mRNA_12624 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349767
Unique Name	mRNA_12624
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349767 vs. uniprot
Match: A0A835YRX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX9_9STRA)

HSP 1 Score: 498 bits (1283), Expect = 7.450e-175
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 1

Query:    1 MVISSCVACTLAAIHGHFEVLRWLHANECPWDEGTCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGHQEVLEWARAWMPRDDGLSAAVRKGLEELGKVASSRQAYSERPLAEARSARWSKSTRQLVKEEQYIDAISQIFDDELDGGSSALLVPGLAAEVASXXXXXXXXXXXXXXXXXXXXAQLTVFWAFSEEPQEPVTAAVATMLKSATPATLPAIEARLIKMVEQRLAAQAGYLRATLATRVNSKKVPQVLFRHFAESDPVVRAAYKSYSYETAIARKGQRRSRRRARGGAEEGQGDKRPLRDNIPLPRIRLSSRH 1062
            MVISSCVACTLAAIHGHFEVLRWLHANECPWDEGTCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGHQEVLEWARAWMPRDDGLSAAVRKGLEELGKVASSRQAYSERPLAEARSARWSKSTRQLVKEEQYIDAISQIFDDELDGGSSALLVPGLAAEVASXXXXXXXXXXXXXXXXXXXXAQLTVFWAFSEEPQEPVTAAVATMLKSATPATLPAIEARLIKMVEQRLAAQAGYLRATLATRVNSKKVPQVLFRHFAESDPVVRAAYKSYSYETAIARKGQRRSRRRARGGAEEGQGDKRPLRDNIPLPRIRLSSRH
Sbjct:    1 MVISSCVACTLAAIHGHFEVLRWLHANECPWDEGTCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGHQEVLEWARAWMPRDDGLSAAVRKGLEELGKVASSRQAYSERPLAEARSARWSKSTRQLVKEEQYIDAISQIFDDELDGGSSALLVPGLAAEVASXXXXXXXXXXXXXXXXXXXXAQLTVFWAFSEEPQEPVTAAVATMLKSATPATLPAIEARLIKMVEQRLAAQAGYLRATLATRVNSKKVPQVLFRHFAESDPVVRAAYKSYSYETAIARKGQRRSRRRARGGAEEGQGDKRPLRDNIPLPRIRLSSRH 354

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349767 vs. uniprot

BLAST of jgi.p|Trimin1|349767 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YRX9_9STRA	7.450e-175	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_48	contig	Contig_48:651465..659778 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349767\|estExt_Genemark1.C_Ctg_480066
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Ribosome-binding factor A
Ec32 ortholog	Ec-10_005360.1
TranscriptId	350089
Track	FilteredModels1
ProteinId	349767

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349767	gene_12624	Tribonema minus UTEX_B_3156	gene	Contig_48 651465..659778 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349767	Trimin1\|349767\|estExt_Genemark1.C_Ctg_480066	Tribonema minus UTEX_B_3156	polypeptide	Contig_48 651465..659778 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12624_9	exon_12624_9	Tribonema minus UTEX_B_3156	exon	Contig_48 651465..651749 -
