mRNA_4689 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349658
Unique NamemRNA_4689
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A835Z185_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z185_9STRA)

HSP 1 Score: 717 bits (1850), Expect = 3.480e-260
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 1
Query:   97 MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQDT 1200
            MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQDT
Sbjct:    1 MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQDT 368          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A835YZ17_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ17_9STRA)

HSP 1 Score: 563 bits (1450), Expect = 2.660e-199
Identity = 291/366 (79.51%), Postives = 306/366 (83.61%), Query Frame = 1
Query:   97 MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQ 1194
            M+PAEA AVADLDWEDWSGEGNFVHHMLAGSIAG+TEHTVMFPVDT+KTHIQCMRECPERQAG+RVLEMVRGQGMLRLWRGVGTMF+GCVPAHAAYFS+LE  K RFGAN GGH PVAAAAAG  ATVFHDA MTPMDVIKQRLQLGYYRGIGDCVRTI R EG  ALYRSFPTTLFMNIPYGA+MVAANESLKTALRPRGDHTTAT+M AGCGAGAVAAAATTPLDVVKT LQTQA+   A R  AA AA H +       P+  G  L   G       A  GA  A MPAVFHSNAA RC +GCGEKPEV LQYRG VDA R+I A +G  G FRGVVPRL+VHAPSVAISWTTYETAKRWLQ
Sbjct:    1 MDPAEAVAVADLDWEDWSGEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAA-H-SGNGLGKLPVLLGRGLRQGG-----AGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQ 359          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A6H5KLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW9_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 9.540e-116
Identity = 172/245 (70.20%), Postives = 195/245 (79.59%), Query Frame = 1
Query:  106 AEAAAVADLDWEDWS-GEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAA 837
            A A++  + DWEDW   +GNF+HHM+AGSIAG+TEHTVM+PVDT KT++QCMRECPE  AG RV+EMVRGQGMLRLWRGVGTMF GCVPAHA YFS+LE CK+R G N  GH P  AA AG  ATVFHDAVMTPMDV+KQRLQLGY++G+ DCV TI R EG  A YRSFPTTLFMNIPYG +MVA NESLK  +RP GD+   T++LAG GAGA+AA AT PLDVVKT LQTQA    A   AA
Sbjct:    8 AGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLENCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKRVMRPAGDYDAKTFLLAGSGAGAIAAVATNPLDVVKTRLQTQAFRGVAAPQAA 252          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: W7U8D3_9STRA (Mitoferrin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D3_9STRA)

HSP 1 Score: 343 bits (879), Expect = 2.500e-111
Identity = 207/426 (48.59%), Postives = 255/426 (59.86%), Query Frame = 1
Query:  103 PAEAAAV----ADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMR-----ECPERQA--------------------GSRVLE-------------MVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXX-----------PIFAGTALASSGLLRRACAA--PAGATVA-------LMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
            PAE   +    ADLDWEDW  + G+FVHHM+AGSIAG+ EHT+M+PVDT+KT +QC        C +++                     G+ V+E             +V+ +G LRLWRGV TM   CVPAHAAYFS LE CKERFG NG  H  + AAAAG  AT+FHD++MTPMDVIKQRLQLGYY+G+  C  +I R EGV A Y S P TLFMN+PYG +MVAANES+K  L+P GD+TT TY+LAG GAGA+AAAATTPLD++KT LQTQ +    TR  +   APH   P                P F     AS   L  A  A  PAG+ V+              S+  +    GC      +L+Y+G +DAA++I A +G  G FRG+VPRL+VH PSVAISWTTYET K  L
Sbjct:   17 PAECHGIGGGDADLDWEDWDPKTGSFVHHMIAGSIAGIAEHTLMYPVDTIKTFMQCQECSLTANCLKQRTVVAAAAAVSGREGLGEAAARGASVVEGSVGLTSFEAAFRLVQKEGTLRLWRGVSTMLSACVPAHAAYFSALESCKERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQ-VTIQTTR--STGHAPHGRPPGAGEVGRGNGALHTVSPGFHRPTSASMSPLAAAHEAMSPAGSRVSPXXXXXXXXXPPLRSHVTSSSDGGCRRAEHTRLRYKGIMDAAKQIHAAEGAMGFFRGMVPRLLVHTPSVAISWTTYETVKDML 439          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A7S3Y5R4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R4_HETAK)

