mRNA_10426 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: A0A835YQW3_9STRA (Zot domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW3_9STRA) HSP 1 Score: 634 bits (1634), Expect = 1.710e-229 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALTTTLVMHYDEDPDLACELATVTEPNGDLPLNADIAIREVTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFLEVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRTPVHRKLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 957 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALTTTLVMHYDEDPDLACELATVTEPNGDLPLNADIAIREVTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFLEVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRTPVHRKLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR Sbjct: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALTTTLVMHYDEDPDLACELATVTEPNGDLPLNADIAIREVTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFLEVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRTPVHRKLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 319
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: A0A835ZH89_9STRA (DUF853 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH89_9STRA) HSP 1 Score: 395 bits (1014), Expect = 4.160e-134 Identity = 210/320 (65.62%), Postives = 246/320 (76.88%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALTTTLVMHYDEDPDLACELATVTEPNGDLPLNADIAIREVTVLVSPNYYQQM--RNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRE-LCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKN-EEYRDHKTFLEVMQ----VSGVVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRT-PVHRKLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLAL 933 LYLNTQE FCL+AV VQ GKSHTVG VVENC+LQ +I SA T T VMHYDED CEL+T+T D P + D+ +R TVLVSPNY+QQM + KY GVP T+V+PLLLDWD LSADQLK+IMQLS DQ+SS+S P YFGALL+KL EYQR +SMPPY +FRE L S FT++Q PLE+RL+LLD +V QSAKN +Y + KTF++ MQ G+VIA LSDPLIS ++ANC+FQV+LQQFC KEW+ PV RKLV+FDEAHKYIS+ D DGLAHEMLKV R MR GMRI+VSTQSPA LPHEMLAL Sbjct: 67 LYLNTQERFCLLAVGVQNGGKSHTVGAVVENCMLQLPGIIHSAPTATSVMHYDEDTTAQCELSTLTAAGADTPRSVDVFVRNTTVLVSPNYFQQMLVQEKYRGVPNTSVQPLLLDWDVLSADQLKIIMQLSFDQVSSSSVPHYFGALLNKLPEYQRCESMPPYHNFREQLSSKSSTGFTSSQMEPLELRLKLLDAVVQQSAKNVRDYSNRKTFMDAMQDAYDTQGIVIADLSDPLISKQQANCIFQVVLQQFCNKEWNGDKPVRRKLVVFDEAHKYISN-DGDGLAHEMLKVVRTMRLTGMRIVVSTQSPAELPHEMLAL 385
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: A0A4P9WBJ6_9FUNG (Uncharacterized protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WBJ6_9FUNG) HSP 1 Score: 214 bits (546), Expect = 8.950e-63 Identity = 128/329 (38.91%), Postives = 191/329 (58.05%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSA--LTTTLVMHYDEDPDLACELATVTEPNGDLPLNADIAIRE-VTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFLEVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQF------CGKEWHRTPVHRKLVIFDEAHKYIS-DRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 957 +YLNT PFCLVAV VQGAGKSH+V V+ENC+L IT A TLV HYD D C+ AT+T PN + + + E + +LVSP++Y Q + Y P VRPLL W ++A +K +M++ D+ PLY G++L L Q++ S P F+E LDF+ QS PL+ RL L+++L+ +S++N + + VVI L+DP++S+ ++ +F+V+L++F CGK LV+ DEAHK+++ SD L ++++ R MRH GMR++VS+QSP +P E+L L SV +VH+ Sbjct: 63 VYLNTDAPFCLVAVGVQGAGKSHSVSTVIENCMLDVPR-ITHADKPCATLVFHYDTDQANYCQAATLTSPNESARIPPPVPVVERLIILVSPSFYYQRKRFYGNWPNCEVRPLLFRWREMTAGTIKSLMRVPIDK----DPPLYMGSVLGLLRRLQKEDSFPTLASFKEQLET--LDFSTTQSAPLQQRLSLIESLLAESSENAALPERIDLADACAPGTVVICDLTDPMLSAPESRGIFEVVLERFRTLSLKCGK----------LVVLDEAHKFLTHSTSSDELGSTIVELVRQMRHHGMRVVVSSQSPMTIPDELLELASVCLVHK 374