exon_12624_8	exon_12624_8	Tribonema minus UTEX_B_3156	exon	Contig_48 652449..652535 -
exon_12624_7	exon_12624_7	Tribonema minus UTEX_B_3156	exon	Contig_48 654044..654149 -
exon_12624_6	exon_12624_6	Tribonema minus UTEX_B_3156	exon	Contig_48 654311..654349 -
exon_12624_5	exon_12624_5	Tribonema minus UTEX_B_3156	exon	Contig_48 656040..656188 -
exon_12624_4	exon_12624_4	Tribonema minus UTEX_B_3156	exon	Contig_48 657429..657479 -
exon_12624_3	exon_12624_3	Tribonema minus UTEX_B_3156	exon	Contig_48 659246..659293 -
exon_12624_2	exon_12624_2	Tribonema minus UTEX_B_3156	exon	Contig_48 659360..659642 -
exon_12624_1	exon_12624_1	Tribonema minus UTEX_B_3156	exon	Contig_48 659762..659778 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12624	CDS_12624	Tribonema minus UTEX_B_3156	CDS	Contig_48 659762..659778 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_48:651465..659778-
coding sequence from alignment at Contig_48:651465..659778-

spliced messenger RNA

>mRNA_12624 ID=mRNA_12624|Name=jgi.p|Trimin1|349767|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1065bp|location=Sequence derived from alignment at Contig_48:651465..659778- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCATCTCCAGCTGTGTCGCGTGCACTCTCGCCGCCATACATGGGCA
CTTCGAGGTGCTGCGGTGGCTGCATGCCAATGAGTGTCCGTGGGACGAGG
GCACCTGCTGCGGCGCTGCCACTAGAGGGGACCTCGAGGTGCTGCAGTGG
GCACGCGCAAATGGGTGCCCCTGGGACAGCGGCACCTGCAGCGGCGCTGC
CCGCAGCGGCAACCTGGAGATGCTGCAGTGGGCCCGCGAACACGGATGTC
TGTGGGACGAGGATACCTGTGCCGAGGCTGCAGAGCAAGGTCATCTCGAG
CGCGGGCATCAGGAGGTGCTGGAGTGGGCGCGTGCATGGATGCCCCGAGA
CGACGGACTGTCGGCTGCCGTGAGGAAAGGCCTCGAAGAGCTCGGCAAGG
TGGCATCGTCGCGCCAGGCGTACTCAGAGCGGCCGCTAGCAGAGGCACGC
AGCGCGCGCTGGTCCAAGAGCACGCGGCAGCTGGTGAAGGAAGAGCAGTA
CATTGACGCCATCTCGCAGATCTTCGATGACGAGCTGGACGGCGGCTCGA
GCGCGCTGTTAGTGCCGGGGCTGGCCGCGGAGGTGGCGAGTGCGCTGTTC
GTGCCGGGCCTGGCTGCAGAAGTGGCGTCAGTGTCCATCTCTCCGGATTT
GGCGCAGCTCACTGTGTTTTGGGCATTCAGCGAGGAGCCACAGGAACCTG
TTACGGCAGCTGTCGCCACCATGCTGAAGTCTGCCACCCCCGCCACGCTA
CCCGCGATTGAAGCGCGGCTCATCAAGATGGTGGAGCAACGGCTCGCGGC
