mRNA_8226 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A835YZC1_9STRA (Putative TenA family transcriptional activator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC1_9STRA) HSP 1 Score: 495 bits (1275), Expect = 6.680e-177 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
Query: 1 MPLLHLKEPQYSNSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAALEVRGD 765
MPLLHLKEPQYSNSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAALEVRGD
Sbjct: 1 MPLLHLKEPQYSNSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAALEVRGD 255
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A835YY94_9STRA (TENA_THI-4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY94_9STRA) HSP 1 Score: 290 bits (743), Expect = 9.600e-97 Identity = 159/196 (81.12%), Postives = 165/196 (84.18%), Query Frame = 1
Query: 253 EGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAA--------------------------AAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAG-GLGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPAALEVR 759
EG+RAFH L+GS LEELTLHEAFAE+WGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAA A+AA+ DTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAG G+GRYDALLAHYRTAMALEYAFFDASGLEAGLKGDP ALEVR
Sbjct: 2 EGLRAFHGLIGSVLEELTLHEAFAEEWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAFPAPITTEHSSEPASERFAAERASESASAADGDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGEGMGRYDALLAHYRTAMALEYAFFDASGLEAGLKGDPVALEVR 197
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A540VFZ6_9CHLR (TenA family protein n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VFZ6_9CHLR) HSP 1 Score: 164 bits (416), Expect = 4.610e-47 Identity = 107/225 (47.56%), Postives = 129/225 (57.33%), Query Frame = 1
Query: 40 SVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALL-AHYRTAMALEYAFFDAS 711
++S LW+A +E A L HPFV +ATG LP +AFQ Y+ QDA +LQA FAR Y A ++PD EG +AFH+L G LEEL LH +A +WGVNL P PATR YT FLL AA+APCMRLYA+LG LA AA D+ YR WI YSSPEF A A +E L+D+Y GR D L + Y AMA E FF A+
Sbjct: 2 TLSTDLWQASRELAQACLAHPFVQGIATGKLPIQAFQFYVGQDAYFLQA-------FARGYSVAAARSPDWEGFQAFHELAGGVLEELRLHHEYAHRWGVNLGAVT----PSPATRRYTDFLLATAWSQE--VGVTAAALAPCMRLYAYLGQRLAEQGPAA--DSAYREWIQTYSSPEFDALARRLEGLVDRY-------GRDDDLTRSAYAYAMACELDFFQAA 204
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A7C4WPV2_9CHLR (TenA family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4WPV2_9CHLR) HSP 1 Score: 160 bits (406), Expect = 1.300e-45 Identity = 102/227 (44.93%), Postives = 130/227 (57.27%), Query Frame = 1
Query: 46 SARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDASGLEAG 726
S W+AC++ HPFV +A+GALP+E F YI QDA +L+ FARAY AL KAPD E M AF KL+ EELTLH+ +A +WGV+L P PATRAYT FLL++ + ++AAM PCMRLYA LG TL + +PYR W+ Y+S +F A A +E LLD+ G R +L YRTAM LE FFDA+ + G
Sbjct: 3 SQDFWKACQDLVRICEAHPFVRGIASGALPRERFAFYIGQDAFFLET-------FARAYALALAKAPDRETMAAFRKLLNGVFEELTLHQGYAARWGVDLTPE-----PEPATRAYTDFLLRVA--ALEPVGHIVAAMTPCMRLYAHLGQTLHPHT---DPQSPYREWVETYASADFEALARQLEELLDRLP----GEERIQRVL--YRTAMELEVRFFDAAWGKGG 206