HSP 1 Score: 323 bits (828), Expect = 2.650e-105
Identity = 186/366 (50.82%), Postives = 222/366 (60.66%), Query Frame = 1
Query:  121 VADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSR-------VLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPE-VKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
            + DL+WEDW  E G+F  HM+AGS AGV EH  M+P+DTLKTH+QC +  P ++  SR        ++ ++ QGMLRLWRGV TM +GC+PAHAAYFS++ELCKE FG N  GH P+AAAA G  A+VFHD +MTP+DV+KQRLQLGYYRGI DC RT+ R EG  A + S P TL MNIPYG IMVA NESLK  LRP GD+   T+M AG GAGA A+  TTPLDVVKT LQ Q     AT  AAAA   H                             PAG  V          AA         +P  + L+Y G   AAR +   +G  G +RG +PRL V APSVAISWT YE  K+ L
Sbjct:    7 IEDLEWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHK--PRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQVQ----RATAGAAAADFGH---------------------------GRPAGRGVGQTRPTATVTAAQLGAARLEPRPRALGLKYSGVAAAARAVWEREGPRGFYRGALPRLCVQAPSVAISWTAYEETKKLL 339          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: K3X9N6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9N6_GLOUD)

HSP 1 Score: 305 bits (781), Expect = 6.290e-98
Identity = 176/366 (48.09%), Postives = 222/366 (60.66%), Query Frame = 1
Query:  115 AAVADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECP------ERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
            A V D DWE+W+ E G+F+HHMLAGS AGV EH  +FP+DT+KTH+QC R CP      +  A     +++  +G LRL+RGV TM    +PAHA YFS+ E  K+  GA+   H P+A+ AAGV ATV HD +MTPMDVIKQRLQLGYY G+ DC +TI R EG+ ALY SFPTT FMN+PY  IMV+ANE+ K  L P G+   + Y  +G  AGA+A   T PLDV KT LQTQ +         + A                      S L  R  A     TV     + H  AA + I G   +P+++LQYRG  DA  +IRA +G +G FRGV PRL+V APSVA+SWTT+E  K+ L
Sbjct:   17 APVIDEDWEEWTPEKGSFLHHMLAGSAAGVAEHVSIFPIDTIKTHMQCQR-CPVNGKPLKLSATHTARKLIAEEGPLRLFRGVSTMLSASLPAHAVYFSVFESMKKTLGADSAEHTPIASGAAGVVATVCHDMIMTPMDVIKQRLQLGYYSGVTDCFKTIVRQEGLRALYISFPTTFFMNLPYSMIMVSANETFKKILNPSGEMNISAYFASGAMAGALAGVLTNPLDVAKTRLQTQMLLVQEDPSCPSRAR--------------------CSQLQTRGVAL----TVPTSCTIKHPVAATKTIGG---EPKMRLQYRGLFDALVQIRAQEGMTGFFRGVYPRLLVQAPSVAVSWTTFEVLKKTL 354          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A8K1CHZ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHZ7_PYTOL)