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: A0A7S3HAL9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAL9_9STRA) HSP 1 Score: 219 bits (557), Expect = 4.040e-62 Identity = 133/333 (39.94%), Postives = 195/333 (58.56%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALTTT------LVMHYDEDPDLACELATVTEPNGDLPLNADIAIREVTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRE----LCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFL-EVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRTPVHRKLVIFDEAHKYISDRDSDG---LAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 957 +YL+T +PFC V + VQGAGKSHT+ +++ENC+L S ++ + LV+HYD+ CE + P L L D+ ++ + VL SP YY Q + Y V PLL DWD L+A QLK +M+LS LY +L+KL EYQR +P + F + LC+ G Q+ PL+ RL LL T+V +SA NE+ R+H L +MQ +V+A L+DP++S+ +A VFQVLL+QF G H K+V FDEAHKY++ + G L++ ++ R MRH+G+R+++STQSP +P E+L L SV ++H+ Sbjct: 203 VYLDTTDPFCAVCIGVQGAGKSHTMNVILENCMLNTVSAENISVVSIPQPMCGLVLHYDQSESNCCEAVGLKSPAASLSLYPDLKVQRLVVLASPTYYLQRKAFYGN--SCEVIPLLFDWDTLTATQLKKLMRLSDSDAQ-----LYVSVILNKLREYQRKNKIPSFDGFLDEVMALCNVQG------QNAPLQQRLELLKTVVRESAPNEDLREHSHSLASLMQAGTLVVADLTDPMMSADEACGVFQVLLEQFRG---HPLGDVGKVVTFDEAHKYLN-KSGPGCVELSNAIVDTVRLMRHEGIRVLISTQSPLTMPPELLELTSVTILHK 518
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: A0A0H5R565_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R565_9EUKA) HSP 1 Score: 213 bits (541), Expect = 1.240e-61 Identity = 123/329 (37.39%), Postives = 196/329 (59.57%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALT-TTLVMHYDEDPDLACELATVT---EPNGDLPLNADIAIREVTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFLEVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQF------CGKEWHRTPVHRKLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 957 ++LNT PF +AV VQG+GKSH++ +++E+CL+ + +I + LV HYD D CE+A +T + DLP+ ++E+ +LVSP ++ Q Y P TVRPLL W L+A L +MQ+ D+ S PLY GALLD L + Q+ P +Q F+ S L+FT AQ PL +RL+L+++L+ +S +N + +++ VVI ++DP++++ +A +F+V+L++F CGK L +FDEAHKY+ +D L+ ++++ R MRH GMRI+VS+QSPA +P E++ L S+ +VH+ Sbjct: 110 IFLNTSVPFTAIAVGVQGSGKSHSLSVIMESCLINYPPVIRAHKPCAALVFHYDTDQANYCEVAFLTFRSKMMPDLPV-----VKELVILVSPAFFTQRSKFYRDWPNCTVRPLLFRWRDLTAGILLALMQVDMDK----SPPLYLGALLDLLRKLQKKNEYPTFQSFKNQLSS--LEFTPAQLAPLTLRLQLIESLLSESTENVDLYKSVDLEHIIKSGTVVICDMTDPMMTAGEARGIFEVVLEKFRTLPTTCGK----------LAVFDEAHKYMKSEGNDRLSETIIELSRQMRHHGMRIVVSSQSPATIPAELIELSSICIVHK 417
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: A0A0D2VFC2_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VFC2_CAPO3) HSP 1 Score: 206 bits (525), Expect = 2.520e-57 Identity = 133/330 (40.30%), Postives = 190/330 (57.58%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQF------ESMITSALTTTLVMHYDEDPDLACELATVTEPNGDLPLNADIAIREVTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDF----RELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYR-DHKTFLEVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRTPVHRKLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 957 ++LNT EPFCLVAV VQGAGKSHT+ +V+ENCL+ E + + LV+HYD++ CE + P+ L ++A + ++ VLVSP+YY Q R Y TV+PLL W LSAD +K +M+ I LY ++LD L YQRD P +Q F RE C G Q LE R L+ +V +S+ N++ R L+ + +V+A L+DPL+S +AN +FQVL +QF + H + K++ DEAHK+++ +DGL++ ++ R MRH GMR+IVSTQSP L E+L LVSV ++HR Sbjct: 369 IFLNTHEPFCLVAVGVQGAGKSHTMSVVLENCLVPNPHPAGREIVRLNRPMAGLVLHYDQNTASVCEATGLISPDPSLQISA-LPRDKLVVLVSPSYYHQRRKFYGAY--CTVKPLLFRWSTLSADHIKKLMR-----IKDTDSQLYVSSMLDLLRRYQRDNKTPDFQGFMEQVREKCQLPG------QGGALEQRASFLEAMVAESSLNQDLRASGADLLQCIAPGSLVVADLTDPLLSRDEANGIFQVLTEQF--RTAHVSG--GKILALDEAHKFMNGLSTDGLSNAIVDAARLMRHDGMRVIVSTQSPKALAPELLELVSVAMLHR 680
