mRNA_6192 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349675
Unique Name	mRNA_6192
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A835YRI5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI5_9STRA)

HSP 1 Score: 835 bits (2157), Expect = 6.460e-304
Identity = 433/439 (98.63%), Postives = 433/439 (98.63%), Query Frame = 1

Query:  211 MRLVAAAATXXXXXXXXXXXXAGARALLCTQHWFALGSCAFALSDGECPRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESAGQELCVAATXXXXXXXXXXXXXXXXXXXXXXVEELIRGSLEGPRLYSTYSIRMRRRTPIPQGDGEEAAASASTNGAPVWSPAMFAIADDMAHPPCNTAAVWSSDAADGAGSSDIS 1527
            MRLVAAAAT      XXXXXXAGARALLCTQHWFALGSCAFALSDGECPRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESAGQELCVAATXXXXXXXXXXXXXXXXXXXXXXVEELIRGSLEGPRLYSTYSIRMRRRTPIPQGDGEEAAASASTNGAPVWSPAMFAIADDMAHPPCNTAAVWSSDAADGAGSSDIS
Sbjct:    1 MRLVAAAATAAALASXXXXXXAGARALLCTQHWFALGSCAFALSDGECPRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESAGQELCVAATXXXXXXXXXXXXXXXXXXXXXXVEELIRGSLEGPRLYSTYSIRMRRRTPIPQGDGEEAAASASTNGAPVWSPAMFAIADDMAHPPCNTAAVWSSDAADGAGSSDIS 439

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BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A835YS33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS33_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.570e-93
Identity = 141/168 (83.93%), Postives = 145/168 (86.31%), Query Frame = 1

Query:  355 PRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHM 858
            PRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSV             F + D  LL  LA+ AARNG V VL ++
Sbjct:   70 PRDWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVXXXXXXXXXXXXXFWDKDTGLLISLAEWAARNGGVAVLDYV 237

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BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A835YIL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIL7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.590e-30
Identity = 97/308 (31.49%), Postives = 139/308 (45.13%), Query Frame = 1

Query:  364 WLHIAGVCPAWRDVYWS----QFESKR-----TSYNRAAESISRLALSWPPLEVSKW---GY----VLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHV--LDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEF--------RRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESAGQELCVAAT 1209
            W + AGVC  W + Y      QF ++R     T++  A+ S+S L L       +++    Y    +LW AIG +G + + EWA          PS      +ITD    G  L +      R A+  +      L  A     L V  WA  H   +   R +  +A+ A   G +  +  ++A+LG  +         RR LC     L   A +  +L VL WL EH  L     R    AC +AA   D+P+VIAWLR  G+GWGSD+C  AA+ GH+ VLKWL+   CP W +   + C+  T
Sbjct:  505 WRYTAGVCKTWLEEYQCESLRQFLTRRRGIKVTTFACASASLSCLKLFHSDSRTAEYFSMSYEEYPLLWRAIGAQGDISIAEWAFSNLSRPTSQPSESDSESSITDDY--GDHLDMRP----REAMPHF------LKGAAGAGKLAVLDWACTHGVLHLIPRCVRAVAEGATTGGSLDAIKWLHAQLGSSDAALRQVTVNRRGLCE----LDLRAAQAGRLDVLMWLKEHGLLMEAQRREASKACSKAAAGCDDPNVIAWLRAEGYGWGSDICYAAAKPGHVEVLKWLQSNSCPDWANVEDKFCIDIT 796

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BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A835YKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.580e-20
Identity = 68/230 (29.57%), Postives = 104/230 (45.22%), Query Frame = 1

Query:  481 WPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLL-QWAFDRGA---LSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGG--DEFRRKLCHPG--CWLH-EPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLK 1143
            W  L+ +K+    W AIG  G + + EW+++  C +   P       TD  + G+      ++++D       + +  T   +  A     L +  WA               +A  A   G +  +  ++ +LG   D FR+   +    C L    A  GC L +L+WL EH  L     R   +AC  AA   ++P+VIAWLR  G+GWGSD+C  AA +GHL VLK
Sbjct:   10 WQSLQPAKF----WHAIGARGDISIAEWSMENLCLSAEQP-------TDSESAGQPTEFEPEYSYDSDEELDWTPHETTPPFMKGAARAGKLAMLDWACTQGILRWTPHCARAVADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRSGVCELDLRAAGVGC-LDILKWLKEHGLLMDPQHREESEACSNAAAGCNDPNVIAWLRAEGYGWGSDICYNAAMQGHLEVLK 227

