Trimin1|158622|e_gw1.6.193.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|158622
Unique NameTrimin1|158622|e_gw1.6.193.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length183
Homology
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BLAST of jgi.p|Trimin1|158622 vs. uniprot
Match: A0A835YPC8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPC8_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.210e-20
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:    1 MLELRHEIPCPEDGCDGVFTTNQSMQTHVGNVHKGRKDF 39
            MLELRHEIPCPEDGCDGVFTTNQSMQTHVGNVHKGRKDF
Sbjct:    1 MLELRHEIPCPEDGCDGVFTTNQSMQTHVGNVHKGRKDF 39
[Close]
BLAST of jgi.p|Trimin1|158622 vs. uniprot
Match: A0A835Z6Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 4.810e-14
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 
Query:    8 IPCPEDGCDGVFTTNQSMQTHVGNVHKGRKDF 39
            IPCPEDGCDGVFTTNQSMQTHVGNVHKGRKDF
Sbjct:   37 IPCPEDGCDGVFTTNQSMQTHVGNVHKGRKDF 68
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158622 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YPC8_9STRA2.210e-20100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z6Z8_9STRA4.810e-14100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 132..158
e-value: 3.9
score: 16.5
coord: 101..126
e-value: 0.019
score: 24.1
coord: 8..33
e-value: 0.055
score: 22.6
coord: 163..183
e-value: 120.0
score: 3.8
coord: 39..64
e-value: 0.0087
score: 25.3
coord: 70..95
e-value: 0.016
score: 24.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 134..158
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 103..126
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 72..96
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 10..33
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 41..65
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 8..38
score: 9.078375
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 70..100
score: 11.676262
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 101..131
score: 11.219034
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 132..162
score: 8.953676
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 39..69
score: 11.759394
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 128..162
e-value: 2.3E-6
score: 29.2
coord: 67..95
e-value: 1.1E-7
score: 33.4
coord: 29..66
e-value: 7.0E-10
score: 40.4
coord: 96..127
e-value: 2.0E-8
score: 35.8
NoneNo IPR availablePANTHERPTHR46179ZINC FINGER PROTEINcoord: 7..109
coord: 70..183
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 81..139
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 18..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:812081..812629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158622mRNA_2133Tribonema minus UTEX_B_3156 mRNAContig_6 812081..812629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|158622|e_gw1.6.193.1 ID=Trimin1|158622|e_gw1.6.193.1|Name=jgi.p|Trimin1|158622|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=183bp
MLELRHEIPCPEDGCDGVFTTNQSMQTHVGNVHKGRKDFACTEEGCQKKF
SKKHHMQRHIDTVHHGRKDFACTEEGCQKKFSKKHHMQQHVNTVHHGRKD
FACTKEGCQQMFTAASSMQQHIETVHNGRRDFTCTEEGCQQKFSFKHHMQ
QHIDTVYHGRRDFACTAEGCQQKFPQIHHMKNH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf