Trimin1|349666|estExt_Genemark1.C_Ctg_470007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349666
Unique NameTrimin1|349666|estExt_Genemark1.C_Ctg_470007
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length573
Homology
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: A0A835YRH5_9STRA (Paf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH5_9STRA)

HSP 1 Score: 940 bits (2429), Expect = 0.000e+0
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0
Query:    1 MATLQPMETDMASQLQPPXXXXXXXXXXXXXXXXXXXXXXXADGVPPDSSRHREESSKEKEDXXXXXXXXXXXXXXXXXXXXXXXXXKVLEQQKIQTARRKWQKDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVTGSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAEDQANRGPGMEVARRPPSDEEFQAMGEKVAKDLGVLAAKHMRRAAADAAAVSSRGAGEGVRGGRXXXXXXXXXXXXXXXXXXXXXSVMTEHLESEGSNVAVKGTDTSEGDEMSRVGMDDSDEDGLN 572
            MATLQPMETDMASQLQPPXXXXXXXXXXXXXXXXXXXXXXXADGVPPDSSRHREESSKEKEDXXXXXXXXXXXXXXXXXXXXXXXXXKVLEQQKIQTARRKWQKDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVTGSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAEDQANRGPGMEVARRPPSDEEFQAMGEKVAKDLGVLAAKHMRRAAADAAAVSSRGAGEGVRGGRXXXXXXXXXXXXXXXXXXXXXSVMTEHLESEGSNVAVKGTDTSEGDEMSRVGMDDSDEDGLN
Sbjct:    1 MATLQPMETDMASQLQPPXXXXXXXXXXXXXXXXXXXXXXXADGVPPDSSRHREESSKEKEDXXXXXXXXXXXXXXXXXXXXXXXXXKVLEQQKIQTARRKWQKDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVTGSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAEDQANRGPGMEVARRPPSDEEFQAMGEKVAKDLGVLAAKHMRRAAADAAAVSSRGAGEGVRGGRXXXXXXXXXXXXXXXXXXXXXSVMTEHLESEGSNVAVKGTDTSEGDEMSRVGMDDSDEDGLN 572          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: D7FXY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY8_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 4.060e-105
Identity = 220/514 (42.80%), Postives = 298/514 (57.98%), Query Frame = 0
Query:   89 VLEQQKIQTARRKWQKDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVH--ATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLR-KSDGDEFVTGSYMVPK----EAGEGGGGXSAEXXEKGAE---GGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLP-AEDQANRGPGMEVARRPPSDEEFQAMGEKVAKDLGVLAAKHMRRAAADAAAVSSRGAGEGV------------------------RGGRXXXXXXXXXXXXXXXXXXXXXSVMTEHLESEGSNVAVKGTDTSEGDEMSRVGMDDSD 567
            VLE QKI  ARRKWQK +EFLC +KFRN+LPDPPLGPHFL +PL +   V+Y PTTLE+ +KWKLH  RDLGV ID+ID R+Y +P K   L P+D  LL W + + G G+ + E+  S   +RK VDTSVTWLKKTVYLTNDPFD VH+F+S++Q Q D +  ++K++   +K DR   + +SF  ANS K LVH  A+ + LT EWVMPV+PD +LW NTYT V+FD DP  +E  + G   RKR+RA +A+V NV++   + +  E +TGSY++PK    + GEG   X   XX    +   G  G+ +VKDY+ N+ +Y   Q D          HL+F+I++ + +A+FC+LSA+V+LANLP  + Q   G G  V++R  S EE     +KV+ DL +    ++  A  D  +     AG                           R                        SV++  +ESE SNVAVKGT++SEGD       DD D