HSP 1 Score: 303 bits (777), Expect = 2.220e-97
Identity = 173/375 (46.13%), Postives = 229/375 (61.07%), Query Frame = 1
Query:  103 PAEAAAVADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECP------ERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQA--IHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGL---LRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
            P  +  V D DWE+W+ E G+F+HHM+AGS AGV EH  +FP+DT+KTH+QC R CP      +  A      ++  +G LRL+RGV TM    +PAH+ YFS+ E  K+ FGA+   H P+A+ AAGV ATV HD +MTPMDV+KQRLQLGYY G+GDC+R+I R EGV ALY SFPTT  MN+PY  IMV+ANE+ K  L P G+   A Y+ +G  A       T PLDV KT LQTQ   +   AT  +   A                 T L + G+   +  ACA            + H++ +    +  GE P++++QYRG +DA  +IRA +G++G FRGV PRL+VHAPSVA+SWTT+E  K+ L
Sbjct:    6 PILSTTVIDEDWEEWTPEKGSFLHHMVAGSAAGVAEHVSIFPIDTIKTHMQCQR-CPVNGKPLQISAVETARRLIAKEGPLRLFRGVSTMLSASLPAHSVYFSVFEAAKKAFGADSQEHTPLASGAAGVCATVCHDLIMTPMDVVKQRLQLGYYNGVGDCMRSIIRHEGVRALYISFPTTFIMNLPYSMIMVSANETFKKILNPSGELNVAAYIASGAAAXXXXXVLTNPLDVAKTRLQTQMMLVEEEATCRSGPCA-----------------TQLQTRGVKLSVPEACA------------IRHADVSTSASRPAGE-PKLRVQYRGLLDALIQIRAQEGYAGFFRGVGPRLLVHAPSVAVSWTTFEVLKKTL 349          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A7S3Y5E3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E3_HETAK)

HSP 1 Score: 291 bits (746), Expect = 2.690e-93
Identity = 145/238 (60.92%), Postives = 174/238 (73.11%), Query Frame = 1
Query:  121 VADLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSR-------VLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAI 810
            + DL+WEDW  E G+F  HM+AGS AGV EH  M+P+DTLKTH+QC +  P ++  SR        ++ ++ QGMLRLWRGV TM +GC+PAHAAYFS++ELCKE FG N  GH P+AAAA G  A+VFHD +MTP+DV+KQRLQLGYYRGI DC RT+ R EG  A + S P TL MNIPYG IMVA NESLK  LRP GD+   T+M AG GAGA A+  TTPLDVVKT LQ Q +
Sbjct:    7 IEDLEWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHK--PRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQKQRV 242          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: W4H6D4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6D4_9STRA)