GCAGGCAGGGTACCTGCGCGCCACGCTGGCAACGCGTGTCAACTCCAAGA
AAGTTCCGCAGGTCCTCTTCCGTCACTTTGCTGAGTCGGACCCGGTGGTG
CGCGCCGCATACAAAAGCTACAGTTACGAAACGGCTATCGCGCGGAAGGG
GCAGCGGCGGTCGCGGCGGCGCGCGAGGGGGGGCGCGGAGGAGGGGCAGG
GGGACAAACGGCCGCTCAGAGACAACATCCCCCTTCCGCGCATTCGGCTC
TCTTCGCGGCACTAA

protein sequence of jgi.p|Trimin1|349767

>Trimin1|349767|estExt_Genemark1.C_Ctg_480066 ID=Trimin1|349767|estExt_Genemark1.C_Ctg_480066|Name=jgi.p|Trimin1|349767|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=355bp
MVISSCVACTLAAIHGHFEVLRWLHANECPWDEGTCCGAATRGDLEVLQW
ARANGCPWDSGTCSGAARSGNLEMLQWAREHGCLWDEDTCAEAAEQGHLE
RGHQEVLEWARAWMPRDDGLSAAVRKGLEELGKVASSRQAYSERPLAEAR
SARWSKSTRQLVKEEQYIDAISQIFDDELDGGSSALLVPGLAAEVASALF
VPGLAAEVASVSISPDLAQLTVFWAFSEEPQEPVTAAVATMLKSATPATL
PAIEARLIKMVEQRLAAQAGYLRATLATRVNSKKVPQVLFRHFAESDPVV
RAAYKSYSYETAIARKGQRRSRRRARGGAEEGQGDKRPLRDNIPLPRIRL
SSRH*

mRNA from alignment at Contig_48:651465..659778-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12624 ID=mRNA_12624|Name=jgi.p|Trimin1|349767|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8314bp|location=Sequence derived from alignment at Contig_48:651465..659778- (Tribonema minus UTEX_B_3156 )
ATGGTCATCTCCAGCTGGTGCAGTGGGCACATGCAATCAGGTGCCCAGGG
AGGGATAGTATTGGTCATTCTGCTGCAAGTGGCGGGCATCTGCGCATCCT
GCAGTGGGCACGGGCTAATGATCTCCCTTGGGACAGTGTCGCGTGCACTC
TCGCCGCCATACATGGGCACTTCGAGGTGCTGCGGTGGCTGCATGCCAAT
GAGTGTCCGTGGGACGAGGGCACCTGCTGCGGCGCTGCCACTAGAGGGGA
CCTCGAGGTGCTGCAGTGGGCACGCGCAAATGGGTGCCCCTGGGACAGCG
GCACCTGCAGCGGCGCTGCCCGCAGCGGCAACCTGGAGATGCTGCAGTGG
GCCCGCGAACACGGATGTCTGTGGGACGAGGATACCTGTGCCGAGGCTGC
AGAGCAAGGTCATCTCGAGGTGCTGCAGTGGGCACGCGCAAATGGGTGCC
CCTGGGACAGTCGTACCTGCCGCTCTGCCGCACAGCGCGGGCATCAGGAG
GTGCTGGAGTGGGCGCGTGCATGGATGCCCCGAGTAACGGATGCTAGCTG
CATTAGAGGGGGCGTAGGGAGGGGTGGGGGGGGGCGCATTAAGGAGCTCA
AAAGTGGAGCACGCAGCTGCGGTGGCAGCAACGGCAGTTAAGAGGCTCAG
GGCAAAATTATTGCCAAAATAGCTGAGGGCGGCCAATGCAGGTATGATAT
TGTATACCTGTCTATCATGCACTTCAACGGGGTTCAAGCTGATGCGCTGT
GCACAGTGCACAGTGCACATCCCCATTTTGTAAGTGACTAGCACAAGGCC
TTTGCGCCGTCATTGTAGGTCCATAATTGTCACACACCGTGGCCCCTTGC
CAAGCTTCGCAGCTGCGGACAGCTCTGAGTTTGAATGCACATGCACTCAC
CGGATGACCTTGGTGCAATTATGACTTCTGGTGTCTATATCCGCTGTCGG
ATGTTGGTGTGTGCCGAGATGCATGCAGTACATGCTAAGTAGTACATGTT
