mRNA_8226 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167758
Unique NamemRNA_8226
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A835YZC1_9STRA (Putative TenA family transcriptional activator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC1_9STRA)

HSP 1 Score: 495 bits (1275), Expect = 6.680e-177
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
Query:    1 MPLLHLKEPQYSNSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAALEVRGD 765
            MPLLHLKEPQYSNSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAALEVRGD
Sbjct:    1 MPLLHLKEPQYSNSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAALEVRGD 255          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A835YY94_9STRA (TENA_THI-4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY94_9STRA)

HSP 1 Score: 290 bits (743), Expect = 9.600e-97
Identity = 159/196 (81.12%), Postives = 165/196 (84.18%), Query Frame = 1
Query:  253 EGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAA--------------------------AAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAG-GLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAALEVR 759
            EG+RAFH L+GS LEELTLHEAFAE+WGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAA                          A+AA+ DTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAG G+GRYDALLAHYRTAMALEYAFFDASGLEAGLKGDP ALEVR
Sbjct:    2 EGLRAFHGLIGSVLEELTLHEAFAEEWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAFPAPITTEHSSEPASERFAAERASESASAADGDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGEGMGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPVALEVR 197          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A540VFZ6_9CHLR (TenA family protein n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VFZ6_9CHLR)

HSP 1 Score: 164 bits (416), Expect = 4.610e-47
Identity = 107/225 (47.56%), Postives = 129/225 (57.33%), Query Frame = 1
Query:   40 SVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALL-AHYRTAMALEYAFFDAS 711
            ++S  LW+A +E A   L HPFV  +ATG LP +AFQ Y+ QDA +LQA       FAR Y  A  ++PD EG +AFH+L G  LEEL LH  +A +WGVNL        P PATR YT FLL              AA+APCMRLYA+LG  LA    AA  D+ YR WI  YSSPEF A A  +E L+D+Y       GR D L  + Y  AMA E  FF A+
Sbjct:    2 TLSTDLWQASRELAQACLAHPFVQGIATGKLPIQAFQFYVGQDAYFLQA-------FARGYSVAAARSPDWEGFQAFHELAGGVLEELRLHHEYAHRWGVNLGAVT----PSPATRRYTDFLLATAWSQE--VGVTAAALAPCMRLYAYLGQRLAEQGPAA--DSAYREWIQTYSSPEFDALARRLEGLVDRY-------GRDDDLTRSAYAYAMACELDFFQAA 204          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A7C4WPV2_9CHLR (TenA family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4WPV2_9CHLR)

HSP 1 Score: 160 bits (406), Expect = 1.300e-45
Identity = 102/227 (44.93%), Postives = 130/227 (57.27%), Query Frame = 1
Query:   46 SARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAG 726
            S   W+AC++       HPFV  +A+GALP+E F  YI QDA +L+        FARAY  AL KAPD E M AF KL+    EELTLH+ +A +WGV+L        P PATRAYT FLL++   +      ++AAM PCMRLYA LG TL       +  +PYR W+  Y+S +F A A  +E LLD+      G  R   +L  YRTAM LE  FFDA+  + G
Sbjct:    3 SQDFWKACQDLVRICEAHPFVRGIASGALPRERFAFYIGQDAFFLET-------FARAYALALAKAPDRETMAAFRKLLNGVFEELTLHQGYAARWGVDLTPE-----PEPATRAYTDFLLRVA--ALEPVGHIVAAMTPCMRLYAHLGQTLHPHT---DPQSPYREWVETYASADFEALARQLEELLDRLP----GEERIQRVL--YRTAMELEVRFFDAAWGKGG 206          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: E6SM79_THEM7 (Aminopyrimidine aminohydrolase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) TaxID=644966 RepID=E6SM79_THEM7)

HSP 1 Score: 159 bits (402), Expect = 1.700e-44
Identity = 100/223 (44.84%), Postives = 131/223 (58.74%), Query Frame = 1
Query:   43 VSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDAS 711
            ++  LWR   + A   L HPFV  +  G LP+  F  Y+ QDA +L+A       FARAY  A+ KAPD + M     L+   L+EL LH+ +A +WGV+L     R  P  ATRAYT FLL++   SR+  A + AAM PCMRLYAFLG +L     A   D PYR W+  Y SP+F + A  +E L++++ A AGG G    L   YRTAM LE+AFFDA+
Sbjct:   41 LAGELWRQNLDLARRCLEHPFVQGIGRGDLPRSRFAWYVGQDAAFLEA-------FARAYALAIAKAPDLDTMTTLRHLLDGVLDELRLHQKYAARWGVDL-----RPAPSFATRAYTGFLLEVAW-SRAVGA-IAAAMTPCMRLYAFLGQSLRPRVTA---DNPYREWVETYGSPDFESLAVRLEELVNRWHATAGGPGEVAPL---YRTAMELEFAFFDAA 243          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A7S3XK69_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK69_HETAK)

