Trimin1|167982|e_gw1.54.236.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|167982
Unique Name	Trimin1\|167982\|e_gw1.54.236.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	160

Homology

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A835YQ38_9STRA (Putative cystathione gamma lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ38_9STRA)

HSP 1 Score: 319 bits (818), Expect = 2.070e-110
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0

Query:    1 MTNRLPLLPICIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPALR 159
            MTNRLPLLPICIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPALR
Sbjct:    1 MTNRLPLLPICIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPALR 159

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A836CFW8_9STRA (Cystathionine gamma-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW8_9STRA)

HSP 1 Score: 256 bits (654), Expect = 4.610e-82
Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 0

Query:   14 ARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 157
            A QLVH GI+PDEKTGAILTP +Q TTYVQESVDKYLAKG+ YSR ANPTV+ LEA+IAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMF+DL ITFSFVDFRDP IVEAAI+PNTKLIFSETPA
Sbjct:   18 ATQLVHAGIDPDEKTGAILTPIYQATTYVQESVDKYLAKGFSYSRTANPTVKALEAKIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFSDLGITFSFVDFRDPAIVEAAIRPNTKLIFSETPA 161

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: D8LJS6_ECTSI (Cystathionine gamma-lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJS6_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 3.780e-67
Identity = 108/143 (75.52%), Postives = 127/143 (88.81%), Query Frame = 0

Query:   16 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAG-ACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 157
            +LVH GINPD++TGAILTP  Q+TT++Q+SV+KYL +G+ YSR ANPTV  LEA++A LE  AG ACCV TGMAATVTVM+A LKAGDHCVIT+CSYGGTNRAARVMF+DL +TFSFVDFRDP +V+AAI+PNTKLIFSETPA
Sbjct:   19 KLVHQGINPDKETGAILTPIVQSTTFIQDSVEKYLDRGFSYSRTANPTVAALEAKVAGLEGAAGGACCVATGMAATVTVMSAFLKAGDHCVITECSYGGTNRAARVMFSDLGVTFSFVDFRDPEVVKAAIRPNTKLIFSETPA 161

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A7S0TAJ6_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAJ6_9STRA)

HSP 1 Score: 204 bits (520), Expect = 5.970e-62
Identity = 101/142 (71.13%), Postives = 113/142 (79.58%), Query Frame = 0

Query:   16 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 157
            QLVH G+ PDE TGAILTP +Q TT+VQES+D+Y+AKGY YSR  NPTV VLE +IA LE  AGACC  TGMAATVTVM+A L  GDHCV+TDCSYGGTNR AR  F +  I FSFVDFRDP  V AAI+P TKL+FSETPA
Sbjct:   15 QLVHSGVAPDEATGAILTPIYQATTFVQESIDQYMAKGYSYSRTTNPTVRVLEQKIADLEKAAGACCFSTGMAATVTVMSAFLSQGDHCVLTDCSYGGTNRVARKQFMNYGIEFSFVDFRDPANVAAAIKPETKLVFSETPA 156

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A0L0FZV2_9EUKA (Cystathionine gamma-synthase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FZV2_9EUKA)

HSP 1 Score: 201 bits (510), Expect = 2.250e-60
Identity = 101/147 (68.71%), Postives = 116/147 (78.91%), Query Frame = 0

Query:   11 CIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 157
            C  + QLVH G+NPD  TGAILTP  Q TT+VQES+D YL+KGY YSR ANPTV  LE +IA++E+ AGA C  TGMAATVTVMTA ++AGDHCVIT+CSYGGTNR AR MF  L + FSFVDF D   +E AI+PNTKLIFSETPA
Sbjct:   15 CGQSTQLVHAGVNPDPTTGAILTPIVQATTFVQESIDLYLSKGYSYSRTANPTVRALENKIAEIEHAAGATCFSTGMAATVTVMTAFMRAGDHCVITNCSYGGTNRVARKMFMGLGMEFSFVDFTDLAEIEGAIKPNTKLIFSETPA 161

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A7S4E341_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E341_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.800e-60
Identity = 97/141 (68.79%), Postives = 112/141 (79.43%), Query Frame = 0

Query:   17 LVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 157
            LVH G+ PD  TG ILTP HQ+TT+VQES+D Y+AKGY YSR  NPTV VLEA++A+LE  AG+CC  TGMAATVTVM+A L  GDHCV+TDCSYGGTNRAAR +F    + FSFVDFRD   V AA +PNTKL+FSETPA
Sbjct:   73 LVHAGVAPDAATGGILTPIHQSTTFVQESIDAYMAKGYSYSRTTNPTVAVLEAKVAELEGAAGSCCFATGMAATVTVMSAFLSQGDHCVLTDCSYGGTNRAARELFGKFGVEFSFVDFRDADAVAAACRPNTKLVFSETPA 213

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: F0Y3F4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3F4_AURAN)

HSP 1 Score: 198 bits (504), Expect = 1.570e-59
Identity = 97/142 (68.31%), Postives = 116/142 (81.69%), Query Frame = 0

Query:   16 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 157
            +LVH G++PD++TGAILTP HQ+TT+VQES+DKY+ KGY YSR  NPTV+VLEA+I+ LE+ AG  C  TGMAATVTVM+A L+ GDHCV+T+CSYGGTNR AR+ F    I FSFVDFRD   V+AAI P TKLIFSETPA
Sbjct:   17 KLVHAGVSPDKETGAILTPIHQSTTFVQESIDKYMGKGYSYSRTTNPTVKVLEAKISSLESAAGTTCFATGMAATVTVMSAFLEQGDHCVLTNCSYGGTNRVARMQFMRYGIDFSFVDFRDLAAVKAAITPKTKLIFSETPA 158

