mRNA_4689 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A835Z185_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z185_9STRA) HSP 1 Score: 717 bits (1850), Expect = 3.480e-260 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 1
Query: 97 MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQDT 1200
MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQDT
Sbjct: 1 MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQDT 368
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A835YZ17_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ17_9STRA) HSP 1 Score: 563 bits (1450), Expect = 2.660e-199 Identity = 291/366 (79.51%), Postives = 306/366 (83.61%), Query Frame = 1
Query: 97 MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQ 1194
M+PAEA AVADLDWEDWSGEGNFVHHMLAGSIAG+TEHTVMFPVDT+KTHIQCMRECPERQAG+RVLEMVRGQGMLRLWRGVGTMF+GCVPAHAAYFS+LE K RFGAN GGH PVAAAAAG ATVFHDA MTPMDVIKQRLQLGYYRGIGDCVRTI R EG ALYRSFPTTLFMNIPYGA+MVAANESLKTALRPRGDHTTAT+M AGCGAGAVAAAATTPLDVVKT LQTQA+ A R AA AA H + P+ G L G A GA A MPAVFHSNAA RC +GCGEKPEV LQYRG VDA R+I A +G G FRGVVPRL+VHAPSVAISWTTYETAKRWLQ
Sbjct: 1 MDPAEAVAVADLDWEDWSGEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAA-H-SGNGLGKLPVLLGRGLRQGG-----AGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQ 359
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A6H5KLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW9_9PHAE) HSP 1 Score: 348 bits (892), Expect = 9.540e-116 Identity = 172/245 (70.20%), Postives = 195/245 (79.59%), Query Frame = 1
Query: 106 AEAAAVADLDWEDWS-GEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAA 837
A A++ + DWEDW +GNF+HHM+AGSIAG+TEHTVM+PVDT KT++QCMRECPE AG RV+EMVRGQGMLRLWRGVGTMF GCVPAHA YFS+LE CK+R G N GH P AA AG ATVFHDAVMTPMDV+KQRLQLGY++G+ DCV TI R EG A YRSFPTTLFMNIPYG +MVA NESLK +RP GD+ T++LAG GAGA+AA AT PLDVVKT LQTQA A AA
Sbjct: 8 AGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLENCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKRVMRPAGDYDAKTFLLAGSGAGAIAAVATNPLDVVKTRLQTQAFRGVAAPQAA 252
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: W7U8D3_9STRA (Mitoferrin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D3_9STRA) HSP 1 Score: 343 bits (879), Expect = 2.500e-111 Identity = 207/426 (48.59%), Postives = 255/426 (59.86%), Query Frame = 1
Query: 103 PAEAAAV----ADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMR-----ECPERQA--------------------GSRVLE-------------MVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXX-----------PIFAGTALASSGLLRRACAA--PAGATVA-------LMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
PAE + ADLDWEDW + G+FVHHM+AGSIAG+ EHT+M+PVDT+KT +QC C +++ G+ V+E +V+ +G LRLWRGV TM CVPAHAAYFS LE CKERFG NG H + AAAAG AT+FHD++MTPMDVIKQRLQLGYY+G+ C +I R EGV A Y S P TLFMN+PYG +MVAANES+K L+P GD+TT TY+LAG GAGA+AAAATTPLD++KT LQTQ + TR + APH P P F AS L A A PAG+ V+ S+ + GC +L+Y+G +DAA++I A +G G FRG+VPRL+VH PSVAISWTTYET K L
Sbjct: 17 PAECHGIGGGDADLDWEDWDPKTGSFVHHMIAGSIAGIAEHTLMYPVDTIKTFMQCQECSLTANCLKQRTVVAAAAAVSGREGLGEAAARGASVVEGSVGLTSFEAAFRLVQKEGTLRLWRGVSTMLSACVPAHAAYFSALESCKERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQ-VTIQTTR--STGHAPHGRPPGAGEVGRGNGALHTVSPGFHRPTSASMSPLAAAHEAMSPAGSRVSPXXXXXXXXXPPLRSHVTSSSDGGCRRAEHTRLRYKGIMDAAKQIHAAEGAMGFFRGMVPRLLVHTPSVAISWTTYETVKDML 439
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A7S3Y5R4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R4_HETAK) HSP 1 Score: 323 bits (828), Expect = 2.650e-105 Identity = 186/366 (50.82%), Postives = 222/366 (60.66%), Query Frame = 1
