFIRSYQYASMNEHTQTQARRLSGRDKAGNQVPMHFIASMENLEHDVAALFAHRGLPPVDEFPRMRAAARDPFKASRAELGTALTTADVRLLCAHLMQDFVCFGYLLPQEC 236          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835ZE79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE79_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.250e-45
Identity = 101/201 (50.25%), Postives = 117/201 (58.21%), Query Frame = 0
Query:  258 GLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMH----------FVASL--GNLEADLQTLWSTLGLPPL--------------------------------RDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPECTGAP 414
            GLTEAECRKIRART WLD+DL+SGMLFFSVVREPIARFKSGY++AVS PD  L G PLKEYLE +R    D   R +  +          + ASL   +   D       L LPP                                 +D+ H REAA DP K  LDTS++ AELQ+VCAHLMQDF+CFGY LPPECT +P
Sbjct:    7 GLTEAECRKIRARTDWLDDDLMSGMLFFSVVREPIARFKSGYLEAVSAPDNRLSGMPLKEYLEHYRCRRCDICRRLLLFYHAPQAAAVAPYAASLLLRHASPDAAAAPPALPLPPRLPQRLRRWPVGAINEHTHTQARSLSGRDANNKQDYTHAREAARDPIKTTLDTSMTPAELQEVCAHLMQDFVCFGYPLPPECTESP 207          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A836CGN9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.860e-36
Identity = 85/209 (40.67%), Postives = 117/209 (55.98%), Query Frame = 0
Query:  236 GNVKAGSSTINAVLSSNFKCT-------------------SGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSV-PDTPLWGTPLKEYLELFRLSG--------------SDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 410
            G   AGS+TI  +L  ++ CT                    G    EC + R+RT WLD+ ++   +FFSVVREP++RF SGY QAV+   D   W   + +Y+E +R+                 DA+GRQ+PMHF+ASL NLE DL  LW+ LG+PP+ +F   R A  D  K  L+T L+  +L+++C HL QDF+CFGY LP EC
Sbjct: 1285 GGGGAGSTTIMGILERDYNCTWHTHMEWPEEQARIARQRCVGAMPEECFQKRSRTDWLDDSVLERAVFFSVVREPVSRFVSGYKQAVAAYEDVGNW--TMTQYMEAYRVRSVNEHTLTQTRRIGVDDAHGRQIPMHFIASLENLEEDLALLWAHLGVPPIENFLRMRSAQTDSRKYHLETRLTADQLRELCWHLGQDFLCFGYPLPSEC 1491          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A836CCV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.060e-34
Identity = 82/110 (74.55%), Postives = 86/110 (78.18%), Query Frame = 0
Query:    1 MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGM 110
            MAAAVTR AAEVW L RRRPQELRGV VQPGIG+AG  GQPEE  +           + GL AEMRARWRCYQAMAGKSLLPLSSLADEVGGLI AHDG MV VVESLG+
Sbjct:  217 MAAAVTRVAAEVWGLTRRRPQELRGVWVQPGIGNAGHRGQPEEESRS---------GVPGLAAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIVAHDGNMVKVVESLGV 317          
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Match: A0A835YZC0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC0_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.210e-24
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:  110 MDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAI 160
            MDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAI
Sbjct:  162 MDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAI 212          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350439 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A835YMP6_9STRA1.570e-312100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHK8_9STRA1.280e-6846.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTQ8_9STRA9.890e-6663.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDX2_9STRA7.470e-6146.95Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A835Z9Q3_9STRA8.220e-5646.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYH3_9STRA9.190e-4842.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE79_9STRA1.250e-4550.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGN9_9STRA2.860e-3640.67Reverse transcriptase domain-containing protein n=... [more]
A0A836CCV7_9STRA1.060e-3474.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZC0_9STRA2.210e-24100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_63contigContig_63:150653..160375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350439mRNA_10274Tribonema minus UTEX_B_3156 mRNAContig_63 150428..160375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350439|estExt_Genemark1.C_Ctg_630019 ID=Trimin1|350439|estExt_Genemark1.C_Ctg_630019|Name=jgi.p|Trimin1|350439|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=415bp
MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGA
VALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGY
MVNVVESLGMDVKSAFRQLALDVRGPLLGYRYNDLVVVDLRLQFGWRSSP
GWWSLAGGAIEWWYRCRWTTEPDAAYRERAALWHSPGCRNFWRNDGKPHE
GENVVVWEMENERDEYEGPYPTYVIYCPQVNLVYVGNVKAGSSTINAVLS
SNFKCTSGLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYM
QAVSVPDTPLWGTPLKEYLELFRLSGSDANGRQVPMHFVASLGNLEADLQ
TLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFI
CFGYRLPPECTGAP*
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