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BLAST of jgi.p|Trimin1|349675 vs. uniprot
Match: A0A150GTK9_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GTK9_GONPE)

HSP 1 Score: 64.7 bits (156), Expect = 2.080e-7
Identity = 61/192 (31.77%), Postives = 82/192 (42.71%), Query Frame = 1

Query:  610 LDNITDGAARGRRLPLLQWAFDRGALSQYHMTNIMLAHATSVRG-LPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLKWLRDTRCPAWESA 1182
            LD I + AAR   L +L+     G    + +    +A A +  G LPV +WA E    + +  LL R A        +  L      L GDE           +   A    QL VLEW V+    P R+      A  EAA A    +V+AWLR+  + WGSD    AA  G    L+WL +  CP  ES+
Sbjct:  321 LDTI-EAAARLGHLEVLKKLRQIG----FGLAAAAIARAAAEGGQLPVLVWAVEELGASVEDPLLIRQAVKRCDLEALRWLRQRGCPLDGDEE----------VALAAAGSGQLPVLEWYVQELRGPVRSG-----AALEAAAATGRVEVLAWLRQRFWPWGSDTWVNAAGAGCEVALEWLAERGCPMPESS 492

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349675 vs. uniprot

BLAST of jgi.p|Trimin1|349675 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A835YRI5_9STRA	6.460e-304	98.63	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YS33_9STRA	1.570e-93	83.93	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YIL7_9STRA	4.590e-30	31.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YKC7_9STRA	2.580e-20	29.57	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A150GTK9_GONPE	2.080e-7	31.77	Uncharacterized protein n=1 Tax=Gonium pectorale T...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_47	contig	Contig_47:149563..155464 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349675\|estExt_Genemark1.C_Ctg_470021
Description	Ankyrin repeats (3 copies)
COG category	S
Max annot lvl	4776\|Peronosporales
EggNOG OGs	COG0666@1\|root,KOG0504@2759\|Eukaryota,3QESJ@4776\|Peronosporales
Evalue	6.35e-06
Seed ortholog	164328.Phyra74268
Hectar predicted targeting category	signal peptide
TranscriptId	349997
Track	FilteredModels1
ProteinId	349675

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349675	gene_6192	Tribonema minus UTEX_B_3156	gene	Contig_47 149563..155464 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349675	Trimin1\|349675\|estExt_Genemark1.C_Ctg_470021	Tribonema minus UTEX_B_3156	polypeptide	Contig_47 149563..155254 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6192_6	exon_6192_6	Tribonema minus UTEX_B_3156	exon	Contig_47 149563..149633 -
exon_6192_5	exon_6192_5	Tribonema minus UTEX_B_3156	exon	Contig_47 150195..150201 -
exon_6192_4	exon_6192_4	Tribonema minus UTEX_B_3156	exon	Contig_47 151381..151467 -
exon_6192_3	exon_6192_3	Tribonema minus UTEX_B_3156	exon	Contig_47 151666..152079 -
exon_6192_2	exon_6192_2	Tribonema minus UTEX_B_3156	exon	Contig_47 152428..153026 -
exon_6192_1	exon_6192_1	Tribonema minus UTEX_B_3156	exon	Contig_47 155113..155464 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6192	CDS_6192	Tribonema minus UTEX_B_3156	CDS	Contig_47 155113..155254 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_6192	UTR5_6192	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_47 155255..155464 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_47:149563..155464-
coding sequence from alignment at Contig_47:149563..155464-