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: E6SM79_THEM7 (Aminopyrimidine aminohydrolase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) TaxID=644966 RepID=E6SM79_THEM7) HSP 1 Score: 159 bits (402), Expect = 1.700e-44 Identity = 100/223 (44.84%), Postives = 131/223 (58.74%), Query Frame = 1
Query: 43 VSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDAS 711
++ LWR + A L HPFV + G LP+ F Y+ QDA +L+A FARAY A+ KAPD + M L+ L+EL LH+ +A +WGV+L R P ATRAYT FLL++ SR+ A + AAM PCMRLYAFLG +L A D PYR W+ Y SP+F + A +E L++++ A AGG G L YRTAM LE+AFFDA+
Sbjct: 41 LAGELWRQNLDLARRCLEHPFVQGIGRGDLPRSRFAWYVGQDAAFLEA-------FARAYALAIAKAPDLDTMTTLRHLLDGVLDELRLHQKYAARWGVDL-----RPAPSFATRAYTGFLLEVAW-SRAVGA-IAAAMTPCMRLYAFLGQSLRPRVTA---DNPYREWVETYGSPDFESLAVRLEELVNRWHATAGGPGEVAPL---YRTAMELEFAFFDAA 243
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A7S3XK69_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK69_HETAK) HSP 1 Score: 159 bits (401), Expect = 2.090e-44 Identity = 98/197 (49.75%), Postives = 120/197 (60.91%), Query Frame = 1
Query: 43 VSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAA--AAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAA 627
+S LW +EA SL+HP+V+ L G L KE+F YI QDA +L++ FA+AY AL K D EG+ AFH L+G+ L+EL LH AE+WGV+LA + P AT YT FL+ + ST ADVLAAMAPCMRLYA LG TL AA P+ W+ Y+S EF AAA TVE LLDKYA A
Sbjct: 49 ISQILWEDNLKEAQKSLHHPWVVGLGLGTLEKESFAQYIAQDAFFLES-------FAKAYAFALGKCSDREGIVAFHGLIGAVLDELKLHSGLAERWGVDLAALRE---PKQATDDYTGFLMATAQAADSTPADVLAAMAPCMRLYAHLGRTLRAAFPERLGRPGHPFAEWVDTYASDEFEAAARTVEDLLDKYAGA 235
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: UPI001CB76B4C (TenA family protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB76B4C) HSP 1 Score: 156 bits (395), Expect = 5.520e-44 Identity = 102/226 (45.13%), Postives = 126/226 (55.75%), Query Frame = 1
Query: 40 SVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIG--GDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDAS 711
S++ RLW + A +L HPFV LA G LP+E F Y+ QDA +LQA FAR Y A+ ++PD G+ AF L+ EEL LH+ +A +WGV+LA P PAT AYT FLL G TCA AM PCMRLYA LG +LA AA PY W+ Y+ P F AAT+E LLD+YAA + R YR AM LE AFF+A+
Sbjct: 2 SLARRLWSDSADLAGAALAHPFVRGLADGTLPQERFAGYVAQDAFFLQA-------FARGYAMAVVRSPDRAGLEAFADLLAGVREELRLHDGYAARWGVDLAVV----APAPATSAYTDFLLATAATGGLGETCA----AMTPCMRLYAHLGQSLAGRAAG-----PYTDWVTTYADPGFEGLAATLEELLDRYAADTPAVSR------SYRRAMELELAFFEAA 201
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A2W4KZJ8_9FIRM (Aminopyrimidine aminohydrolase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A2W4KZJ8_9FIRM) HSP 1 Score: 155 bits (391), Expect = 3.830e-43 Identity = 97/222 (43.69%), Postives = 123/222 (55.41%), Query Frame = 1
Query: 40 SVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFD 705
S + +LW A + A L HPFV +A+G L +E F Y+ QDA YL +AFARAY A+ KAPD GM AF +L+ A EL LH +A +WG++L P PATRAYT FLL++ + AAM PCMRLYA+LG L N +PYR W+ Y+S +F A A +E LLD+Y +HYRTAM LEY FFD