Sbjct:    5 VLEDQKINKARRKWQKQTEFLCTIKFRNSLPDPPLGPHFLDVPLDLQSYVKYKPTTLESDYKWKLHYERDLGVPIDVIDPRNYLLPKKAVPLPPEDEALLNWREGD-GPGSVKKED-LSTSARRKTVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEKEIARGKKQDRKMLIEESFLHANSNKPLVHQDASKRHLTAEWVMPVMPDVSLWPNTYTTVMFDKDPAADE-TVKGSEARKRKRAGEALVCNVKRTTFEGNSHEVITGSYLMPKGKATKKGEGXXXXXXXXXXXKMDVEDGSVGYDFVKDYKFNIVHYAQTQYDGNP-------HLLFVINKDTQEASFCKLSAKVELANLPRGQGQPATGRGAVVSKRSLSPEEVSNARKKVSADLQLEGEYYI--AGEDGLSNGGHAAGGDTGXXXXXXXXXXXXXXXXXENGHANRSEAGLNGHSDESRAWNGTSDVDRESVLSMTMESEASNVAVKGTESSEGDIAGAHTDDDED 506          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: A0A7S2D5H7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5H7_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.400e-36
Identity = 109/329 (33.13%), Postives = 163/329 (49.54%), Query Frame = 0
Query:   88 KVLEQQKIQTARRKWQ-KDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSY--SVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEA---NSKK-------KLVHAT--NKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVT-GSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQN 400
            +VL +Q    ARR+++ K   F+C++  RN LP+P  GP   ++P  +   V++ PT+L+T +KWK HC R LGV +D++D  ++     +K P LHP D  +L W + ++G G   A+E                WL  T + +ND    VHKF+S  QV  +  ER+ +          ++  L + AE    N++K       KLV A    K LT EWVMPVLPDA LW N + HV F++DP       A    RKR R    ++ N + +        VT GS+++P E G      SA   E+       F W + YQ+  ++
Sbjct:   27 RVLGEQAAADARRRFRSKIPHFVCNMPLRNRLPEPLPGPKLAQLPTDLQSFVEFNPTSLDTDYKWKHHCERTLGVSVDLVDLEAHRPQPKEKRPQLHPDDDRILNW-RGKQGGGGGRAKEHV--------------WLLNTSFTSNDLTQQVHKFKSGSQVMKEEHERIVQ----------INNALGTDAETLTENAEKSFDVPFDKLVEAAARRKGLTAEWVMPVLPDARLWANDFVHVDFEVDP-------APSNPRKRARVAGGMLVNAKPVYNEKQQTNVTKGSFILPMEEG------SAGEHEEQV-----FEWERQYQVETKD 312          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: A0A7S3YBK4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBK4_HETAK)

HSP 1 Score: 134 bits (337), Expect = 6.220e-33
Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 0
Query:   88 KVLEQQKIQTARRKWQKDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPD-KPPTLHPKDAELLQWDKVERG 196
            KVLE+QKIQ AR+KWQK++EFLC LKFRN LP+P LGP+ L IP  +D+L +Y P +L+  +KW+LHC RDLGV ID+ID   Y VP   PP + P D  LL+W + E G
Sbjct:   77 KVLEEQKIQKARKKWQKNTEFLCTLKFRNTLPEPHLGPNLLDIPFPIDELTEYRPNSLDVNYKWQLHCERDLGVPIDLIDPARYLVPPGTPPPMDPADRALLEWREEEEG 186          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: A0A3R7J8I8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8I8_9STRA)

HSP 1 Score: 142 bits (357), Expect = 7.840e-33
Identity = 107/364 (29.40%), Postives = 170/364 (46.70%), Query Frame = 0
Query:  104 KDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVTGSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAEDQANRGPGMEVARRPPSDEE 467
            K SEFL  L+FRN LPD P    F++ P   ++L++Y P +LE  + +++H   +LG+ ID+ID   Y  P+KP +L   D ++L   +   G               R +   +V+WL++T Y+ ND +DAVHKF+S+ ++Q   +E  +  + E            SF + N  K LVH  NK         V PD  L  N Y  + +DI P E+             R D+A++  V K  ++ G+E + GS ++P          S+E  E        FA++++Y M+V++    +  S         H VF++D  S + T+  L  R+ L       +  R  G  V RR  S+ E