HSP 1 Score: 283 bits (724), Expect = 6.990e-90
Identity = 162/363 (44.63%), Postives = 203/363 (55.92%), Query Frame = 1
Query:  127 DLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMREC-----PERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQD 1197
            D DWEDW+ E G+F+HHMLAGS AGV EH  +FP+DT+KTH+QC R       P+  A      ++   G  RL+RGV TM    +PAHA YFS+ E CKE+FGA+   H P+ + AAGV  T+ HD VMTPMDVIKQRLQLGYY G+ +CV+T+ R EG+ ALY SFPTTLFMN+PY  IMV+ NES+K  L P G+     Y+ +G  A       T PLDV KT LQTQ +    T                                    C    G               A+      +    K+QYRGF+DA  +I   +G +G FRGV PR+ VHAPSVA+SWTT+E  K+ L D
Sbjct:    7 DEDWEDWTPEKGSFIHHMLAGSAAGVVEHCSIFPIDTIKTHMQCQRCALNPGKPQLTAFQTASMLIAKDGPRRLFRGVSTMLGASLPAHALYFSVFESCKEKFGADSPEHTPIQSGAAGVIGTIMHDLVMTPMDVIKQRLQLGYYSGVVNCVQTMVRTEGLRALYISFPTTLFMNLPYSMIMVSTNESMKKLLNPSGEINVGAYVFSGAIAXXXXXXITNPLDVTKTRLQTQMMSLDDTL----------------------------------TCGGKVGG--------------AKNCDKMVQSAAPKVQYRGFLDAFGQIYKHEGVAGFFRGVGPRVCVHAPSVAVSWTTFEVLKKLLGD 321          
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Match: A0A6G0XW02_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW02_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.400e-89
Identity = 162/362 (44.75%), Postives = 204/362 (56.35%), Query Frame = 1
Query:  127 DLDWEDWSGE-GNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECP------ERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWL 1191
            D DWE+W+ E G+F++HM+AGS AGV EH  +FP+DT+KTH+QC R CP      +  A     +++   G +RL+RGV TM    +PAHA YFS+ E CK+ FGA+   H P+ + AAGV ATV HD VMTPMDVIKQRLQLGYY G+ DC++T+ R EG+ ALY SFPTTLFMN+PY  IMV  NES+K  L P G+     Y+++G  A       T PLDVVKT LQTQ +    T                                    C    G              A  C Q   +K   K+QY G  DA  +I   +G  G FRGV PR+ VHAPSVA+SWTT+E  K+ L
Sbjct:    6 DEDWEEWTPEKGSFLNHMIAGSAAGVVEHCSIFPIDTIKTHMQCQR-CPVNNGAIQMSAFQTASKLIAQDGPMRLFRGVSTMLGASLPAHALYFSVFEACKKAFGADSPDHTPIQSGAAGVIATVTHDLVMTPMDVIKQRLQLGYYSGVFDCMKTMIRTEGLHALYISFPTTLFMNLPYSMIMVTTNESMKKLLNPSGEINVGAYVMSGVIAXXXXXXVTNPLDVVKTRLQTQLLLLDETL----------------------------------TCGGKVGG-------------AKNCDQQLLKKGAPKMQYSGLADAFNQIYKQEGVPGFFRGVGPRVCVHAPSVAVSWTTFEVLKKLL 319          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349658 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z185_9STRA3.480e-260100.00Mitoferrin-like protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ17_9STRA2.660e-19979.51Mitoferrin-like protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KLW9_9PHAE9.540e-11670.20Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
W7U8D3_9STRA2.500e-11148.59Mitoferrin-like protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3Y5R4_HETAK2.650e-10550.82Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3X9N6_GLOUD6.290e-9848.09Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CHZ7_PYTOL2.220e-9746.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3Y5E3_HETAK2.690e-9360.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W4H6D4_9STRA6.990e-9044.63Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A6G0XW02_9STRA1.400e-8944.75Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:881788..884011 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349658|estExt_Genemark1.C_Ctg_460132
DescriptionMitoferrin. Source PGD
COG categoryC
Max annot lvl121069|Pythiales
EggNOG OGsKOG0760@1|root,KOG0760@2759|Eukaryota,1MCEX@121069|Pythiales
Evalue2.45e-99
Seed ortholog65071.PYU1_T013935
Hectar predicted targeting categoryother localisation
TranscriptId349980
TrackFilteredModels1
ProteinId349658
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349658gene_4689Tribonema minus UTEX_B_3156 geneContig_46 881788..884011 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349658Trimin1|349658|estExt_Genemark1.C_Ctg_460132Tribonema minus UTEX_B_3156 polypeptideContig_46 881788..883915 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4689_4exon_4689_4Tribonema minus UTEX_B_3156 exonContig_46 881788..881958 -
exon_4689_3exon_4689_3Tribonema minus UTEX_B_3156 exonContig_46 882191..882993 -
exon_4689_2exon_4689_2Tribonema minus UTEX_B_3156 exonContig_46 883417..883534 -
exon_4689_1exon_4689_1Tribonema minus UTEX_B_3156 exonContig_46 883901..884011 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4689CDS_4689Tribonema minus UTEX_B_3156 CDSContig_46 883901..883915 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_4689UTR5_4689Tribonema minus UTEX_B_3156 five_prime_UTRContig_46 883916..884011 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4689 ID=mRNA_4689|Name=jgi.p|Trimin1|349658|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_46:881788..884011- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGCTCCCCTGCCCGAGCATTCAACAAGAGGGCAAGCAGCGCAAGGGACA
GCGGAGAAGGGAAGCATCGGTGATCGGGCTGAGCCTTTGAGCCACCATGG
AGCCTGCAGAGGCAGCAGCAGTTGCGGATTTGGACTGGGAGGACTGGTCT
GGAGAGGGCAATTTCGTTCATCACATGCTGGCGGGCTCAATAGCGGGAGT
CACTGAGCACACGGTCATGTTCCCAGTAGACACTCTGAAGACGCACATCC
AGTGCATGCGCGAGTGCCCCGAGCGGCAGGCGGGGTCGCGGGTGCTGGAG
ATGGTCCGGGGGCAGGGCATGCTGCGGCTGTGGCGCGGCGTCGGCACCAT
GTTCGTGGGCTGCGTCCCCGCGCACGCCGCTTACTTCAGCATACTGGAGC
TCTGCAAGGAGCGTTTCGGCGCGAACGGCGGCGGCCACGCGCCCGTCGCC
GCCGCCGCGGCGGGCGTGTTCGCCACCGTCTTCCACGACGCGGTGATGAC
GCCGATGGACGTCATCAAGCAGCGCCTGCAGCTCGGCTACTACAGGGGCA
TCGGCGACTGCGTGCGCACGATCGCGCGCGCGGAGGGCGTCGGCGCGCTG
TACCGCTCGTTCCCCACGACGCTCTTCATGAACATCCCCTACGGCGCCAT
CATGGTCGCCGCGAACGAGTCGCTCAAGACGGCGCTGCGGCCGCGCGGCG
ACCACACGACCGCGACGTACATGCTCGCGGGCTGCGGCGCGGGCGCCGTC
GCCGCCGCCGCCACCACGCCGCTCGACGTCGTCAAGACCATGCTGCAGAC
GCAGGCGATACACGCGCACGCCACGCGCTACGCCGCCGCCGCCGCCGCGC
CGCACGTCGCCGCGCCGGCGGCGGCAGCGGCGCCCATTTTTGCCGGCACG
GCGCTGGCGTCGTCGGGGCTGCTGCGCAGGGCGTGCGCGGCGCCCGCCGG
CGCCACTGTTGCGTTGATGCCGGCCGTGTTCCACAGCAACGCGGCGGCGC
GGTGCATACAGGGGTGCGGGGAGAAGCCGGAGGTCAAATTACAGTACAGG
GGTTTTGTGGACGCGGCGCGCGAAATAAGGGCCGTGCAGGGGTGGAGCGG
TCTGTTTAGGGGCGTTGTCCCCAGGCTGATGGTCCACGCGCCTAGCGTTG
CCATTTCGTGGACAACCTATGAAACGGCCAAGCGCTGGCTGCAGGACACG
TGA
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protein sequence of jgi.p|Trimin1|349658