spliced messenger RNA

>mRNA_6192 ID=mRNA_6192|Name=jgi.p|Trimin1|349675|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1530bp|location=Sequence derived from alignment at Contig_47:149563..155464- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCAGGCATGCACATGGGGGAGGACGCAGGGTACTGCGCTGCGTATGGGGA
GTTTCCGGACTTCACGTTCGAAGAGGATGAGAAGAGCAACTCGATGCTGT
TCCAGTTCCTGGCGCAGTCCTGAGGGTCAATGTGCGCTACGCGCAAGCAG
CAGCCGCGCCCGCAGCGGTGACCATCATTGCGATCGTTGGCACGAGTGGT
GCGACGACGCATGAGACTAGTTGCTGCTGCGGCCACGGCAGCAGCACTCG
CGTCAGGCACGGCGGCAGCAACGGCGGGCGCCAGAGCGCTGCTGTGCACG
CAGCACTGGTTCGCCCTCGGTTCGTGCGCGTTTGCGCTGAGCGATGGGGA
ATGCCCTCGAGACTGGCTGCACATCGCCGGCGTTTGCCCTGCCTGGCGCG
ACGTGTACTGGAGCCAGTTTGAATCGAAGCGAACCAGCTACAACCGCGCA
GCAGAGTCAATCTCGCGCCTGGCACTCAGCTGGCCCCCTCTTGAAGTGTC
CAAGTGGGGCTATGTGCTATGGCCTGCTATAGGGGAGGAAGGGCACGTGC
CTGTAGTGGAGTGGGCAATCCAGACGTACTGCCCCAATGGCGTCGCCCCG
AGTCATGTCCTGGACAACATCACAGACGGCGCGGCACGCGGGCGGCGCCT
GCCGCTGCTGCAGTGGGCCTTTGATCGCGGCGCTCTCAGCCAGTACCACA
TGACCAACATAATGCTTGCGCATGCCACGAGCGTGCGCGGGCTGCCCGTG
TTCCTGTGGGCATGGGAGCACAAGTTCTGCAATGGAGATGCGCGCCTTCT
GGCACGCCTTGCACAGTCAGCGGCGCGCAATGGCTGCGTTGGCGTTTTGG
CGCACATGTATGCACGGCTCGGCGGCGATGAGTTCAGGCGCAAGCTGTGT
CACCCGGGGTGCTGGCTGCATGAGCCAGCAGTGGAAGGCTGTCAGTTGCA
GGTCTTGGAGTGGCTTGTAGAGCACGATGCGCTGCCGCCTCGCAACGCAA
GACCACGCATCGACGCTTGTGAGGAAGCAGCGTTAGCCGCGGACAATCCT
GACGTCATCGCCTGGCTGCGTGAAGCCGGCTTTGGCTGGGGCTCAGACGT
GTGCACACGTGCCGCCGAAAGAGGCCATCTCAACGTGCTCAAGTGGTTGC
GCGATACGCGGTGCCCGGCGTGGGAGAGCGCGGGCCAGGAGCTGTGCGTT
GCGGCGACGCATGGCACAGTTGAAGTTTTGGAGTGGCTCAGGGCGGCGGG
CAAGGGGAGGTGGGACAACGCAGGGGTGGAGGAGCTCATACGGGGGAGCT
TGGAGGGGCCGCGACTCTACAGCACATACAGCATACGCATGAGGCGCAGG
ACTCCGATACCACAGGGGGATGGGGAGGAAGCAGCCGCATCAGCGTCCAC
CAATGGCGCACCCGTATGGAGCCCGGCAATGTTTGCAATCGCCGATGACA
TGGCGCACCCCCCCTGCAACACCGCAGCAGTTTGGTCCTCAGACGCCGCT
GATGGCGCGGGCAGCAGCGACATTAGCTGA

protein sequence of jgi.p|Trimin1|349675

>Trimin1|349675|estExt_Genemark1.C_Ctg_470021 ID=Trimin1|349675|estExt_Genemark1.C_Ctg_470021|Name=jgi.p|Trimin1|349675|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=440bp
MRLVAAAATAAALASGTAAATAGARALLCTQHWFALGSCAFALSDGECPR
DWLHIAGVCPAWRDVYWSQFESKRTSYNRAAESISRLALSWPPLEVSKWG
YVLWPAIGEEGHVPVVEWAIQTYCPNGVAPSHVLDNITDGAARGRRLPLL
QWAFDRGALSQYHMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARL
AQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLE
WLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTR
AAERGHLNVLKWLRDTRCPAWESAGQELCVAATHGTVEVLEWLRAAGKGR
WDNAGVEELIRGSLEGPRLYSTYSIRMRRRTPIPQGDGEEAAASASTNGA
PVWSPAMFAIADDMAHPPCNTAAVWSSDAADGAGSSDIS*