Query: 121 VADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSR-------VLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPE-VKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
+ DL+WEDW E G+F HM+AGS AGV EH M+P+DTLKTH+QC + P ++ SR ++ ++ QGMLRLWRGV TM +GC+PAHAAYFS++ELCKE FG N GH P+AAAA G A+VFHD +MTP+DV+KQRLQLGYYRGI DC RT+ R EG A + S P TL MNIPYG IMVA NESLK LRP GD+ T+M AG GAGA A+ TTPLDVVKT LQ Q AT AAAA H PAG V AA +P + L+Y G AAR + +G G +RG +PRL V APSVAISWT YE K+ L
Sbjct: 7 IEDLEWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHK--PRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQVQ----RATAGAAAADFGH---------------------------GRPAGRGVGQTRPTATVTAAQLGAARLEPRPRALGLKYSGVAAAARAVWEREGPRGFYRGALPRLCVQAPSVAISWTAYEETKKLL 339
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: K3X9N6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9N6_GLOUD) HSP 1 Score: 305 bits (781), Expect = 6.290e-98 Identity = 176/366 (48.09%), Postives = 222/366 (60.66%), Query Frame = 1
Query: 115 AAVADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECP------ERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
A V D DWE+W+ E G+F+HHMLAGS AGV EH +FP+DT+KTH+QC R CP + A +++ +G LRL+RGV TM +PAHA YFS+ E K+ GA+ H P+A+ AAGV ATV HD +MTPMDVIKQRLQLGYY G+ DC +TI R EG+ ALY SFPTT FMN+PY IMV+ANE+ K L P G+ + Y +G AGA+A T PLDV KT LQTQ + + A S L R A TV + H AA + I G +P+++LQYRG DA +IRA +G +G FRGV PRL+V APSVA+SWTT+E K+ L
Sbjct: 17 APVIDEDWEEWTPEKGSFLHHMLAGSAAGVAEHVSIFPIDTIKTHMQCQR-CPVNGKPLKLSATHTARKLIAEEGPLRLFRGVSTMLSASLPAHAVYFSVFESMKKTLGADSAEHTPIASGAAGVVATVCHDMIMTPMDVIKQRLQLGYYSGVTDCFKTIVRQEGLRALYISFPTTFFMNLPYSMIMVSANETFKKILNPSGEMNISAYFASGAMAGALAGVLTNPLDVAKTRLQTQMLLVQEDPSCPSRAR--------------------CSQLQTRGVAL----TVPTSCTIKHPVAATKTIGG---EPKMRLQYRGLFDALVQIRAQEGMTGFFRGVYPRLLVQAPSVAVSWTTFEVLKKTL 354
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A8K1CHZ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHZ7_PYTOL) HSP 1 Score: 303 bits (777), Expect = 2.220e-97 Identity = 173/375 (46.13%), Postives = 229/375 (61.07%), Query Frame = 1
Query: 103 PAEAAAVADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECP------ERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQA--IHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGL---LRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
P + V D DWE+W+ E G+F+HHM+AGS AGV EH +FP+DT+KTH+QC R CP + A ++ +G LRL+RGV TM +PAH+ YFS+ E K+ FGA+ H P+A+ AAGV ATV HD +MTPMDV+KQRLQLGYY G+GDC+R+I R EGV ALY SFPTT MN+PY IMV+ANE+ K L P G+ A Y+ +G A T PLDV KT LQTQ + AT + A T L + G+ + ACA + H++ + + GE P++++QYRG +DA +IRA +G++G FRGV PRL+VHAPSVA+SWTT+E K+ L
Sbjct: 6 PILSTTVIDEDWEEWTPEKGSFLHHMVAGSAAGVAEHVSIFPIDTIKTHMQCQR-CPVNGKPLQISAVETARRLIAKEGPLRLFRGVSTMLSASLPAHSVYFSVFEAAKKAFGADSQEHTPLASGAAGVCATVCHDLIMTPMDVVKQRLQLGYYNGVGDCMRSIIRHEGVRALYISFPTTFIMNLPYSMIMVSANETFKKILNPSGELNVAAYIASGAAAXXXXXVLTNPLDVAKTRLQTQMMLVEEEATCRSGPCA-----------------TQLQTRGVKLSVPEACA------------IRHADVSTSASRPAGE-PKLRVQYRGLLDALIQIRAQEGYAGFFRGVGPRLLVHAPSVAVSWTTFEVLKKTL 349
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A7S3Y5E3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E3_HETAK) HSP 1 Score: 291 bits (746), Expect = 2.690e-93 Identity = 145/238 (60.92%), Postives = 174/238 (73.11%), Query Frame = 1
Query: 121 VADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSR-------VLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAI 810