HSP 1 Score: 159 bits (401), Expect = 2.090e-44
Identity = 98/197 (49.75%), Postives = 120/197 (60.91%), Query Frame = 1
Query:   43 VSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAA--AAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAA 627
            +S  LW    +EA  SL+HP+V+ L  G L KE+F  YI QDA +L++       FA+AY  AL K  D EG+ AFH L+G+ L+EL LH   AE+WGV+LA   +   P  AT  YT FL+     + ST ADVLAAMAPCMRLYA LG TL AA          P+  W+  Y+S EF AAA TVE LLDKYA A
Sbjct:   49 ISQILWEDNLKEAQKSLHHPWVVGLGLGTLEKESFAQYIAQDAFFLES-------FAKAYAFALGKCSDREGIVAFHGLIGAVLDELKLHSGLAERWGVDLAALRE---PKQATDDYTGFLMATAQAADSTPADVLAAMAPCMRLYAHLGRTLRAAFPERLGRPGHPFAEWVDTYASDEFEAAARTVEDLLDKYAGA 235          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: UPI001CB76B4C (TenA family protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB76B4C)

HSP 1 Score: 156 bits (395), Expect = 5.520e-44
Identity = 102/226 (45.13%), Postives = 126/226 (55.75%), Query Frame = 1
Query:   40 SVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIG--GDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDAS 711
            S++ RLW    + A  +L HPFV  LA G LP+E F  Y+ QDA +LQA       FAR Y  A+ ++PD  G+ AF  L+    EEL LH+ +A +WGV+LA       P PAT AYT FLL     G    TCA    AM PCMRLYA LG +LA  AA      PY  W+  Y+ P F   AAT+E LLD+YAA    + R       YR AM LE AFF+A+
Sbjct:    2 SLARRLWSDSADLAGAALAHPFVRGLADGTLPQERFAGYVAQDAFFLQA-------FARGYAMAVVRSPDRAGLEAFADLLAGVREELRLHDGYAARWGVDLAVV----APAPATSAYTDFLLATAATGGLGETCA----AMTPCMRLYAHLGQSLAGRAAG-----PYTDWVTTYADPGFEGLAATLEELLDRYAADTPAVSR------SYRRAMELELAFFEAA 201          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A2W4KZJ8_9FIRM (Aminopyrimidine aminohydrolase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A2W4KZJ8_9FIRM)

HSP 1 Score: 155 bits (391), Expect = 3.830e-43
Identity = 97/222 (43.69%), Postives = 123/222 (55.41%), Query Frame = 1
Query:   40 SVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFD 705
            S + +LW A  + A   L HPFV  +A+G L +E F  Y+ QDA YL       +AFARAY  A+ KAPD  GM AF +L+  A  EL LH  +A +WG++L        P PATRAYT FLL++          + AAM PCMRLYA+LG  L       N  +PYR W+  Y+S +F A A  +E LLD+Y              +HYRTAM LEY FFD
Sbjct:   18 SRARQLWEASADWAEACLRHPFVRGIASGELARERFAFYVAQDAYYL-------TAFARAYALAVAKAPDRYGMGAFRELLDGATRELELHAGYAARWGIDLEPE-----PAPATRAYTDFLLRVAWSE--PVGRIAAAMTPCMRLYAYLGRALRPHL---NPASPYREWVETYASDDFEALARRLEELLDRYDDGTPETA------SHYRTAMRLEYDFFD 216          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A7Y5C5V0_9BACT (TenA family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C5V0_9BACT)

HSP 1 Score: 154 bits (389), Expect = 4.660e-43
Identity = 99/221 (44.80%), Postives = 130/221 (58.82%), Query Frame = 1
Query:   43 VSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFD 705
            ++  LW++  + A + L HPFVL LA G+LP + F  Y+ QDA +L A       FARAY  AL K+PD EG  AF  L+   L+EL LHE  A +  +NL        P PAT +YT FLL++   + +   +++AAM PCMRLYA+LG  LA      +  +PYR W+  YSSPEF   A  +E LLDKY     G G  D + A+YR AM LE+AFFD
Sbjct:    2 IAQMLWQSNGDLAKSCLDHPFVLGLADGSLPPQRFARYMEQDAYFLDA-------FARAYAMALAKSPDREGFFAFKDLLDGVLDELQLHEELAARHNLNLEPE-----PSPATVSYTDFLLRVA--AMAPVGEIVAAMTPCMRLYAWLGQELAEKL---SKTSPYRDWVMTYSSPEFEGLATRLEDLLDKY-----GKG-LDKVPANYRRAMELEFAFFD 199          
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: UPI001684A3A3 (TenA family protein n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001684A3A3)

