Trimin1|349675|estExt_Genemark1.C_Ctg_470021 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349675
Unique NameTrimin1|349675|estExt_Genemark1.C_Ctg_470021
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length440
Homology
BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A835YRI5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI5_9STRA)

HSP 1 Score: 844 bits (2180), Expect = 1.240e-308
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0
Query:    1 MRLVAAAATAAALASXXXXXXAGARALLCTQHWFALGSCAFALSDGECPRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESAGQELCVAATXXXXXXXXXXXXXXXXXXXXXXVEELIRGSLEGPRLYSTYSIRMRRRTPIPQGDGEEAAASASTNGAPVWSPAMFAIADDMAHPPCNTAAVWSSDAADGAGSSDIS 439
            MRLVAAAATAAALASXXXXXXAGARALLCTQHWFALGSCAFALSDGECPRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESAGQELCVAATXXXXXXXXXXXXXXXXXXXXXXVEELIRGSLEGPRLYSTYSIRMRRRTPIPQGDGEEAAASASTNGAPVWSPAMFAIADDMAHPPCNTAAVWSSDAADGAGSSDIS
Sbjct:    1 MRLVAAAATAAALASXXXXXXAGARALLCTQHWFALGSCAFALSDGECPRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESAGQELCVAATXXXXXXXXXXXXXXXXXXXXXXVEELIRGSLEGPRLYSTYSIRMRRRTPIPQGDGEEAAASASTNGAPVWSPAMFAIADDMAHPPCNTAAVWSSDAADGAGSSDIS 439          
BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A835YS33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS33_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.820e-94
Identity = 141/168 (83.93%), Postives = 145/168 (86.31%), Query Frame = 0
Query:   49 PRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHM 216
            PRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSV             F + D  LL  LA+ AARNG V VL ++
Sbjct:   70 PRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVXXXXXXXXXXXXXFWDKDTGLLISLAEWAARNGGVAVLDYV 237          
BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A835YIL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIL7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.470e-30
Identity = 97/308 (31.49%), Postives = 139/308 (45.13%), Query Frame = 0
Query:   52 WLHIAGVCPAWRDVYWS----QFESKR-----TSYNRAAESISRLALSWPPLEVSKW---GY----VLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHV--LDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEF--------RRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESAGQELCVAAT 333
            W + AGVC  W + Y      QF ++R     T++  A+ S+S L L       +++    Y    +LW AIG +G + + EWA          PS      +ITD    G  L +      R A+  +      L  A     L V  WA  H   +   R +  +A+ A   G +  +  ++A+LG  +         RR LC     L   A +  +L VL WL EH  L     R    AC +AA   D+P+VIAWLR  G+GWGSD+C  AA+ GH+ VLKWL+   CP W +   + C+  T
Sbjct:  505 WRYTAGVCKTWLEEYQCESLRQFLTRRRGIKVTTFACASASLSCLKLFHSDSRTAEYFSMSYEEYPLLWRAIGAQGDISIAEWAFSNLSRPTSQPSESDSESSITDDY--GDHLDMRP----REAMPHF------LKGAAGAGKLAVLDWACTHGVLHLIPRCVRAVAEGATTGGSLDAIKWLHAQLGSSDAALRQVTVNRRGLCE----LDLRAAQAGRLDVLMWLKEHGLLMEAQRREASKACSKAAAGCDDPNVIAWLRAEGYGWGSDICYAAAKPGHVEVLKWLQSNSCPDWANVEDKFCIDIT 796          
BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A835YKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.530e-20
Identity = 68/230 (29.57%), Postives = 104/230 (45.22%), Query Frame = 0
Query:   91 WPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLL-QWAFDRGA---LSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGG--DEFRRKLCHPG--CWLH-EPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLK 311
            W  L+ +K+    W AIG  G + + EW+++  C +   P       TD  + G+      ++++D       + +  T   +  A     L +  WA               +A  A   G +  +  ++ +LG   D FR+   +    C L    A  GC L +L+WL EH  L     R   +AC  AA   ++P+VIAWLR  G+GWGSD+C  AA +GHL VLK
Sbjct:   10 WQSLQPAKF----WHAIGARGDISIAEWSMENLCLSAEQP-------TDSESAGQPTEFEPEYSYDSDEELDWTPHETTPPFMKGAARAGKLAMLDWACTQGILRWTPHCARAVADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRSGVCELDLRAAGVGC-LDILKWLKEHGLLMDPQHREESEACSNAAAGCNDPNVIAWLRAEGYGWGSDICYNAAMQGHLEVLK 227          
BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A150GTK9_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GTK9_GONPE)

HSP 1 Score: 64.7 bits (156), Expect = 1.530e-7
Identity = 61/192 (31.77%), Postives = 82/192 (42.71%), Query Frame = 0
Query:  134 LDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRG-LPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESA 324
            LD I + AAR   L +L+     G    + +    +A A +  G LPV +WA E    + +  LL R A        +  L      L GDE           +   A    QL VLEW V+    P R+      A  EAA A    +V+AWLR+  + WGSD    AA  G    L+WL +  CP  ES+
Sbjct:  321 LDTI-EAAARLGHLEVLKKLRQIG----FGLAAAAIARAAAEGGQLPVLVWAVEELGASVEDPLLIRQAVKRCDLEALRWLRQRGCPLDGDEE----------VALAAAGSGQLPVLEWYVQELRGPVRSG-----AALEAAAATGRVEVLAWLRQRFWPWGSDTWVNAAGAGCEVALEWLAERGCPMPESS 492          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349675 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YRI5_9STRA1.240e-308100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YS33_9STRA1.820e-9483.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIL7_9STRA1.470e-3031.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKC7_9STRA1.530e-2029.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A150GTK9_GONPE1.530e-731.77Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 189..353
e-value: 1.1E-6
score: 29.5
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 110..347
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 273..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:149563..155254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349675mRNA_6192Tribonema minus UTEX_B_3156 mRNAContig_47 149563..155464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349675|estExt_Genemark1.C_Ctg_470021 ID=Trimin1|349675|estExt_Genemark1.C_Ctg_470021|Name=jgi.p|Trimin1|349675|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=440bp
MRLVAAAATAAALASGTAAATAGARALLCTQHWFALGSCAFALSDGECPR
DWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWG
YVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLL
QWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARL
AQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLE
WLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTR
AAERGHLNVLKWLRDTRCPAWESAGQELCVAATHGTVEVLEWLRAAGKGR
WDNAGVEELIRGSLEGPRLYSTYSIRMRRRTPIPQGDGEEAAASASTNGA
PVWSPAMFAIADDMAHPPCNTAAVWSSDAADGAGSSDIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf