Trimin1|349944|estExt_Genemark1.C_Ctg_520028 (polypeptide) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349944 vs. uniprot
Match: A0A835YYC3_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC3_9STRA) HSP 1 Score: 597 bits (1538), Expect = 7.070e-213 Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 0 Query: 1 MVRRGALVAVAVAASCCGPCARAFVQPALRCSGSSSLRRGVRRPLAATLVLQQTDDSLAERSSLEAAEPAAEEGXXXXXQDAAHQGEGRVLVPLSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKKAPPRSFMNGIVALDSAFTREKVSFMRQKKREATTIARRSRRDATSTDPSEFKDGDEVVGVINKVTEKGLLVDVKTVSLLKMPIGAIRQARGGEFIENLRDLAQPGQSVRGRVVSAADKDGQAKLRLEFVDFVDDDGXXXXXXXESAGDGEA 378 MVRRGALVAVAVAASCCGPCARAFVQPALRCSGSSSLRRGVRRPLAATLVLQQTDDSLAERSSLEAAEPAAEEGXXXXXQDAAHQGEGRVLVPLSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKKAPPRSFMNGIVALDSAFTREKVSFMRQKKREATTIARRSRRDATSTDPSEFKDGDEVVGVINKVTEKGLLVDVKTVSLLKMPIGAIRQARGGEFIENLRDLAQPGQSVRGRVVSAADKDGQAKLRLEFVDFVDDDGXXXXXXXESAGDGEA Sbjct: 1 MVRRGALVAVAVAASCCGPCARAFVQPALRCSGSSSLRRGVRRPLAATLVLQQTDDSLAERSSLEAAEPAAEEGXXXXXQDAAHQGEGRVLVPLSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKKAPPRSFMNGIVALDSAFTREKVSFMRQKKREATTIARRSRRDATSTDPSEFKDGDEVVGVINKVTEKGLLVDVKTVSLLKMPIGAIRQARGGEFIENLRDLAQPGQSVRGRVVSAADKDGQAKLRLEFVDFVDDDGXXXXXXXESAGDGEA 378
BLAST of jgi.p|Trimin1|349944 vs. uniprot
Match: D7FJQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ8_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.300e-17 Identity = 80/268 (29.85%), Postives = 115/268 (42.91%), Query Frame = 0 Query: 94 LSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKKAPPRSFMNGIVALDSAFTREKVSFMRQKKREATTIARRSRRDATSTDPSEFKDGDEVVGVINKVTEKGLLVDVKTVSLLKMPIGAIRQARGGEFIENLRDLAQPGQSVRGRV--VSAADKDGQAKLRLEFVDFV 359 + ELKTG ++IG V D + +AAF+DC V R +G+ K+ P GFLH +DI R +KKG H++ YVKDVFPN+GR T++LDP I + +KV +R KR+ + R SRR+ GD V G + +V E LLVDV L + IR + G+ NL + +PG + R+ + + + G AK +DFV Sbjct: 121 IKELKTGDKVIGYVADTTNFAAFVDCSVVR-----------------------QGSKNKIVPVTGFLHLTDIKRPYALEGTPGVKDCE-----------VEVKKGIHLTAYVKDVFPNAGRMTLSLDPNINK---------------------DKVLKLRDSKRQRS---RNSRRERLHKKGRRHAVGDIVEGYVREVHESMLLVDVMFAQLSVLRASNIRNSEEGQKFVNLSNKTKPGDLITVRIEDIETSKRRG-AKDDKATIDFV 329
BLAST of jgi.p|Trimin1|349944 vs. uniprot
Match: W7TQN5_9STRA (Nucleic acid-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQN5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 7.540e-12 Identity = 50/134 (37.31%), Postives = 62/134 (46.27%), Query Frame = 0 Query: 94 LSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKK 227 L L+ G RL G VV V+ +AAFLD V R G GGKL C+ LH D+ +T +++G HVSVYVKDVFPNSGRF+VTLDP+I + K Sbjct: 105 LQALRPGMRLHGGVVGVTEFAAFLDVKVVRE-----------------------GPGGKLVRCNAMLHPHDVPEGIKLLRDSHNQPLPL------ETDPNVIRRGIHVSVYVKDVFPNSGRFSVTLDPSIDKAK 209
BLAST of jgi.p|Trimin1|349944 vs. uniprot
Match: K8Z3D9_NANGC (UV excision repair protein RAD23 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3D9_NANGC) HSP 1 Score: 76.3 bits (186), Expect = 2.140e-11 Identity = 50/134 (37.31%), Postives = 62/134 (46.27%), Query Frame = 0 Query: 94 LSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKK 227 L L+ G RL G VV V+ +AAFLD V R G GGKL C+ LH D+ +T +++G HVSVYVKDVFPNSGRF+VTLDP+I + K Sbjct: 105 LQALRPGMRLHGGVVGVTEFAAFLDVKVVRE-----------------------GPGGKLVRCNAMLHPHDVPEGIKLLRDSHNQPLPL------ETDPNVIRRGIHVSVYVKDVFPNSGRFSVTLDPSIDKAK 209
BLAST of jgi.p|Trimin1|349944 vs. uniprot
Match: A0A7S3M9U3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9U3_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.600e-9 Identity = 60/207 (28.99%), Postives = 85/207 (41.06%), Query Frame = 0 Query: 94 LSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKKAPPRSFMNGIVALDSAFTREKVSFMRQKKREATTIARRSRRDATSTDPSEFKDGDEVVGVINKVTEKGLLVDV 300 LS LKTG +L G VV +PYAAF+D GV R GG P H LH+SDI + + L K + +SV+VK+V +GRFTVT D +T+ ++L RE+ S R+ +RR RR P G G+++KV ++G+LV + Sbjct: 6 LSTLKTGMKLDGYVVSSTPYAAFIDAGVVRVSK-----------------------GGSFAPVHAMLHKSDIPKEVLNSLRKGQHQFPSPIPGP----SPLLPKNTPLSVFVKEVTKQTGRFTVTTDSTVTKAD----------LSLAHNQVREEASERRR--------SRRLRRQLEDITP-----GTTAEGLVDKVVDEGVLVTI 162
BLAST of jgi.p|Trimin1|349944 vs. uniprot
Match: A0A7S2UWN5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN5_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.750e-5 Identity = 41/137 (29.93%), Postives = 55/137 (40.15%), Query Frame = 0 Query: 91 LVPLSELKTGQRLIGSVVDVSPYAAFLDCGVSRSXXXXXXXXXXXXXXXXXXXXXXRGAGGKLCPCHGFLHRSDINRAAXXXXXXXXXXXXXXXXXXXDTGAAALKKGSHVSVYVKDVFPNSGRFTVTLDPAITRKK 227 +V L LKTG G V V+ + FL+CG+ R G G + G LH++D+ + L+KG V YVK VFP SGRF++T+DP ITR K Sbjct: 138 MVWLKTLKTGMPFYGGVKSVTNFGVFLECGIVRP-----------------------GRKGTVTRVQGMLHKTDLAPSMKVPFQYRPK------------ATKVLEKGMTVKCYVKAVFPQSGRFSLTMDPTITRAK 239 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349944 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|349944|estExt_Genemark1.C_Ctg_520028 ID=Trimin1|349944|estExt_Genemark1.C_Ctg_520028|Name=jgi.p|Trimin1|349944|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=379bpback to top |