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: R1FM47_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FM47_EMIHU) HSP 1 Score: 204 bits (520), Expect = 2.970e-57 Identity = 132/337 (39.17%), Postives = 191/337 (56.68%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFE--SMITSALTTTLVMHYDEDPDLACELATVTEPNGDLPLNADIAIREVT----------VLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRE----LCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFL-EVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRTPVHRKLVIFDEAHKYISDR-DSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 957 +YLN +PFCL++V VQGAGKSHT V+E CLL F S + ++ LV HYD+ CE + +P+ + ++A V+ VL SP++Y Q + Y GV V+PLL W L A QLK++M+L +S LY +L+ L YQR + +PPYQ F + LCS + Q+ PL R++LL + ++ NE RD L EVM +V+ L+DP+++ AN VFQVLL+ F K+ H KLV+FDEAH+Y+ + D LA E+ R MRH+G+R+++STQSP +P E+L LV+++V HR Sbjct: 161 VYLNVTDPFCLISVGVQGAGKSHTTNCVLETCLLPFAPLSRVRQPMSV-LVCHYDQSEANCCEATGLGQPSHGVAGLLELAGSAVSAPCLGHDSLLVLCSPSFYLQRKEYYAGV--CVVKPLLFRWGRLKAQQLKMLMKLDE-----SSTQLYVALMLEMLRGYQRARKVPPYQQFMKELEALCS-------SQQAGPLRQRMQLLSAFIWEAECNESLRDVGADLSEVMAAGRMVVVDLTDPMMAPADANGVFQVLLESFRFKQVHGAG---KLVVFDEAHRYMGMAGEGDALAREITDCARLMRHEGLRLMISTQSPKAMPEELLELVTLLVAHR 479
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: L1IX66_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IX66_GUITC) HSP 1 Score: 195 bits (496), Expect = 6.660e-56 Identity = 130/335 (38.81%), Postives = 191/335 (57.01%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALT---TTLVMHYDEDPDLACELATVTEPNGDLP--LNA--------DIAIREVTVLVSPNYYQQMRNKY-EGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQS-MPPYQDFRELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEY-RDHKTFLEVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRTPVHRKLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 957 +YLNT EPFC+ AV VQG GKSHT+G V+E C+L F S L TTLV+HYD +P E + PN L L A ++ +++V VLVSP YY+Q + Y +GV TV+PLL W+ L++D +K IM+L + LY + L QR+ S M + ++L S L Q+ PL R++LL ++V +S+ N R + + +VI L+DP+++S +AN +FQ+L++QF H T KL++ DEAHKY+ +SDGL+ ++ + R MRH MR+ VSTQ+P+ L E+L L+S V+HR Sbjct: 1 VYLNTSEPFCMAAVGVQGGGKSHTIGCVLEACMLPFPSSKVVNLNKPMTTLVLHYDTNPQAKVEATGLMSPNTMLEQMLRANSKTGAPCELNLKDVVVLVSPCYYKQRQQYYGKGV---TVKPLLFKWNRLTSDHIKRIMRLKEED-----NQLYVSMMTQLLRSNQRNNSSMSLAELLKQLQSECKL---TTQAGPLAQRIQLLQSIVQESSVNTSLARTSSDLQDACKPGKLVIVDLTDPMLTSAEANSIFQILVEQFRTLGGHVTG---KLLVLDEAHKYMQGVESDGLSQSIVNIARLMRHDNMRLAVSTQNPSTLAPELLELISFAVLHR 321