GTCGTTGCGACACTTTCAGACTGTCATACGACATGTAGATTCCTAACAGC
TAGATGCCAATCATCTGGGCTTTTTCGCGCCCTGAGCGAGAATTAATAAA
AATACATGATACAAAGTACATGATAGTACATGCCAGTATGTATGGGTACG
TGCGCCCGCCGCACGCATGGCGCAGCACTGCATGCTTCACTGTTGTGTCA
TGCACGCACCAGAAATTTCTCAAAGGTTGGCCAACGCGTAAATGCAAGCA
TCCACTCGCTCTTGTGTGTAAGTGCGCGAGCCGTACATCCATTGTTGCAC
GCACGTGCACTTAGACGACCACCACAGCGCTCAGGAGACTACGCAGTGTT
GCAGCCCATGTCTGCCATGCTGTCGAGTAAGTGGTCCCTGCGTACTCGCG
TTCGATACTATGCATGACATCGAGCGCTGTAGTATGTGATGAACACAATG
CTGAATGATTTGCCGTCTCATCTTGAATGCATTGGCGCAGCACACAGTCC
TACGATGGCGACGGCGCTGTTTTGCAGCCCCAGCTGCTATAGATCAAGTG
CACGACACAGAGCGGCTGTATCATGCGATCATCACATTGCGGTTGTCACA
ATTGCGGAGGCGCCACCGTTGTGTTATGAATGCGTCAGAATAGCACACTA
CAAAAAAAATGCTCCATCATGCTGAAATGCCATTGGGAAACAGGACCCGG
CGCTTTATGCAACAGTTAATGTTGCCTTGTTTTCATGTCCACACCCTGCT
GGCTATGCCATGCTGGCTCGTACCTGCCACAAATAATACATACCATGTGG
AGTGCTGCAGCTGCAGTGTAGTGTATGCACGATAGCTCATGACCGCACAC
AGCTCAGGCTGTCACTTGAGGTACCTGGCCTGCTTGAACGATGATGTATG
GATGACGGCATCATGACGCATTTTGATCTGTTGGCTGTGCGAGCGTTTGT
GAGACAATGCAGCTGTGTCAGCAAATGTTGTATTGTCAGCAAACGATTGA
GCTCCGCGTTTTTGCCTCATGATGAAACATCACTCATGGGCACTTCAACT
TGAGGTTGAAACTTCTTGGGCACTTTGTGCGACGGGCTCGTTTCAGTTTC
CATACATCTTGGCTAGAGTATGGCTCTTCGTGGGTGCCTTTGCGCCACTA
GGAGCGTAATGCAGACAGCTGGAAAAGCTTCGGCTTGTGAGGTGCGATGG
TGGCTTTCCATCAAACCAGGCGTAAGCAGCCCTACCAGAAGAGATTTCAG
CAGCAAGCAGCCGGCAGGCGGAAAAGCTAGCGGAGCCGGCGCTCAAAAGG
ACGACGGACTGTCGGCTGCCGTGAGGAAAGGCCTCGAAGAGCTCGGCAAG
GTAAACCTCAAAATGACTTCATGGTCGCCCCCCCCCCCCCCCCGATGATG
CGAGGACCCTTTCTTATAAGCCTTTGCTTGCATCACCGAGAGCTGGGAAG
TGTTGACGGCGCACGAAAACGCAGAATCTATGCAGAAGGTCGCGCCCGAC
ATGACTGTTTTGTAGGTGTGGACCACTTCACATGGGACAATGATGGGGAC
ATTGCAGAATATATTTGCTTCCTGTCCCCGAACTGGTATTGGTTTGACGA
GGTTTTGTTTTGAGGCTTGGTTGCAGGAACGTTGTGGCCTCTAGCTGCTG
CTGGATTTGAAACTTTCCACTAGCACTGTGAGGCACTTACTGTGCCGGCA
CGCACTTGAAGTGCAGGTCAAGTGTGAGTCACCATCTCATGACGTGTGGT
TTCCCCTTCTGAGACATTGACCTGCAGTTGATGCCTGCAACAGCTCCACG
CATGTAGCCTTTCCATGGTCGTCTTTCAAGGCCATAAAGTGACCTGTTTG
ACAAAGTCACTACATTGAATGACCTCTCCGTCAAGGCAATGAGAGGCACG
AATCGAGAGCGCCCTCATCGCACATGCTGGTCTTACGCAACGCAATGGTG
CTCTTCTCTGCTCCCTTTGGATCATACATAACCGCAACTTCAACTCTAGG
TGCTCCTGGGTGCTCTCGGGGGTTGACTCTCCCACGGCACCACAGGAAGC
ATGTGTAGCAAGCGTTGTTCATTCAACCCATCGATCGCCGCAGTCATGTG
ACCTTCGCGGGCATCAGCTCTGCTCTGAATGCGTCGCTTGCAGCGCGCAC
GCACAGCACAGTACATTCAGCCTGCCGGAAGTGGCAGTGGTGATGGTTGA