mRNA from alignment at Contig_47:149563..155464-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6192 ID=mRNA_6192|Name=jgi.p|Trimin1|349675|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5902bp|location=Sequence derived from alignment at Contig_47:149563..155464- (Tribonema minus UTEX_B_3156 )
GCAGGCATGCACATGGGGGAGGACGCAGGGTACTGCGCTGCGTATGGGGA
GTTTCCGGACTTCACGTTCGAAGAGGATGAGAAGAGCAACTCGATGCTGT
TCCAGTTCCTGGCGCAGTCCTGAGGGTCAATGTGCGCTACGCGCAAGCAG
CAGCCGCGCCCGCAGCGGTGACCATCATTGCGATCGTTGGCACGAGTGGT
GCGACGACGCATGAGACTAGTTGCTGCTGCGGCCACGGCAGCAGCACTCG
CGTCAGGCACGGCGGCAGCAACGGCGGGCGCCAGAGCGCTGCTGTGCACG
CAGCACTGGTTCGCCCTCGGTTCGTGCGCGTTTGCGCTGAGCGATGGGGA
ATGTGCTGCGCGTCCACGGTCAGTTGTTGCGCGCAGCATTGGAGTCACTA
TTCAGGTTCTGTGTACGGTGCGCTCATAGGTCGCGCTGAGTGCTTATTCG
CTGCACTATGTAAGCGCAAGCGCGGGCCCTCTGTGACATGCTCGTAAAGC
CGGTCACCGGCGCTTATAGCCTACCTGCCCCACAGCAATGCCCGCAGCAG
CATATACATAGTGGAACCCTCATCGGCGATTGATTTGTATCCTTGGAAGG
GGTCGGGCGGCACATGCGTCACCAGCCGGTTAGACGAGTGTTATTAGGCT
GTGTTGCCGTGTGACTTCACAATCAGGTATGACTACCAGCTTCGGGTTGC
GTGTGCGGGCTCCAGCGAAGGTGTGCACACAGGGGACTGATAGTTATTGC
GTGGTAGATCCGCTTCTCTTGACCACACGTGGCCGGGGTGTGCACTGAGG
TGCTGCCGCCGCCTGGCACACCTTGCAAGTGGTGCACATTCAATGGACTA
GCTGGGATACCGACTTGTCGCCCTGTATGACTTTTCTCGCATGTTGCTGT
CTGATGCATGCCGTGCATGCCTGGTTGCTTGACATCAGTGCATGTCTGAG
CTGGATGCAAATGGACGTTGTGCGCTTTATGTACTGGCTTCGTGCAGATT
AATCTGTTCTTGTACTTTTTATTAATTCTCGCTCAGGGCGCGAAAAAGCC
CAGATGATTGGCATCTAGCTGTAAGGAATCTACATGTCGTATGACAGTCT
GAAAGTGTCGCAACGACAACCACTCAAACGCCGCCGCCGCCAAATGGCAT
CTCGGGGTCCTCCCCTACTGTTCTTGTACTTTTTATTAATTCTCGCTCAG
GGCGCGAAAAAGCCCAGATGATTGGCATCTAGCTGTAAGGAATCTACATG
TCGTATGACAGTCTGAAAGTGTCGCAACGACAACCACTCAAACGCCGCCG
CCGCCAAATGGCATCTCGGGGTCCTCCCCTACGTCCTCCGTTCTTGTACT
TTTTATTAATTCTCGCTCAGGGCGCGAAAAAGCCCATGTACTTGTCAATG
CAACTGATGCCTTGCTGATGCGCCACTGGCGAGAATTGAGCTCATGTGCC
TGACTGTTGCAGTCCGATGGTGGCCGCAGCTTAGGCCTAGGGTTAGAAGA
AGACGACTTGCCACTGCCACAAGACTTGTGTACTTTTATTATATTGTGTT
TCTCTGCGGCATTTTGTGTTTGTGCTGCACATTGGATTCTGTCAGCTGCT
GCTGCTGCTAGGCGCCAATCTACTGTGTCATCATATTGCAATGAGCGCAT
CAAACATATCTGGGGATCCTTCCTGCATTCAGGTCACTGGTGCCATCCTA
CAAGCCAGCATGTGGCTTGCTGGTATGCTTGCAACTTTTTGTACCATTTG