Sbjct:   90 KQSEFLATLEFRNALPDIPFDTKFVQYPHEPERLIKYKPNSLEMDYTYEIHEEANLGLPIDLIDPAKYEAPEKPASLEVGDEQVLMMKEEHVGKTG------------RSKARPTVSWLRRTEYMGNDLYDAVHKFKSEAEIQSALREGTENALAEVVSVTLEDRAEASFRDINEPKLLVHPFNKKKKIAKTWDVFPDQVLSANKYAILSYDILPSEDVKSKGIT-----SREDRALLCGVSKKIQA-GNELIQGSILLPN--------TSSEEEENADR--EKFAYLREYLMSVESLDPRETQS--------QHCVFMLDPESDQFTYSDLLTRIQLRKTKMTGEEKRRHGAVVRRRDYSEGE 417          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: A0A5D6XM87_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM87_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.990e-32
Identity = 110/355 (30.99%), Postives = 165/355 (46.48%), Query Frame = 0
Query:  104 KDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDP---IEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVTGSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDL--ANLPAEDQANRG 453
            K SEFL  L+FRN LPD P    FLK P   ++L++Y P TLE  + +++H   +LG+ +D+ID   Y  P  P  L   D ++L   +     G  +A               +V WL++T Y+  D +DAVHKF+S+ ++Q   +E  +  + E            SF + N+ K  VH  NK L    V  VLPD  L  N YT + +DI P   I+ +++        ++R  +A++  V K  K  GD  + GS ++P    E       E  E+ AE    FA+ ++Y M V+N                 H VFI D  S + T+  +  R+ L    L  ED+  RG
Sbjct:   90 KQSEFLATLEFRNALPDLPFDTKFLKYPHESERLIKYKPNTLEADYTYEIHEEANLGLSVDLIDPAKYEAPVNPGKLEVGDEQVLMMKEESNKAGKTKAR-------------PAVPWLRRTEYMGTDLYDAVHKFKSEVEIQSALREGTENALAEVVNITLEDRAEASFKDINNPKTFVHPFNKKLKVAKVWDVLPDPLLAANKYTVLSYDILPSTDIKSKNI--------KEREARALLSGVTK--KGQGDS-IQGSILLPSAVNE----EEKEQDEQHAEK---FAYFREYLMAVENLERSDSQ----------HTVFIFDPESEQFTYSDILHRIQLKKTRLNGEDKRRRG 403          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: K3W793_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W793_GLOUD)

HSP 1 Score: 139 bits (349), Expect = 1.500e-31
Identity = 105/355 (29.58%), Postives = 170/355 (47.89%), Query Frame = 0
Query:  104 KDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDP---IEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVTGSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDL--ANLPAEDQANRG 453
            K SEFL +L+FRN LPD P    FL+ P   ++L++Y P TLE  + +++H   +LG++ID+ID   Y  P  P  L   D + L   +     G  +A               +V+WL++T Y+  D +DAVHKF+S+ ++Q   +E  +  + E  +         SF + N+   LVH  NK L    V  VLPD  L  N Y  + +DI P   I+ +++        + R  +A++  V K  KS G +++ GS ++P  + E       E  E+       FA+ ++Y M+V++  + +            H VF+ D  S + T+  +  R+ L    L  ED+  RG
Sbjct:  110 KQSEFLANLEFRNALPDLPFDTKFLQYPHENERLIKYKPNTLEADYTYEIHEEANLGLNIDLIDPAKYEAPTVPVKLEIGDEQALMMKEETNKAGKTKAR-------------PAVSWLRRTEYMGTDLYDAVHKFKSEVEIQSALREGTENALAEVVQITLEQRAEASFKDINNPATLVHPFNKKLKIAKVWDVLPDQLLSSNKYAILSYDILPSTDIKSKNI--------KDREARALLSGVSK--KSQGGDYIQGSILLPNASNE------EEHKEQXXXEVEKFAYFREYLMSVESLESNETQ----------HSVFMFDPESDQFTYSDILHRIQLKKTKLNGEDKRRRG 425          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: A0A1V9ZA09_9STRA (RNA polymerase II-associated factor 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA09_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.790e-31