CTGCGTTGAGCTCTTCGATGATGCTGGAGTTGCCTCCTGAGAGTTACCTG
TGGCTCACTGCAGCAGCCGCTTTCAAGAGCCGTATACTGGATACCACCTC
TGGCTTTCGGCGCAGCAATTACTCATACGCTCAGCCCGTGGCTGTCACCG
CAGCAACCGTTTCTCATGTACTGTACATACGCATGTATCAATCGTACGTA
CTGCATGCAGGTAGCAGCGCCGCGCCAGGCGTACTCCGAACGACCTCCAG
AAGAGGCACCGCAGCAACCGTTTCTCACGTACTGTACATGCGCATGTAAC
ATTCGATGGCCAACCACACCGTGTCACCTAGAGCTCTACGATTTTTCTGA
TGTGTTTTGATCCGTTTTCATTCGGGTGTACTGCATGCAGGTGGCATCGT
CGCGCCAGGCGTACTCAGAGCGGCCGCTAGCAGAGGCACGCAGCGCGCGC
TGGTCCAAGAGCACGCGGCAGCTGGTGAAGGAAGAGCAGTACATTGACGC
CATCTCGCAGATCTTCGATGACGAGCTGGACGGCGGCTCGTGAGTGATGA
CTCTGACTCTGACTCACTGTACTGAGTGTGCATAAGTGATGAGGATGACT
CTGACTCATCGTACTGAGTGCACAAGTGATGACTCTGACTCTGACTCATT
GAACTGAGTGCACCAGTGATGAATCTGACTCTGACTTATTGCACTGAGTG
CATCCTGTTGATTTTGACTCGTCTATGCGTGAGTGCCAGGAAGAGGCGCT
AGGCAACTTGTTTCATGGGCGTGAGTGCGACTCTGAGTCGTGGTAAGGAA
TGGGTACAAGTAATGACACGCTCTTCGCGCGTCGGACTGTCGGGTATGAA
TCAGATTCTGACTTGCATGCACTGAGTGCGGACTGCGAGCATGGCCTTCC
ACGCTTCAGCGCGCATTAACAACTCTGGGACGCCCTAGTTCCTGAGACTG
GGTCCGGATTAGAGGGTTTCCGAGTTCTTTATTTTCGAACTAGAAATCGA
TTTTTAGAGAAGCGCGAGTCTTGACTCGGCCGTTCATCTTGCTTTTTTCT
AGAAATCGTCTCTATTTCTGTTTTTAGAGCGGGCGAGCACTCTTTTTTGT
AATCAAAAACTCTGGAGCTTCTCTAGAAACATGCGCCGGGCGTGCACTCT
AGAAAAGCCTTGTGCGCGTGACACGAGCGCAATCTGGTGCCATGTAAGCA
TAGGGGAGGTTGTAGTACTGTCGGCAAGGCTATCCAGTACGGCTGACGCG
AGGTTGGCGTGTGCAGTGAGCACACGGTGTGCGTTCAGCCGCTCCTTTGA
TGCGGTGACTCACGACTCACGCATGGGGGCCACGCAGGCCTGCACCGTGT
TGTTTGCGCGTGAGATGCAGCAAGCGGTTGTCAGCTTCATTGTGGAACGT
CATGCTGTCTTGTGCACCGTGACTCCCATCCCGCTCGCGCACGGCTGCAC
GCAATCAGCCTGATGGCTTTTCTTGAGAGAAGAGAACACGGTGTGTCACA
CGAAGCAGCCGCCTGACAGTACAGTCGATTGCGCACACGACAGAGCAAGC
CATACTCACGATGCCCTCTGGCCGATAAGTGGATAGGACACATGCGTCTA
GTGGCTGCGCGGCAGCGACCTCTGTTCATTCAAACGATTTCGCGTGAACC
CTACATGCTGGTAGCTGATGCTACATGGCTTCTCTTCACGCTCACGCATC
ATGTGTTGTCTGGCAGAATGAGTACTACTCACGCCTGCACGCGCCTGACG
CTTGCTTGCCCGCCTACTACGTCGCGCGTGGTAGTGGAGCTCGCTAAGGC
CTCTTCGCTGAGTTTTCTAACTCTTACGAAATTTCAGCAAAGACTCATCG
AAAACTCGGACTTTTCGAGTCGCGCGAGTTTCTATTTTTTGCTCTAGAGT
ATCCGGAGACCCCCTACTATGGAACTGTAATCTGATATTGTCCACGTGTG
GTGATTTTGACCCTACAACACAACAAAGATTATGCATATCTGGCGCATTC
GCAGTGTTCAGTATTTCTCACTTGCCTCTCCATAACTATTCTGACACGTC
AACACCGAGATCTTCCCTTGAAGTGCCCGGTGCACGTTTCTTCAAGTAAT
CACATGAGGCATGTGCTGCTCGCGGTGTGTTGCCCCTCAGAAACTCACTA