CCATATCTACAGGCCTCGTATGCATTCATGATCGGGGATGCAAATCTACG
GCACATCGGTTTGGTCATACTCACAAACTGATTACGAGTATCATCAAGCT
GGGTCAATGGGAGCGCTTGTATGTCACAGTGACACCAGCACAAAGTTGCA
CCACAGTTCCCCGAACAACTTAAACAACCTTCGCAAAAAACGAAACTAGA
ACTTGTATCCGTGCACTTGTAAGATGGCCAGCTGTCAGCAGCCGGACGCG
GCCATGAATGAAACCTCTGAGGTCCGCAGTGCGCCTCGGGAGGTCGCTCG
ACCCTTCACGTCGGCATTGGTGCGTGCTTCGTATTTGATGATCTCTCATC
TGTCTGTGCCTTGCTGCTGGTGCTCTTGAGCTGACAGCGATCGAGTGCCG
CAGTAACTGGCGCTGGCATGAAGCTGTTGTAGACCCCGTCTTCTACTCGA
CGTGTGCCAATGCAGCGATAGGTCTCGCTCACTGTAACGAATAACTCAAA
ACACTCAAATGCCCTGCTTCATCGTGAGCAGGCCGCCGTTTTGTCTCCAG
AGGAGCAGGCGCTGCTGCTTGGCATCCCACTACCTCAGGCGCCTGCGGAT
CATCAACGGCGTCAACGGCATCAGCAGTCCCTCGGCGAACACCCGTTGTA
CAACCCAAACACTCTGGGCCTGCTCGTTCAACTGCTAGGCCCTCGAGACT
GGCTGCACATCGCCGGCGTTTGCCCTGCCTGGCGCGACGTGTACTGGAGC
CAGTTTGAATCGAAGCGAACCAGCTACAACCGCGCAGCAGAGTCAATCTC
GCGCCTGGCACTCAGCTGGCCCCCTCTTGAAGTGTCCAAGTGGGGCTATG
TGCTATGGCCTGCTATAGGGGAGGAAGGGCACGTGCCTGTAGTGGAGTGG
GCAATCCAGACGTACTGCCCCAATGGCGTCGCCCCGAGTCATGTCCTGGA
CAACATCACAGACGGCGCGGCACGCGGGCGGCGCCTGCCGCTGCTGCAGT
GGGCCTTTGATCGCGGCGCTCTCAGCCAGTACCACATGACCAACATAATG
CTTGCGCATGCCACGAGCGTGCGCGGGCTGCCCGTGTTCCTGTGGGCATG
GGAGCACAAGTTCTGCAATGGAGATGCGCGCCTTCTGGCACGCCTTGCAC
AGTCAGCGGCGCGCAATGGCTGCGTTGGCGTTTTGGCGCACATGTATGCA
CGGCTCGGCGGCGATGAGTTCAGGCGCAAGCTGTGTCACCCGGGGTGCTG
GCTGCATGAGCCAGCAGTGGAAGGCTGTCAGTTGCAGGTGAGCCGCACTG
CCTGCCACTGCTTGCCTTGGATGGATACTTTTGAGCGGGATGAGTGCCTG
CCAAGCCTCTCAGCCAGTCATTGGCAAAACGAGGGCCCTGCCATTCAAGG
CACTGTGAGGCAACGTAGAGAGCTGTTGCTCACTACCCTGTTGTTCCACA
CCGGCAGAGGAGACTTGCAGGCGACCAATGCAACAGAAGACCGACGCCAG
TCGTGTGCTGCTAGAAGTGAATATATTGTAGTCTGTCTAGAATACGTACT
TAGGGCTAACCCTTGGTAGTGAGCATGTAACTGCCATATGCTCCAACACT
GATACCTGCACACCCTGTTTCTTTCGCCGTGACAGGTCTTGGAGTGGCTT
GTAGAGCACGATGCGCTGCCGCCTCGCAACGCAAGACCACGCATCGACGC
TTGTGAGGAAGCAGCGTTAGCCGCGGACAATCCTGACGTCATCGCCTGGC
TGCGTGAAGCCGGCTTTGGCTGGGGCTCAGACGTGTGCACACGTGCCGCC
GAAAGAGGCCATCTCAACGTGCTCAAGTGGTTGCGCGATACGCGGTGCCC
GGCGTGGGAGAGCGCGGGCCAGGAGCTGTGCGTTGCGGCGACGCATGGCA
CAGTTGAAGTTTTGGAGTGGCTCAGGGCGGCGGGCAAGGGGAGGTGGGAC
AACGCAGGGGTGGAGGAGCTCATACGGGGGAGCTTGGAGGGGCCGCGACT
CTACAGCACATACAGCATACGCATGAGGCGCAGGACTCCGATACCACAGG
TGACTCAGTGGCTGAGAAGCCAGCTGATATCACCGCCACCACCCTCACCT