Identity = 112/394 (28.43%), Postives = 182/394 (46.19%), Query Frame = 0
Query:   88 KVLEQQKIQTARRKWQKDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVTGSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAEDQANRGPGMEVARRPPSDEEFQAMGEKVAKDLGV 481
            KVLEQQ  +  R    + SEFL  L+FRN LPD P    FL  P    + V+Y P  +E    W+    R+LG+++D+ID   Y VP   P + P+D  L+   ++  G+   +A           ++   V+WL++T Y+  D  +AVH+F+++ ++Q + +++ Q  +  S   D      +SF    +K+ + H   KSL    V  V PD  L  N Y+ + +DI P +E  L A  ++R+ +    +I+ NV  +    G + + GS + P          S E           F + +DY +N+ ++PA            +  L+ ++   S+ AT+C LS  + L          R  G  V RR  SD E +   E +A   GV
Sbjct:   49 KVLEQQAQEKRRVLLGRQSEFLGTLEFRNTLPDVPFDAKFLSYPADPQRFVKYKPNQVEKDFVWEFFPERNLGLNVDLIDPEKYEVP-VDPQMDPEDLALINMPEIVNGSSITKA-----------KIRPHVSWLRRTEYMGTDLSEAVHQFKNENELQTEIRDKNQSML--SVIADIEVRAEKSFENCPTKETVKHPLKKSLKAAQVWDVFPDELLSSNVYSILSYDILPSDET-LDASIKEREAR----SILRNVVTV-SQPGSDVLLGSILFPSAHNNSDDNGSPEK----------FKFFRDYVLNISHFPA-----------EVQQLMLMLKPGSTSATYCSLSTNIGLKKTKLGGDEKRRRGAVVHRRAYSDAEEEKRLESLAAVGGV 401          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: A0A7S3YEK7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEK7_HETAK)

HSP 1 Score: 113 bits (282), Expect = 1.180e-24
Identity = 80/237 (33.76%), Postives = 120/237 (50.63%), Query Frame = 0
Query:  210 MQRKQVDTSVTWLKKTVYLTNDPFDA-VHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSF-AEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQ--RKRQRADKAIVGNVRKLRKSDGDEFV-TGSYMVPKEAGEGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDL 441
            ++RK VDT+VTW+K+T YL+ND + A VH F+S      +    + ++M E       + +  +F A A     L H TN  L  EW +PVLPD  LW N + HV FD+DP+ ++     P     K+QR +KAI+ +VR+       + V   SY+VPK AG+ G G   E           F  ++ YQ++V++                   VF++D    +AT+C+L  RVDL
Sbjct:    7 LKRKSVDTNVTWMKRTTYLSNDLYGAPVHAFKSQAAAVAEQNAGLDQEMVEVNLQSAATKIEATFHAAAKDLAALRHPTNPGLRAEWALPVLPDVGLWANVFMHVGFDLDPVTQDDPNKDPEHIAEKKQRFEKAIISDVRENEGGGTSKPVMVASYLVPK-AGQTGAGEGGELA---------FEHLRGYQIDVRDTEN--------------TFVFLVDAEGGQATYCRLDTRVDL 219          
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Match: A0A662XQX2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQX2_9STRA)

HSP 1 Score: 113 bits (283), Expect = 6.010e-23
Identity = 103/393 (26.21%), Postives = 173/393 (44.02%), Query Frame = 0
Query:  104 KDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHKWKLHCNRDLGVDIDIIDSRSYS----------------------------VPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLRKSDGDEFVTGSYMVPKEAG-EGGGGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAEDQANRGPGMEVARRPPSDEE 467
            K SEFL  L+FRN LPD P    F++ P   ++L++Y P TLE  + +++H   +LG+ ID+ID   Y                              P+ P  L   D ++L              +E  + ++ R +   +V+WL++T Y+ ND +DAVHKF+S+ ++Q   +E  +  + E            SF + N  K LVH   K      +  V PD  L  N Y  + +DI P E+        +    R D+A++  + K  ++ G+E + GS ++P  A  E     +     K  +    F+++++Y M+V++  +              H VF++D  S++ T+  +  R+ L       +  R  G  V RR  SD E