CTCATCCCGGGGCTGGCTTCAGAAGAACACTTGAAGTACCCACTTGAAGT
ATGCAAATCATTGCTGCGACGCCCCTCAGGAGCGCGCTGTTAGTGCCGGG
GCTGGCCGCGGAGGTGGCGTGAATCGCAGACCTGAAGTAATCACTTGAAC
TTTGCATGTCATGGCTGTGACGCCCTCAGGAGCGCGCTGTTTGTGACGCA
ACTGGCCGCGGAATATGTGGTAACTATATACACTTGAAGTACTCACTTGA
AGTTGAATTTCTGCTGTGACGCTCCTCAGGAGTGCGCTGTTCGTGCCGGG
CCTGGCTGCAGAAGTGGCGTCAGTGTCCATCTCTCCGGATTTGGCGCAGC
TCACTGTGTTTTGGGCATTCAGCGAGGAGCCACAGGTGCGTTTGAATACC
TGATGCCGGGCATTATACTGTGACGCGTCTTACACAAGTGTTGGTGGACA
TGTACTTCTCACACCTCATATTACTGCAATCATTGACTTTGAAGTTGAGC
ACCTTCAAATTTGATGCTCCACACAAAGCGCGGCAACAAAATGCCTGGTC
ACTTTGTGCATTCAACTCATTACACATTGACGAAGTCTGCCATTTGATTG
TCATGTAAGGGCACGTATTCTACAGTATCATGTGTCCAAGCATGAGGCAC
AGTTACAGCACCTTAGCAACATCACCCGTTCATTTGTTTCAGGCAAACAT
CGAGCTCATGGCAGCAGCAATGCGCGCAGTGATGCGTTTTTTTTCTTCAA
CAACGGGGAGCCGGAAGGCCGCTCAGTGACGATTTCTTCTTTTGGGGCAC
ATTGTGGCACCGATCGTATTAAATGTATAACTGCATTGCAAGTACCATCG
CTACGGAGTTTTCGAGGCTCTCAGTCACCCAGTGTGTATGCTTTGCAAGC
TCCTGCTGCAGACATTCAGTAAGCGCCATAAGACGCATATAACAGGCATT
CAGTTCCCCACTCTTGCACAAGAAGGCACACAAGTGGCACACACCTTGAA
TCACACCATGCCAGGAAAGATCACCATACCCTACTGCTGACATCAGCAGT
TTCTCGCAACTTGCTCGTTGTTGCTAATGAGCAGGCTGATCAATACAATG
AGCATGCTCCATTGTCAACTGTAGTGGCTGGTTTCTCCACCTTTTTGTTT
CGCCTCTTGTCCTTTTGCTGAGATTTGGGCAGTAGCATTGCGTTGATGAC
ATTGTCGTTGTTTTTCCAGCGCTAAAAACCCTTAGGGTTAGGGGTAGGGT
TAGGGTTAGTAGGGCTTCCGTACTGTCCGTGATGAACCACTCTGCTGTCG
CAGCAGCTGACAGCTAGTCTTCTACGGCCTAGTCATTCTTTCAACTTTGA
ATTGAAAGTACTCAGACTACTACTCTGAAGTATTGTGTTGCTCGCGTGCA
TCTCAGGAATGCAGTTTGACCTCGCAGGAGCTGATTGATGAAGCGCGGGT
GTCTTCTCACTCATTCTTTGCGCTTTCGTAAGTGTGCGCCTCAGGAACCT
GTGCGGATGCATGCAGCTCGGTGCTGACGCATGCTGCATAGTCGCGCTCT
TGCCGTCCCTGGCGCTTTTGTGATGTGTGCACCTCAAGAACCTGTCATCA
CGACGTCTCTCGCCCCCATCCTTGGGAGAAAACGGAGGGTCCGTCTTGAA
CTCTTACTGCATTTTTCTCTCAACTTCATGTTCATCCCAGGAACCCGTGA
CAGCCGCCGTCGCCACGACTGATGAAGCTCGGTTGTCTTCTCACTCATTC
TTTGCGCCTTTGGGATGTGCACCTCACAAACCTGCGCTGACTAACGCAGC
CCAGTTGTGCTCTTGCGCTTTTGTTATGTCTTACAATAAATAAATACTCT
CAACGTCTGTTGCGTTTTACTCTCGATTTTTTGTTCACCTCAGGAACCTG
TTACGGCAGCTGTCGCCACCATGCTGAAGTCTGCCACCCCCGCCACGCTA
CCCGCGATTGAAGCGCGGCTCATCAAGATGGTCAGTTACTTGGACTTTGT
ATCTTGAAGTATGCATCTTGAAGTATGTCGTTCGGCTGCAGCAGACCTCT
TGCCACGCCTGGTTTCAGACGCATCAGCCTCCGGCTTATCAAGGTGGCAA
GATGCAATTTTTACATCTCATCGGCCTGCAACTATTGTAATCACGCATGG