+ DL+WEDW E G+F HM+AGS AGV EH M+P+DTLKTH+QC + P ++ SR ++ ++ QGMLRLWRGV TM +GC+PAHAAYFS++ELCKE FG N GH P+AAAA G A+VFHD +MTP+DV+KQRLQLGYYRGI DC RT+ R EG A + S P TL MNIPYG IMVA NESLK LRP GD+ T+M AG GAGA A+ TTPLDVVKT LQ Q +
Sbjct: 7 IEDLEWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHK--PRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQKQRV 242
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: W4H6D4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6D4_9STRA) HSP 1 Score: 283 bits (724), Expect = 6.990e-90 Identity = 162/363 (44.63%), Postives = 203/363 (55.92%), Query Frame = 1
Query: 127 DLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMREC-----PERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQD 1197
D DWEDW+ E G+F+HHMLAGS AGV EH +FP+DT+KTH+QC R P+ A ++ G RL+RGV TM +PAHA YFS+ E CKE+FGA+ H P+ + AAGV T+ HD VMTPMDVIKQRLQLGYY G+ +CV+T+ R EG+ ALY SFPTTLFMN+PY IMV+ NES+K L P G+ Y+ +G A T PLDV KT LQTQ + T C G A+ + K+QYRGF+DA +I +G +G FRGV PR+ VHAPSVA+SWTT+E K+ L D
Sbjct: 7 DEDWEDWTPEKGSFIHHMLAGSAAGVVEHCSIFPIDTIKTHMQCQRCALNPGKPQLTAFQTASMLIAKDGPRRLFRGVSTMLGASLPAHALYFSVFESCKEKFGADSPEHTPIQSGAAGVIGTIMHDLVMTPMDVIKQRLQLGYYSGVVNCVQTMVRTEGLRALYISFPTTLFMNLPYSMIMVSTNESMKKLLNPSGEINVGAYVFSGAIAXXXXXXITNPLDVTKTRLQTQMMSLDDTL----------------------------------TCGGKVGG--------------AKNCDKMVQSAAPKVQYRGFLDAFGQIYKHEGVAGFFRGVGPRVCVHAPSVAVSWTTFEVLKKLLGD 321
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A6G0XW02_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW02_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.400e-89 Identity = 162/362 (44.75%), Postives = 204/362 (56.35%), Query Frame = 1
Query: 127 DLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECP------ERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
D DWE+W+ E G+F++HM+AGS AGV EH +FP+DT+KTH+QC R CP + A +++ G +RL+RGV TM +PAHA YFS+ E CK+ FGA+ H P+ + AAGV ATV HD VMTPMDVIKQRLQLGYY G+ DC++T+ R EG+ ALY SFPTTLFMN+PY IMV NES+K L P G+ Y+++G A T PLDVVKT LQTQ + T C G A C Q +K K+QY G DA +I +G G FRGV PR+ VHAPSVA+SWTT+E K+ L
Sbjct: 6 DEDWEEWTPEKGSFLNHMIAGSAAGVVEHCSIFPIDTIKTHMQCQR-CPVNNGAIQMSAFQTASKLIAQDGPMRLFRGVSTMLGASLPAHALYFSVFEACKKAFGADSPDHTPIQSGAAGVIATVTHDLVMTPMDVIKQRLQLGYYSGVFDCMKTMIRTEGLHALYISFPTTLFMNLPYSMIMVTTNESMKKLLNPSGEINVGAYVMSGVIAXXXXXXVTNPLDVVKTRLQTQLLLLDETL----------------------------------TCGGKVGG-------------AKNCDQQLLKKGAPKMQYSGLADAFNQIYKQEGVPGFFRGVGPRVCVHAPSVAVSWTTFEVLKKLL 319 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_4689 ID=mRNA_4689|Name=jgi.p|Trimin1|349658|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_46:881788..884011- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGCTCCCCTGCCCGAGCATTCAACAAGAGGGCAAGCAGCGCAAGGGACAback to top protein sequence of jgi.p|Trimin1|349658 >Trimin1|349658|estExt_Genemark1.C_Ctg_460132 ID=Trimin1|349658|estExt_Genemark1.C_Ctg_460132|Name=jgi.p|Trimin1|349658|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=369bp MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHback to top mRNA from alignment at Contig_46:881788..884011- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_4689 ID=mRNA_4689|Name=jgi.p|Trimin1|349658|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2224bp|location=Sequence derived from alignment at Contig_46:881788..884011- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_46:881788..884011- >mRNA_4689 ID=mRNA_4689|Name=jgi.p|Trimin1|349658|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1107bp|location=Sequence derived from alignment at Contig_46:881788..884011- (Tribonema minus UTEX_B_3156 )back to top |