HSP 1 Score: 154 bits (389), Expect = 5.090e-43
Identity = 99/224 (44.20%), Postives = 123/224 (54.91%), Query Frame = 1
Query:   40 SVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDAS 711
            ++S+ LW+  ++ A+  L HPFV  +ATG LPK  F  Y+ QDA +L+A       FARAY  A  KAPD E    FH L G  LEEL LH+ +A +WGV+L E      P PATR YT FL+       +    +  AMAPCMRLYAFLG  +A        D PY  WI  YSSP+F   A  +ERLLD+YA          A  + YR AM  E  FF A+
Sbjct:    2 TLSSELWQTNEDLAVACLEHPFVQGIATGTLPKSRFAYYVGQDAFFLEA-------FARAYSIAGAKAPDWEAFEVFHALAGGVLEELKLHQGYAAEWGVDLRET----EPAPATRRYTDFLMATAWSHEAGL--IATAMAPCMRLYAFLGRQIAKDGI---PDHPYAGWIRTYSSPDFEPLAEQLERLLDRYAEP------LPATHSTYRYAMLCERDFFQAA 203          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZC1_9STRA6.680e-177100.00Putative TenA family transcriptional activator n=1... [more]
A0A835YY94_9STRA9.600e-9781.12TENA_THI-4 domain-containing protein n=1 Tax=Tribo... [more]
A0A540VFZ6_9CHLR4.610e-4747.56TenA family protein n=1 Tax=Litorilinea aerophila ... [more]
A0A7C4WPV2_9CHLR1.300e-4544.93TenA family protein n=1 Tax=Chloroflexi bacterium ... [more]
E6SM79_THEM71.700e-4444.84Aminopyrimidine aminohydrolase n=1 Tax=Thermaeroba... [more]
A0A7S3XK69_HETAK2.090e-4449.75Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001CB76B4C5.520e-4445.13TenA family protein n=1 Tax=Blastococcus sp. CPCC ... [more]
A0A2W4KZJ8_9FIRM3.830e-4343.69Aminopyrimidine aminohydrolase n=1 Tax=Firmicutes ... [more]
A0A7Y5C5V0_9BACT4.660e-4344.80TenA family protein n=1 Tax=Candidatus Hydrogenede... [more]
UPI001684A3A35.090e-4344.20TenA family protein n=2 Tax=unclassified Microcole... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_53contigContig_53:772638..774617 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167758|e_gw1.53.55.1
BRITEko00000,ko00001,ko01000,ko03000
KEGG rclassRC00224,RC00652,RC02832
KEGG ReactionR02133,R09993
KEGG Pathwayko00730,ko01100,map00730,map01100
KEGG koko:K03707
EC3.5.99.2
Preferred nametenA
DescriptionCatalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
COG categoryK
Max annot lvl186801|Clostridia
EggNOG OGsCOG0819@1|root,COG0819@2|Bacteria,1TPK0@1239|Firmicutes,249B1@186801|Clostridia
Evalue2.79e-45
Seed ortholog644966.Tmar_1325
Hectar predicted targeting categoryother localisation
TranscriptId168080
TrackFilteredModels1
ProteinId167758
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167758gene_8226Tribonema minus UTEX_B_3156 geneContig_53 772638..774617 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8226_1exon_8226_1Tribonema minus UTEX_B_3156 exonContig_53 772638..772841 +
exon_8226_2exon_8226_2Tribonema minus UTEX_B_3156 exonContig_53 773131..773337 +
exon_8226_3exon_8226_3Tribonema minus UTEX_B_3156 exonContig_53 774183..774280 +
exon_8226_4exon_8226_4Tribonema minus UTEX_B_3156 exonContig_53 774359..774617 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8226CDS_8226Tribonema minus UTEX_B_3156 CDSContig_53 772638..772841 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167758Trimin1|167758|e_gw1.53.55.1Tribonema minus UTEX_B_3156 polypeptideContig_53 772638..774617 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8226 ID=mRNA_8226|Name=jgi.p|Trimin1|167758|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=768bp|location=Sequence derived from alignment at Contig_53:772638..774617+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCTCCTGCATCTGAAGGAGCCTCAATACTCAAATAGTGTGTCGGC
GAGGCTGTGGCGAGCCTGCAAGGAGGAGGCTCTGAATTCGCTGTACCACC
CATTTGTGCTGCAATTGGCCACTGGTGCCCTGCCGAAGGAGGCCTTCCAA
ATATACATCACTCAGGATGCCATCTACTTACAGGCAAGGCTGCGGAGGGA
AAGCGCGTTTGCGAGAGCTTACGGGCATGCGCTGACCAAGGCGCCTGACG
CAGAGGGCATGAGAGCATTCCACAAACTGATGGGCTCGGCACTGGAGGAG
CTGACATTGCATGAGGCATTTGCTGAGAAGTGGGGCGTGAATTTGGCAGA
AGCCATAGACAGGGATGGGCCGCTGCCAGCCACGCGCGCCTACACGTCAT
TCCTGCTGCAGATCGGCGGCGACTCGCGCAGCACCTGCGCCGACGTGCTG
GCGGCGATGGCGCCGTGCATGCGCCTGTACGCCTTCCTGGGAACGACGCT
GGCGGCGGCCGCTGCCGCTGCCAATAGCGACACGCCGTATCGCGCATGGA
TAGCCGCGTATTCATCGCCTGAGTTCGGCGCGGCAGCGGCGACGGTGGAG
CGGCTGCTGGACAAGTATGCGGCTGCTGCAGGGGGGTTAGGTAGGTATGA
TGCCCTGTTGGCGCACTACCGCACCGCCATGGCGCTGGAGTACGCGTTCT
TCGACGCCAGCGGCCTGGAGGCGGGGCTCAAGGGGGACCCCGCAGCTCTG
GAGGTGAGGGGGGATTGA
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protein sequence of jgi.p|Trimin1|167758