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A7S3K336_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K336_9STRA)

HSP 1 Score: 194 bits (493), Expect = 6.800e-58
Identity = 98/143 (68.53%), Postives = 111/143 (77.62%), Query Frame = 0

Query:   16 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPN-TKLIFSETPA 157
            +LVH G++PD  TGAILTP  Q TT+VQES+D+Y+AKGY Y+R  NPTV VLE ++A LEN AGACC  TGMAATVTVM+A L  GDHCV+TDCSYGGTNR AR  F    I FSFVDFRDP  VE A+ P  TKLIFSETPA
Sbjct:   15 KLVHAGVSPDPATGAILTPIVQATTFVQESIDQYMAKGYSYTRTTNPTVHVLEEKVAALENAAGACCFSTGMAATVTVMSAFLSQGDHCVLTDCSYGGTNRVARKQFMQYGIEFSFVDFRDPANVEKAVIPGKTKLIFSETPA 157

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A7S3WA90_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WA90_EMIHU)

HSP 1 Score: 194 bits (493), Expect = 2.240e-57
Identity = 93/142 (65.49%), Postives = 116/142 (81.69%), Query Frame = 0

Query:   16 QLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 157
            +LVH G++PD  TGAILTP +Q+TTYVQESVD+YLAKGY YSR  NPTV VLE +IA+LE G GA C  TGMAAT+ V+T+T++AGDHCVIT+CSYGGTNRA R +F D+ + F F+DF +   +EA ++PNTKLIFSE+PA
Sbjct:   51 KLVHAGVDPDPITGAILTPVYQSTTYVQESVDEYLAKGYSYSRTNNPTVTVLENKIAELEGGYGAACFSTGMAATIAVITSTMQAGDHCVITNCSYGGTNRACRTLFTDMGMEFDFIDFTELANIEAHLKPNTKLIFSESPA 192

[Close]

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Match: A0A813F511_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F511_POLGL)

HSP 1 Score: 193 bits (490), Expect = 3.260e-57
Identity = 93/140 (66.43%), Postives = 113/140 (80.71%), Query Frame = 0

Query:   18 VHFGINPDEKTGAILTPTHQTTTYVQESVDKYLAKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKAGDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKLIFSETPA 157
            VH G++PDE+TGA+LTP   +TT+VQESV+KYL KGY YSR  NPTV  LEA++A LENG GA C  TGMAAT + + AT+ AGDHCVI+DCSYGGTNR+ R  F+ L ++FSFVDFRDP IV  A++PNTKL+FSETPA
Sbjct:   40 VHSGVSPDERTGALLTPLFLSTTFVQESVEKYLEKGYSYSRTNNPTVSTLEAKLAVLENGYGAACFGTGMAATTSAICATMVAGDHCVISDCSYGGTNRSCREFFSHLGMSFSFVDFRDPEIVRKAMKPNTKLVFSETPA 179

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|167982 vs. uniprot

BLAST of jgi.p|Trimin1|167982 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YQ38_9STRA	2.070e-110	100.00	Putative cystathione gamma lyase n=1 Tax=Tribonema...	[more]
A0A836CFW8_9STRA	4.610e-82	88.89	Cystathionine gamma-lyase n=1 Tax=Tribonema minus ...	[more]
D8LJS6_ECTSI	3.780e-67	75.52	Cystathionine gamma-lyase n=2 Tax=Ectocarpus TaxID...	[more]
A0A7S0TAJ6_9STRA	5.970e-62	71.13	Hypothetical protein n=1 Tax=Chrysocystis fragilis...	[more]
A0A0L0FZV2_9EUKA	2.250e-60	68.71	Cystathionine gamma-synthase n=1 Tax=Sphaeroforma ...	[more]
A0A7S4E341_9STRA	3.800e-60	68.79	Hypothetical protein n=3 Tax=Pelagomonas calceolat...	[more]
F0Y3F4_AURAN	1.570e-59	68.31	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S3K336_9STRA	6.800e-58	68.53	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S3WA90_EMIHU	2.240e-57	65.49	Hypothetical protein n=1 Tax=Emiliania huxleyi Tax...	[more]
A0A813F511_POLGL	3.260e-57	66.43	Hypothetical protein n=1 Tax=Polarella glacialis T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000277	Cys/Met metabolism, pyridoxal phosphate-dependent enzyme	PFAM	PF01053	Cys_Met_Meta_PP	coord: 16..157 e-value: 3.9E-38 score: 131.0
IPR000277	Cys/Met metabolism, pyridoxal phosphate-dependent enzyme	PANTHER	PTHR11808	TRANS-SULFURATION ENZYME FAMILY MEMBER	coord: 15..157
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 13..158 e-value: 3.7E-41 score: 142.9
None	No IPR available	PANTHER	PTHR11808:SF80	CYSTATHIONINE BETA LYASE	coord: 15..157
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 16..156

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_54	contig	Contig_54:2880..4412 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|167982	mRNA_6999	Tribonema minus UTEX_B_3156	mRNA	Contig_54 2880..4412 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|167982|e_gw1.54.236.1 ID=Trimin1|167982|e_gw1.54.236.1|Name=jgi.p|Trimin1|167982|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp
MTNRLPLLPICIAARQLVHFGINPDEKTGAILTPTHQTTTYVQESVDKYL
AKGYCYSRDANPTVEVLEAEIAQLENGAGACCVCTGMAATVTVMTATLKA
GDHCVITDCSYGGTNRAARVMFADLAITFSFVDFRDPRIVEAAIQPNTKL
IFSETPALR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000277	Cys/Met-Metab_PyrdxlP-dep_enz
IPR015421	PyrdxlP-dep_Trfase_major
IPR015424	PyrdxlP-dep_Trfase