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: A0A507EXR8_9FUNG (C2H2-type domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507EXR8_9FUNG) HSP 1 Score: 198 bits (504), Expect = 1.410e-55 Identity = 134/342 (39.18%), Postives = 190/342 (55.56%), Query Frame = 1 Query: 4 YLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMI--TSALTT------TLVMHYDEDPDLACELATVTEPNG--------DLPLNADIAIREVTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDFRELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFL-EVMQVSGVVIAHLSDPLISSKKANCVFQVLLQQF-------CGKEWHRTPVHRKLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVHR 957 +LN EPFCLVA+ VQGAGKSHT+ +V+E+CL + + S+L LV+H+D++P CE + P G PL + + ++TVLVSP YY Q R+ + G TT RPLL W LSAD +K +M+ I+ N LY LLD L +QR P + +FRE L Q PL RL LL++ + +S KN RDH L ++Q +++ L+DP++S+ + N VFQ+L++QF CGK LV DEAHK++ + SDGL +L R MRH G+R+++STQSP L E+L L+SV V+H+ Sbjct: 161 HLNVHEPFCLVALGVQGAGKSHTMSVVLESCLTPTKHIPGPDSSLVNINGPMCALVLHFDQNPHSLCESTGLISPAGYYVDHLGMKSPLPS-LKRDQMTVLVSPTYYLQ-RSAFYGSYCTT-RPLLFSWKTLSADHIKKLMR-----INDNENQLYMATLLDLLRNFQRSCQKPLFSEFRERVVK--LANVKGQEAPLIQRLNLLESFLLESEKNVTLRDHAVDLGTLIQAGRLIVVDLTDPMLSASEVNGVFQLLVEQFRVAPLQGCGK----------LVAVDEAHKFMDGQSSDGLGDAILDTIRLMRHDGVRVLLSTQSPRALRPEILELISVAVLHQ 482
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Match: A0A7S2LK38_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LK38_9STRA) HSP 1 Score: 195 bits (496), Expect = 7.830e-55 Identity = 132/337 (39.17%), Postives = 187/337 (55.49%), Query Frame = 1 Query: 1 LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALT---TTLVMHYDEDPDLACELATVTEPN-------GDLPLNADIAIRE-VTVLVSPNYYQQMRNKYEGVPRTTVRPLLLDWDALSADQLKVIMQLSSDQISSNSEPLYFGALLDKLAEYQRDQSMPPYQDF----RELCSGGGLDFTNAQSLPLEMRLRLLDTLVHQSAKNEEYRDHKTFLEVMQVSG--VVIAHLSDPLISSKKANCVFQVLLQQFCGKEWHRTPVHR--KLVIFDEAHKYISDRDSDGLAHEMLKVFRNMRHQGMRIIVSTQSPAILPHEMLALVSVMVVH 954 +YLNT PFC V V VQGAGKSHT V+E+CL+ F L T++V+HYD++ CE A + PN L N +E +LVSP +Y+Q R K+ G TVRPLL W +L+AD +K IM+ I S LY + L+ L YQR+ +P + F RE+C+ G Q PL+ R+ LL+++V +S N + L G ++IA L+DPL+S +AN +FQVL +QF RT + K + DEAHKY++ +DGL+ ++ V R MRH G+R++VSTQSP L E+L LV++ V+H Sbjct: 118 VYLNTHSPFCFVTVGVQGAGKSHTSSCVLESCLVPFAPGNVVKLNNPQTSMVLHYDQNITSICEAAGLLMPNPSVQKKMSSLGYNMSAVPKEKAVILVSPAFYKQ-RKKFYGDGLCTVRPLLFRWRSLTADHIKRIMR-----IESGDNQLYVASFLELLRGYQREALVPDFSSFLDQVREVCNAKG------QMSPLQQRIALLESVVAESKTNAGLINESLDLITCTKDGYQLIIADLTDPLLSKDEANGLFQVLTEQF------RTLPTKGGKCLFLDEAHKYMTGEKADGLSEAIVNVARLMRHDGVRLVVSTQSPKALAPELLELVTIAVLH 436 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134327 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10426 ID=mRNA_10426|Name=jgi.p|Trimin1|134327|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=957bp|location=Sequence derived from alignment at Contig_49:30589..31914- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTTTACCTCAATACCCAGGAGCCCTTCTGTCTCGTCGCTGTCGACGTTCAback to top protein sequence of jgi.p|Trimin1|134327 >Trimin1|134327|gw1.49.9.1 ID=Trimin1|134327|gw1.49.9.1|Name=jgi.p|Trimin1|134327|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=319bp LYLNTQEPFCLVAVDVQGAGKSHTVGLVVENCLLQFESMITSALTTTLVMback to top mRNA from alignment at Contig_49:30589..31914- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10426 ID=mRNA_10426|Name=jgi.p|Trimin1|134327|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1326bp|location=Sequence derived from alignment at Contig_49:30589..31914- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_49:30589..31914- >mRNA_10426 ID=mRNA_10426|Name=jgi.p|Trimin1|134327|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=957bp|location=Sequence derived from alignment at Contig_49:30589..31914- (Tribonema minus UTEX_B_3156 )back to top |