CTAGCAGAGTCTGAGGACGGATCCGCAGGGAGCAAGTCTGTGGCCGAATC
CGTAGGAGCGGGGGCCGAAGAATCCGAAAAATCTGAGGCCAAATCCGCAG
AATCTGATGCTGAATCCGCTGCGGCTTTGCTAGATGCTCCAGCCCAGGGG
GATGGGGAGGAAGCAGCCGCATCAGCGTCCACCAATGGCGCACCCGTATG
GAGCCCGGCAATGTTTGCAATCGCCGATGACATGGTCCGTCCTCATCCTA
CATGATGTGCGGTTCTCTCCCAGGCACTCACTCACTCCCTTGTAAATGTG
CACTGTTTATAATACGTGCGTGCGGCTGCCGACATGTGCATTGCATGTCC
GCATGGCATCAGCAAGGGGTGATTGAGGCCAGCAGGCAGCAGTAGCAGTA
GCAGGCGCCCTAGCTCTTGTCTTGTTGATTTGCCAGACGAGCACGCGAGC
GGCATGCCGCCCGCCACTTGTAATACATTCAGCTGTGTCAGCTCTGCATT
ATCTTGGTGTCAAGCTCCTTCCTCTCCTTGTAAGCGCTTTCATTCAATGC
ATTGCGCCCAGGTTGACGTGCCTTGATTGCCTTCCAGGTTTGACGTGATT
GATATGTGAGATACCCTTTGTATAGCCCCTTTGCCTGGCCCTATCAGTGT
GACATGGTTCCCCAATGTGCTGACACATCCAGCGGACAGTGCCTATCATG
ACCTTTTTGGCCACCTAGCCATGGCAGTCAGAAGAAATGTCAATGCACCA
GCAGCATGACGTCCCGATGGTCGCACAAAAATGTCAATGTACTTCCTCAT
GAAATGAATACCTCAATGAGTATCATAATGTTGACATTTGCCAAGTGATT
CACAGATGCAAGACTGCAGGTAAAGATTGTAGCACCTACGCCTGCAAATG
GCCACCCTTCGCATGAAAAAGTAGCTTGACTTGCTTTGTTCAAGAGCGGC
TAATTGCGTGTAGTGGTATTTCATTTGTACATTGGAGCGCGTCCATTTCA
TACAATTGCTTCTGTTTGCCACTCAATACTAATATTATTGAACATAACTT
CAATGGGAACACATGTTGATGCATGATAGAATAACTGATGATTAGGTTCA
ACCGCTTCAATGGAATGGCATGATGCAATGCATAGCATACCCAGGGCACT
TTGTCAACAGCCCACCACCGATTGAGGCACTGTAATGTTCTTCACGTTGT
GTTAGAGAAGAGGCCCAGACAGAGGCTGGTGTTGCCACCACTGCTGCAGC
TCGTGCTGCAGCCCCTTCCCTGCGTCACACCACCGTGGCTGTCTTCACAC
ATAGCTCATCAACTACCACTGCAGTTCCTGCTGCAATCTCCCCCCACTTG
CTGGCCTGTTGCACCCCTCAACAACATTTGACATCACATCTACCTCAACC
ATGTGCTGTGCAGGCGCACCGTAAGCGTACAGCACAGTGACTGATCTGAC
AGCGTATACAAGCTGTATCGCGATCTTCTAGATTGAGAACTAATGAAATT
TTTCTGCTTTGAAGCAGATGTATACAAGCAGTCTCAAACTGTAATCTAGA
AGCAGTACTGTGACCTGAGTAGTGTTTCAGTTTGAAGTTTGATTGTCTGA
GGGTCCCTAATTGCTGAGACATGGGGCCTTTTGGCCCATAGGAGGCCCAC
TGACTCGCAAGGAGACACCCCACTACCACGTCGTGTGCAACAGTATAAGG
AAAGGGCGCAGAAGCAACCCTGCTCAGCAAGTACTGATCCTAGGCAACAA
GCAGTGACACGACAGGCAACAACCAGTGACGCGGCACACATGCGTATGGA
TTTCAACTTGATCAAGACACGTGTATCTTTCAGGAGCATACATTCTCGCT
CAACAGGAACTTTGAGATGTCCCGATGCAGCATTGATGAAAAGCTGCTCA
CACAAATTGTCAGTGCTGGCATGGCATAGGCTCCTTGACTATTTCTGTCA
CCCATGCACCCCCCCCCCCCCCCCCCCCCAGCCCCCTGCAACACCGCAGC
AGTTTGGTCCTCAGACGCCGCTGATGGCGCGGGCAGCAGCGACATTAGCT
GA

