mRNA_6999 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A835YQ38_9STRA (Putative cystathione gamma lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ38_9STRA) HSP 1 Score: 319 bits (818), Expect = 2.070e-110 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1 Query: 1 MTNRLPLLPICIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPALR 477 MTNRLPLLPICIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPALR Sbjct: 1 MTNRLPLLPICIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPALR 159
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A836CFW8_9STRA (Cystathionine gamma-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW8_9STRA) HSP 1 Score: 256 bits (654), Expect = 4.610e-82 Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 1 Query: 40 ARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 471 A QLVH GI+PDEKTGAILTP +Q TTYVQESVDKYLAKG+ YSR ANPTV+ LEA+IAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMF+DL ITFSFVDFRDP IVEAAI+PNTKLIFSETPA Sbjct: 18 ATQLVHAGIDPDEKTGAILTPIYQATTYVQESVDKYLAKGFSYSRTANPTVKALEAKIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFSDLGITFSFVDFRDPAIVEAAIRPNTKLIFSETPA 161
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: D8LJS6_ECTSI (Cystathionine gamma-lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJS6_ECTSI) HSP 1 Score: 218 bits (555), Expect = 3.780e-67 Identity = 108/143 (75.52%), Postives = 127/143 (88.81%), Query Frame = 1 Query: 46 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAG-ACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 471 +LVH GINPD++TGAILTP Q+TT++Q+SV+KYL +G+ YSR ANPTV LEA++A LE AG ACCV TGMAATVTVM+A LKAGDHCVIT+CSYGGTNRAARVMF+DL +TFSFVDFRDP +V+AAI+PNTKLIFSETPA Sbjct: 19 KLVHQGINPDKETGAILTPIVQSTTFIQDSVEKYLDRGFSYSRTANPTVAALEAKVAGLEGAAGGACCVATGMAATVTVMSAFLKAGDHCVITECSYGGTNRAARVMFSDLGVTFSFVDFRDPEVVKAAIRPNTKLIFSETPA 161
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A7S0TAJ6_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAJ6_9STRA) HSP 1 Score: 204 bits (520), Expect = 5.970e-62 Identity = 101/142 (71.13%), Postives = 113/142 (79.58%), Query Frame = 1 Query: 46 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 471 QLVH G+ PDE TGAILTP +Q TT+VQES+D+Y+AKGY YSR NPTV VLE +IA LE AGACC TGMAATVTVM+A L GDHCV+TDCSYGGTNR AR F + I FSFVDFRDP V AAI+P TKL+FSETPA Sbjct: 15 QLVHSGVAPDEATGAILTPIYQATTFVQESIDQYMAKGYSYSRTTNPTVRVLEQKIADLEKAAGACCFSTGMAATVTVMSAFLSQGDHCVLTDCSYGGTNRVARKQFMNYGIEFSFVDFRDPANVAAAIKPETKLVFSETPA 156
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A0L0FZV2_9EUKA (Cystathionine gamma-synthase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FZV2_9EUKA) HSP 1 Score: 201 bits (510), Expect = 2.250e-60 Identity = 101/147 (68.71%), Postives = 116/147 (78.91%), Query Frame = 1 Query: 31 CIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 471 C + QLVH G+NPD TGAILTP Q TT+VQES+D YL+KGY YSR ANPTV LE +IA++E+ AGA C TGMAATVTVMTA ++AGDHCVIT+CSYGGTNR AR MF L + FSFVDF D +E AI+PNTKLIFSETPA Sbjct: 15 CGQSTQLVHAGVNPDPTTGAILTPIVQATTFVQESIDLYLSKGYSYSRTANPTVRALENKIAEIEHAAGATCFSTGMAATVTVMTAFMRAGDHCVITNCSYGGTNRVARKMFMGLGMEFSFVDFTDLAEIEGAIKPNTKLIFSETPA 161
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A7S4E341_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E341_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.800e-60 Identity = 97/141 (68.79%), Postives = 112/141 (79.43%), Query Frame = 1 Query: 49 LVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 471 LVH G+ PD TG ILTP HQ+TT+VQES+D Y+AKGY YSR NPTV VLEA++A+LE AG+CC TGMAATVTVM+A L GDHCV+TDCSYGGTNRAAR +F + FSFVDFRD V AA +PNTKL+FSETPA Sbjct: 73 LVHAGVAPDAATGGILTPIHQSTTFVQESIDAYMAKGYSYSRTTNPTVAVLEAKVAELEGAAGSCCFATGMAATVTVMSAFLSQGDHCVLTDCSYGGTNRAARELFGKFGVEFSFVDFRDADAVAAACRPNTKLVFSETPA 213