>Trimin1|167758|e_gw1.53.55.1 ID=Trimin1|167758|e_gw1.53.55.1|Name=jgi.p|Trimin1|167758|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=256bp
MPLLHLKEPQYSNSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQ
IYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEE
LTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVL
AAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVE
RLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAAL
EVRGD*
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mRNA from alignment at Contig_53:772638..774617+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8226 ID=mRNA_8226|Name=jgi.p|Trimin1|167758|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1980bp|location=Sequence derived from alignment at Contig_53:772638..774617+ (Tribonema minus UTEX_B_3156 )
ATGCCGCTCCTGCATCTGAAGGAGCCTCAATACTCAAATAGTGTGTCGGC GAGGCTGTGGCGAGCCTGCAAGGAGGAGGCTCTGAATTCGCTGTACCACC CATTTGTGCTGCAATTGGCCACTGGTGCCCTGCCGAAGGAGGCCTTCCAA ATATACATCACTCAGGATGCCATCTACTTACAGGCAAGGCTGCGGAGGGA AAGCGTTGGCAGTTGTCAGCATCGCAGCTTGAAAGCGCTCCTTAAAGTTA TTCAGAAGAAAGCCGTCTTTAACAAATACTTTGTAGTACACACATCTACA GATACTGCTTGGTGCTTGCTGAATTGTTTTTTTTCAGACACGGTGACCGC GCACATTGTGCACAGAGCCTGCGCCTTTGTGAATCATTATGGACAGTTTC GTGTCGTGTGTGTCTCTCAACTCTCAAGGACATGACAAAAAATGGCACTG TGACGTTCGTGATCTCATTGCTCTGCCTTCTGCATGCAACCAGGCGTTTG CGAGAGCTTACGGGCATGCGCTGACCAAGGCGCCTGACGCAGAGGGCATG AGAGCATTCCACAAACTGATGGGCTCGGCACTGGAGGAGCTGACATTGCA TGAGGCATTTGCTGAGAAGTGGGGCGTGAATTTGGCAGAAGCCATAGACA GGGATGGGCCGCTGCCAGCCACGCGCGCCTACACGTCATTCCTGCTGCAG GTACGTGCATCCAGCATTGTGTTTTACCGATTCATATCTACAATGCTTTG CTTTGGACACCAGGACAATGTGGTCGCACACAACCTATGCATCAAGTATA GAAGTATTGTATATATATGGAAGGCACTTGCGGCTAACCATCCATTGTCA TCTGAAGCTCTACGATCTTTTGATTCATTTTCATTAATATACTCATGCAC GTGAACTTGTCGGCCGTGAACATAAATGACGATTGTTGTGAGGGTGTCGT CGGCTGAAGTGGGTCTTCTCTCGTGTGCCACATGCCATTCCACCAGGCCA GTCAGCTCTTTGACTAGAGTGGTGATGGTGGCGGCCCTGAGATGAGGGAG GAAGAATGAGAAACACCACCAAACCACATGCACCACGTGCCACATGTTTT TGCGAGCTCACATTGGTGGTGCTAGGATGTTGTTGTCCATGGTCATGATT AGGTGCTGTTCTCCAGCAACTTGCCATCTCAACGTGGATGAAAGCAGGAG CCGCACCCCATTAACTTTATGAGTGCTCACATATCTGGGAGGATCACAGC CATTGCAAGCTGTCACAGCGTTGCATACCGCAACATGAACGGCACTGCTG CTAACGTGCCTGCCCAATGCAGATCTGAAGGGCCGGCTGCTGGGCGGTGC ATGACTGAAACCACAAGGGCGCTACCTCTGACTGCACCCGTGCAGTTGCC CGTCTATCCCCCCTCCCCCTCCCCCTGAGGCCCTTCCCTCCGCTGTTCGC CATTGCTATCTGGTACGTACACCATTGCCACCGCCGCGCCGGTCCTCATT GTGCCACCTCTCACAATGACTGCTGCCCTACTGCCTGCCGTACAGATCGG CGGCGACTCGCGCAGCACCTGCGCCGACGTGCTGGCGGCGATGGCGCCGT GCATGCGCCTGTACGCCTTCCTGGGAACGACGCTGGCGGCGGCGTTCCCT GCGCCTGTCACTACAGAACATTCCACAGAACCCGCCTCAGAGCGTTCCGC TGCAGAACTCACCTCAGAAAGCGCTGCCGCTGCCAATAGCGACACGCCGT ATCGCGCATGGATAGCCGCGTATTCATCGCCTGAGTTCGGCGCGGCAGCG GCGACGGTGGAGCGGCTGCTGGACAAGTATGCGGCTGCTGCAGGGGGGTT AGGTAGGTATGATGCCCTGTTGGCGCACTACCGCACCGCCATGGCGCTGG AGTACGCGTTCTTCGACGCCAGCGGCCTGGAGGCGGGGCTCAAGGGGGAC CCCGCAGCTCTGGAGGTGAGGGGGGATTGA
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Coding sequence (CDS) from alignment at Contig_53:772638..774617+