Coding sequence (CDS) from alignment at Contig_47:149563..155464-

>mRNA_6192 ID=mRNA_6192|Name=jgi.p|Trimin1|349675|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1320bp|location=Sequence derived from alignment at Contig_47:149563..155464- (Tribonema minus UTEX_B_3156 )
ATGAGACTAGTTGCTGCTGCGGCCACGGCAGCAGCACTCGCGTCAGGCAC
GGCGGCAGCAACGGCGGGCGCCAGAGCGCTGCTGTGCACGCAGCACTGGT
TCGCCCTCGGTTCGTGCGCGTTTGCGCTGAGCGATGGGGAATGCCCTCGA
GACTGGCTGCACATCGCCGGCGTTTGCCCTGCCTGGCGCGACGTGTACTG
GAGCCAGTTTGAATCGAAGCGAACCAGCTACAACCGCGCAGCAGAGTCAA
TCTCGCGCCTGGCACTCAGCTGGCCCCCTCTTGAAGTGTCCAAGTGGGGC
TATGTGCTATGGCCTGCTATAGGGGAGGAAGGGCACGTGCCTGTAGTGGA
GTGGGCAATCCAGACGTACTGCCCCAATGGCGTCGCCCCGAGTCATGTCC
TGGACAACATCACAGACGGCGCGGCACGCGGGCGGCGCCTGCCGCTGCTG
CAGTGGGCCTTTGATCGCGGCGCTCTCAGCCAGTACCACATGACCAACAT
AATGCTTGCGCATGCCACGAGCGTGCGCGGGCTGCCCGTGTTCCTGTGGG
CATGGGAGCACAAGTTCTGCAATGGAGATGCGCGCCTTCTGGCACGCCTT
GCACAGTCAGCGGCGCGCAATGGCTGCGTTGGCGTTTTGGCGCACATGTA
TGCACGGCTCGGCGGCGATGAGTTCAGGCGCAAGCTGTGTCACCCGGGGT
GCTGGCTGCATGAGCCAGCAGTGGAAGGCTGTCAGTTGCAGGTCTTGGAG
TGGCTTGTAGAGCACGATGCGCTGCCGCCTCGCAACGCAAGACCACGCAT
CGACGCTTGTGAGGAAGCAGCGTTAGCCGCGGACAATCCTGACGTCATCG
CCTGGCTGCGTGAAGCCGGCTTTGGCTGGGGCTCAGACGTGTGCACACGT
GCCGCCGAAAGAGGCCATCTCAACGTGCTCAAGTGGTTGCGCGATACGCG
GTGCCCGGCGTGGGAGAGCGCGGGCCAGGAGCTGTGCGTTGCGGCGACGC
ATGGCACAGTTGAAGTTTTGGAGTGGCTCAGGGCGGCGGGCAAGGGGAGG
TGGGACAACGCAGGGGTGGAGGAGCTCATACGGGGGAGCTTGGAGGGGCC
GCGACTCTACAGCACATACAGCATACGCATGAGGCGCAGGACTCCGATAC
CACAGGGGGATGGGGAGGAAGCAGCCGCATCAGCGTCCACCAATGGCGCA
CCCGTATGGAGCCCGGCAATGTTTGCAATCGCCGATGACATGGCGCACCC
CCCCTGCAACACCGCAGCAGTTTGGTCCTCAGACGCCGCTGATGGCGCGG
GCAGCAGCGACATTAGCTGA