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: F0Y3F4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3F4_AURAN) HSP 1 Score: 198 bits (504), Expect = 1.570e-59 Identity = 97/142 (68.31%), Postives = 116/142 (81.69%), Query Frame = 1 Query: 46 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 471 +LVH G++PD++TGAILTP HQ+TT+VQES+DKY+ KGY YSR NPTV+VLEA+I+ LE+ AG C TGMAATVTVM+A L+ GDHCV+T+CSYGGTNR AR+ F I FSFVDFRD V+AAI P TKLIFSETPA Sbjct: 17 KLVHAGVSPDKETGAILTPIHQSTTFVQESIDKYMGKGYSYSRTTNPTVKVLEAKISSLESAAGTTCFATGMAATVTVMSAFLEQGDHCVLTNCSYGGTNRVARMQFMRYGIDFSFVDFRDLAAVKAAITPKTKLIFSETPA 158
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A7S3K336_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K336_9STRA) HSP 1 Score: 194 bits (493), Expect = 6.800e-58 Identity = 98/143 (68.53%), Postives = 111/143 (77.62%), Query Frame = 1 Query: 46 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPN-TKLIFSETPA 471 +LVH G++PD TGAILTP Q TT+VQES+D+Y+AKGY Y+R NPTV VLE ++A LEN AGACC TGMAATVTVM+A L GDHCV+TDCSYGGTNR AR F I FSFVDFRDP VE A+ P TKLIFSETPA Sbjct: 15 KLVHAGVSPDPATGAILTPIVQATTFVQESIDQYMAKGYSYTRTTNPTVHVLEEKVAALENAAGACCFSTGMAATVTVMSAFLSQGDHCVLTDCSYGGTNRVARKQFMQYGIEFSFVDFRDPANVEKAVIPGKTKLIFSETPA 157
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A7S3WA90_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WA90_EMIHU) HSP 1 Score: 194 bits (493), Expect = 2.240e-57 Identity = 93/142 (65.49%), Postives = 116/142 (81.69%), Query Frame = 1 Query: 46 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 471 +LVH G++PD TGAILTP +Q+TTYVQESVD+YLAKGY YSR NPTV VLE +IA+LE G GA C TGMAAT+ V+T+T++AGDHCVIT+CSYGGTNRA R +F D+ + F F+DF + +EA ++PNTKLIFSE+PA Sbjct: 51 KLVHAGVDPDPITGAILTPVYQSTTYVQESVDEYLAKGYSYSRTNNPTVTVLENKIAELEGGYGAACFSTGMAATIAVITSTMQAGDHCVITNCSYGGTNRACRTLFTDMGMEFDFIDFTELANIEAHLKPNTKLIFSESPA 192
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A813F511_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F511_POLGL) HSP 1 Score: 193 bits (490), Expect = 3.260e-57 Identity = 93/140 (66.43%), Postives = 113/140 (80.71%), Query Frame = 1 Query: 52 VHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 471 VH G++PDE+TGA+LTP +TT+VQESV+KYL KGY YSR NPTV LEA++A LENG GA C TGMAAT + + AT+ AGDHCVI+DCSYGGTNR+ R F+ L ++FSFVDFRDP IV A++PNTKL+FSETPA Sbjct: 40 VHSGVSPDERTGALLTPLFLSTTFVQESVEKYLEKGYSYSRTNNPTVSTLEAKLAVLENGYGAACFGTGMAATTSAICATMVAGDHCVISDCSYGGTNRSCREFFSHLGMSFSFVDFRDPEIVRKAMKPNTKLVFSETPA 179 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167982 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6999 ID=mRNA_6999|Name=jgi.p|Trimin1|167982|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=480bp|location=Sequence derived from alignment at Contig_54:2880..4412+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACAAACAGATTGCCACTGCTGCCAATTTGCATTGCTGCCAGGCAGCTback to top protein sequence of jgi.p|Trimin1|167982 >Trimin1|167982|e_gw1.54.236.1 ID=Trimin1|167982|e_gw1.54.236.1|Name=jgi.p|Trimin1|167982|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp MTNRLPLLPICIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLback to top mRNA from alignment at Contig_54:2880..4412+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6999 ID=mRNA_6999|Name=jgi.p|Trimin1|167982|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1533bp|location=Sequence derived from alignment at Contig_54:2880..4412+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_54:2880..4412+ >mRNA_6999 ID=mRNA_6999|Name=jgi.p|Trimin1|167982|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=480bp|location=Sequence derived from alignment at Contig_54:2880..4412+ (Tribonema minus UTEX_B_3156 )back to top |