Sbjct: 18 SRARQLWEASADWAEACLRHPFVRGIASGELARERFAFYVAQDAYYL-------TAFARAYALAVAKAPDRYGMGAFRELLDGATRELELHAGYAARWGIDLEPE-----PAPATRAYTDFLLRVAWSE--PVGRIAAAMTPCMRLYAYLGRALRPHL---NPASPYREWVETYASDDFEALARRLEELLDRYDDGTPETA------SHYRTAMRLEYDFFD 216
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: A0A7Y5C5V0_9BACT (TenA family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C5V0_9BACT) HSP 1 Score: 154 bits (389), Expect = 4.660e-43 Identity = 99/221 (44.80%), Postives = 130/221 (58.82%), Query Frame = 1
Query: 43 VSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFD 705
++ LW++ + A + L HPFVL LA G+LP + F Y+ QDA +L A FARAY AL K+PD EG AF L+ L+EL LHE A + +NL P PAT +YT FLL++ + + +++AAM PCMRLYA+LG LA + +PYR W+ YSSPEF A +E LLDKY G G D + A+YR AM LE+AFFD
Sbjct: 2 IAQMLWQSNGDLAKSCLDHPFVLGLADGSLPPQRFARYMEQDAYFLDA-------FARAYAMALAKSPDREGFFAFKDLLDGVLDELQLHEELAARHNLNLEPE-----PSPATVSYTDFLLRVA--AMAPVGEIVAAMTPCMRLYAWLGQELAEKL---SKTSPYRDWVMTYSSPEFEGLATRLEDLLDKY-----GKG-LDKVPANYRRAMELEFAFFD 199
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Match: UPI001684A3A3 (TenA family protein n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001684A3A3) HSP 1 Score: 154 bits (389), Expect = 5.090e-43 Identity = 99/224 (44.20%), Postives = 123/224 (54.91%), Query Frame = 1
Query: 40 SVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLGTTLAAAAAAANSDTPYRAWIAAYSSPEFGAAAATVERLLDKYAAAAGGLGRYDALLAHYRTAMALEYAFFDAS 711
++S+ LW+ ++ A+ L HPFV +ATG LPK F Y+ QDA +L+A FARAY A KAPD E FH L G LEEL LH+ +A +WGV+L E P PATR YT FL+ + + AMAPCMRLYAFLG +A D PY WI YSSP+F A +ERLLD+YA A + YR AM E FF A+
Sbjct: 2 TLSSELWQTNEDLAVACLEHPFVQGIATGTLPKSRFAYYVGQDAFFLEA-------FARAYSIAGAKAPDWEAFEVFHALAGGVLEELKLHQGYAAEWGVDLRET----EPAPATRRYTDFLMATAWSHEAGL--IATAMAPCMRLYAFLGRQIAKDGI---PDHPYAGWIRTYSSPDFEPLAEQLERLLDRYAEP------LPATHSTYRYAMLCERDFFQAA 203 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167758 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8226 ID=mRNA_8226|Name=jgi.p|Trimin1|167758|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=768bp|location=Sequence derived from alignment at Contig_53:772638..774617+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCGCTCCTGCATCTGAAGGAGCCTCAATACTCAAATAGTGTGTCGGCback to top protein sequence of jgi.p|Trimin1|167758 >Trimin1|167758|e_gw1.53.55.1 ID=Trimin1|167758|e_gw1.53.55.1|Name=jgi.p|Trimin1|167758|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=256bp MPLLHLKEPQYSNSVSARLWRACKEEALNSLYHPFVLQLATGALPKEAFQback to top mRNA from alignment at Contig_53:772638..774617+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8226 ID=mRNA_8226|Name=jgi.p|Trimin1|167758|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1980bp|location=Sequence derived from alignment at Contig_53:772638..774617+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_53:772638..774617+ >mRNA_8226 ID=mRNA_8226|Name=jgi.p|Trimin1|167758|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=768bp|location=Sequence derived from alignment at Contig_53:772638..774617+ (Tribonema minus UTEX_B_3156 )back to top |