GTGCAAGATTGCACTATTGAACAAGGTGCCGCCAATACATAGGTCAGGTT
CTTTGGTATTTCAATTGACTGAAAAAGTGTCGTTACACTCAGCATAACAT
ACTTTCAGCACACAATTAGACTGGCTTTGCTACAAGAACTTGACTTGTGT
GTGCTTAACACACCTTTCGCCTACACGTCGGTTGTATGCCACCAGTAAGC
CGCCACCGGGTGCCCTGCACCGAGCTCTGTCCAATGCACATAGTTTCACA
ATCAAGATAAAATTTGAGTACTCCAAAATCATTCATAAAATAAGTCAATG
ACCTCTTCGTAAATCACCCAAATGCTCATATTTCTAAAGTCAAGAACGGC
TTGGAGTACCTCAATGTCACTATTCGATGAATTCTTTTGTGAAATTACGT
TTCAGGTGGGGCAACGACTCGCAGCACAGGCGCGATACCTGCGCGCTACG
CTGGCAATATGCAAAGATTCTGAGTACCCAGAATCACTGATTGATATTTG
AACTTTTGCTTGAAAACAATACGATTCAGGTGGAGCAACGGCTCGCGGCG
CAGGCAGGGTACCTGCGCGCCACGCTGGCAACGCGTGTCAACTCCAAGAA
AGTTCCGCAGGTCCTCTTCCGTCACTTTGCTGAGTCGGACCCGGTGGTGC
GCGCCGCATACAAAAGCTACAGTTACGAAACGGCTATCGCGCGGAAGGGG
CAGCGGCGGTCGCGGCGGCGCGCGAGGGGGGGCGCGGAGGAGGGGCAGGG
GGACAAACGGCCGCTCAGAGACAACATCCCCCTTCCGCGCATTCGGCTCT
CTTCGCGGCACTAA

Coding sequence (CDS) from alignment at Contig_48:651465..659778-

>mRNA_12624 ID=mRNA_12624|Name=jgi.p|Trimin1|349767|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1065bp|location=Sequence derived from alignment at Contig_48:651465..659778- (Tribonema minus UTEX_B_3156 )
ATGGTCATCTCCAGCTGTGTCGCGTGCACTCTCGCCGCCATACATGGGCA
CTTCGAGGTGCTGCGGTGGCTGCATGCCAATGAGTGTCCGTGGGACGAGG
GCACCTGCTGCGGCGCTGCCACTAGAGGGGACCTCGAGGTGCTGCAGTGG
GCACGCGCAAATGGGTGCCCCTGGGACAGCGGCACCTGCAGCGGCGCTGC
CCGCAGCGGCAACCTGGAGATGCTGCAGTGGGCCCGCGAACACGGATGTC
TGTGGGACGAGGATACCTGTGCCGAGGCTGCAGAGCAAGGTCATCTCGAG
CGCGGGCATCAGGAGGTGCTGGAGTGGGCGCGTGCATGGATGCCCCGAGA
CGACGGACTGTCGGCTGCCGTGAGGAAAGGCCTCGAAGAGCTCGGCAAGG
TGGCATCGTCGCGCCAGGCGTACTCAGAGCGGCCGCTAGCAGAGGCACGC
AGCGCGCGCTGGTCCAAGAGCACGCGGCAGCTGGTGAAGGAAGAGCAGTA
CATTGACGCCATCTCGCAGATCTTCGATGACGAGCTGGACGGCGGCTCGA
GCGCGCTGTTAGTGCCGGGGCTGGCCGCGGAGGTGGCGAGTGCGCTGTTC
GTGCCGGGCCTGGCTGCAGAAGTGGCGTCAGTGTCCATCTCTCCGGATTT
GGCGCAGCTCACTGTGTTTTGGGCATTCAGCGAGGAGCCACAGGAACCTG
TTACGGCAGCTGTCGCCACCATGCTGAAGTCTGCCACCCCCGCCACGCTA
CCCGCGATTGAAGCGCGGCTCATCAAGATGGTGGAGCAACGGCTCGCGGC
GCAGGCAGGGTACCTGCGCGCCACGCTGGCAACGCGTGTCAACTCCAAGA
AAGTTCCGCAGGTCCTCTTCCGTCACTTTGCTGAGTCGGACCCGGTGGTG
CGCGCCGCATACAAAAGCTACAGTTACGAAACGGCTATCGCGCGGAAGGG
GCAGCGGCGGTCGCGGCGGCGCGCGAGGGGGGGCGCGGAGGAGGGGCAGG
GGGACAAACGGCCGCTCAGAGACAACATCCCCCTTCCGCGCATTCGGCTC
TCTTCGCGGCACTAA