Trimin1|349767|estExt_Genemark1.C_Ctg_480066 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349767
Unique NameTrimin1|349767|estExt_Genemark1.C_Ctg_480066
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length355
Homology
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BLAST of jgi.p|Trimin1|349767 vs. uniprot
Match: A0A835YRX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX9_9STRA)

HSP 1 Score: 498 bits (1283), Expect = 7.450e-175
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0 
Query:    1 MVISSCVACTLAAIHGHFEVLRWLHANECPWDEGTCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGHQEVLEWARAWMPRDDGLSAAVRKGLEELGKVASSRQAYSERPLAEARSARWSKSTRQLVKEEQYIDAISQIFDDELDGGSSALLVPGLAAEVASXXXXXXXXXXXXXXXXXXXXAQLTVFWAFSEEPQEPVTAAVATMLKSATPATLPAIEARLIKMVEQRLAAQAGYLRATLATRVNSKKVPQVLFRHFAESDPVVRAAYKSYSYETAIARKGQRRSRRRARGGAEEGQGDKRPLRDNIPLPRIRLSSRH 354
            MVISSCVACTLAAIHGHFEVLRWLHANECPWDEGTCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGHQEVLEWARAWMPRDDGLSAAVRKGLEELGKVASSRQAYSERPLAEARSARWSKSTRQLVKEEQYIDAISQIFDDELDGGSSALLVPGLAAEVASXXXXXXXXXXXXXXXXXXXXAQLTVFWAFSEEPQEPVTAAVATMLKSATPATLPAIEARLIKMVEQRLAAQAGYLRATLATRVNSKKVPQVLFRHFAESDPVVRAAYKSYSYETAIARKGQRRSRRRARGGAEEGQGDKRPLRDNIPLPRIRLSSRH
Sbjct:    1 MVISSCVACTLAAIHGHFEVLRWLHANECPWDEGTCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGHQEVLEWARAWMPRDDGLSAAVRKGLEELGKVASSRQAYSERPLAEARSARWSKSTRQLVKEEQYIDAISQIFDDELDGGSSALLVPGLAAEVASXXXXXXXXXXXXXXXXXXXXAQLTVFWAFSEEPQEPVTAAVATMLKSATPATLPAIEARLIKMVEQRLAAQAGYLRATLATRVNSKKVPQVLFRHFAESDPVVRAAYKSYSYETAIARKGQRRSRRRARGGAEEGQGDKRPLRDNIPLPRIRLSSRH 354
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349767 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YRX9_9STRA7.450e-175100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..109
e-value: 3.1E-5
score: 25.7
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 154..296
e-value: 6.4E-8
score: 34.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..354
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 8..119
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 8..119
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 8..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_48contigContig_48:651465..659778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349767mRNA_12624Tribonema minus UTEX_B_3156 mRNAContig_48 651465..659778 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349767|estExt_Genemark1.C_Ctg_480066 ID=Trimin1|349767|estExt_Genemark1.C_Ctg_480066|Name=jgi.p|Trimin1|349767|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=355bp
MVISSCVACTLAAIHGHFEVLRWLHANECPWDEGTCCGAATRGDLEVLQW
ARANGCPWDSGTCSGAARSGNLEMLQWAREHGCLWDEDTCAEAAEQGHLE
RGHQEVLEWARAWMPRDDGLSAAVRKGLEELGKVASSRQAYSERPLAEAR
SARWSKSTRQLVKEEQYIDAISQIFDDELDGGSSALLVPGLAAEVASALF
VPGLAAEVASVSISPDLAQLTVFWAFSEEPQEPVTAAVATMLKSATPATL
PAIEARLIKMVEQRLAAQAGYLRATLATRVNSKKVPQVLFRHFAESDPVV
RAAYKSYSYETAIARKGQRRSRRRARGGAEEGQGDKRPLRDNIPLPRIRL
SSRH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR015946KH_dom-like_a/b