>mRNA_8226 ID=mRNA_8226|Name=jgi.p|Trimin1|167758|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=768bp|location=Sequence derived from alignment at Contig_53:772638..774617+ (Tribonema minus UTEX_B_3156 )
ATGCCGCTCCTGCATCTGAAGGAGCCTCAATACTCAAATAGTGTGTCGGC
GAGGCTGTGGCGAGCCTGCAAGGAGGAGGCTCTGAATTCGCTGTACCACC
CATTTGTGCTGCAATTGGCCACTGGTGCCCTGCCGAAGGAGGCCTTCCAA
ATATACATCACTCAGGATGCCATCTACTTACAGGCAAGGCTGCGGAGGGA
AAGCGCGTTTGCGAGAGCTTACGGGCATGCGCTGACCAAGGCGCCTGACG
CAGAGGGCATGAGAGCATTCCACAAACTGATGGGCTCGGCACTGGAGGAG
CTGACATTGCATGAGGCATTTGCTGAGAAGTGGGGCGTGAATTTGGCAGA
AGCCATAGACAGGGATGGGCCGCTGCCAGCCACGCGCGCCTACACGTCAT
TCCTGCTGCAGATCGGCGGCGACTCGCGCAGCACCTGCGCCGACGTGCTG
GCGGCGATGGCGCCGTGCATGCGCCTGTACGCCTTCCTGGGAACGACGCT
GGCGGCGGCCGCTGCCGCTGCCAATAGCGACACGCCGTATCGCGCATGGA
TAGCCGCGTATTCATCGCCTGAGTTCGGCGCGGCAGCGGCGACGGTGGAG
CGGCTGCTGGACAAGTATGCGGCTGCTGCAGGGGGGTTAGGTAGGTATGA
TGCCCTGTTGGCGCACTACCGCACCGCCATGGCGCTGGAGTACGCGTTCT
TCGACGCCAGCGGCCTGGAGGCGGGGCTCAAGGGGGACCCCGCAGCTCTG
GAGGTGAGGGGGGATTGA
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