Sbjct:  119 KQSEFLATLEFRNALPDIPFDTKFVQYPHERERLIKYKPNTLEQDYTYEIHEEANLGLPIDLIDPAKYEGASPIFGFNTAKVWLLTDVIIAATALAIAPENPGPLEIGDEQVLMM------------KEDHAGKVGRSKARPTVSWLRRTEYMGNDLYDAVHKFKSEVEIQSALREGTENALAEVVSITLEDRAEASFRDINDPKLLVHPFQKKKKIAKMWDVFPDQVLSANKYAILSYDILPSEDIKS-----KGIENREDRAVLCGISKKIQA-GNELIQGSILLPNAADDEVWMDTTYRLSSKDHDDREKFSYLREYLMSVESLES--------------HCVFMLDPESNQFTYSDILNRIQLK------KTKRHRGAIVHRREYSDAE 473          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349666 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRH5_9STRA0.000e+0100.00Paf1-domain-containing protein n=1 Tax=Tribonema m... [more]
D7FXY8_ECTSI4.060e-10542.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2D5H7_9STRA3.400e-3633.13Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3YBK4_HETAK6.220e-3357.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A3R7J8I8_9STRA7.840e-3329.40Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A5D6XM87_9STRA2.990e-3230.99Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W793_GLOUD1.500e-3129.58Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1V9ZA09_9STRA4.790e-3128.43RNA polymerase II-associated factor 1 n=1 Tax=Achl... [more]
A0A7S3YEK7_HETAK1.180e-2433.76Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662XQX2_9STRA6.010e-2326.21Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..384
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 506..572
NoneNo IPR availablePANTHERPTHR23188:SF12RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOGcoord: 57..472
IPR007133RNA polymerase II associated factor Paf1PFAMPF03985Paf1coord: 107..480
e-value: 1.7E-49
score: 168.9
IPR007133RNA polymerase II associated factor Paf1PANTHERPTHR23188RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOGcoord: 57..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:46974..50242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349666mRNA_6176Tribonema minus UTEX_B_3156 mRNAContig_47 46974..50378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349666|estExt_Genemark1.C_Ctg_470007 ID=Trimin1|349666|estExt_Genemark1.C_Ctg_470007|Name=jgi.p|Trimin1|349666|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=573bp
MATLQPMETDMASQLQPPPPPPLPVPPAATSQQAAASAGAGADGVPPDSS
RHREESSKEKEDRRRKDKERVQKERAEKEKIRKEHARKVLEQQKIQTARR
KWQKDSEFLCHLKFRNNLPDPPLGPHFLKIPLSMDKLVQYTPTTLETQHK
WKLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAA
EAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAK
ERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHATNKSLTPEWVMPVLP
DAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLRKS
DGDEFVTGSYMVPKEAGEGGGGGSAEGGEKGAEGGTGFAWVKDYQMNVQN
YPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAEDQA
NRGPGMEVARRPPSDEEFQAMGEKVAKDLGVLAAKHMRRAAADAAAVSSR
GAGEGVRGGRGYGHGGADGARGGGGGDGDGDSVMTEHLESEGSNVAVKGT
DTSEGDEMSRVGMDDSDEDGLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007133RNA_pol_II-assoc_Paf1