>Trimin1|349658|estExt_Genemark1.C_Ctg_460132 ID=Trimin1|349658|estExt_Genemark1.C_Ctg_460132|Name=jgi.p|Trimin1|349658|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=369bp
MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTH
IQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSIL
ELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYR
GIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPR
GDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAA
APHVAAPAAAAAPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAA
ARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPS
VAISWTTYETAKRWLQDT*
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mRNA from alignment at Contig_46:881788..884011-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4689 ID=mRNA_4689|Name=jgi.p|Trimin1|349658|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2224bp|location=Sequence derived from alignment at Contig_46:881788..884011- (Tribonema minus UTEX_B_3156 )
CAGCTCCCCTGCCCGAGCATTCAACAAGAGGGCAAGCAGCGCAAGGGACA GCGGAGAAGGGAAGCATCGGTGATCGGGCTGAGCCTTTGAGCCACCATGG AGCCTGCAGAGGTAATCGAAGGCCGCTTTCCGCGGCCAATCCACTCGATG GCTTTTGTCAAACACCGCATTACCGTCTAGCTGGTACCAGCACAGTGCTG TGCACCAATTGCGCGTCAGAAACGCGCGAATACAGCTGCACTGCTGCATT GTCGCTCGGCGCTTCTCATGAGCTCCGCAAGTCCCTTGCTGAGCGCGTCT CGGTGCAGAGCAAGTGAACACCGTATGTATTTTTGTTGCTCGCAGCACCT GCGCTGCTGTCAGTCGGTCAGCACTTGCAACGATAGCATCGCTCGAACAC TTTTACTGCCCCCTCCTCTGATGTTTCATGTGGCCGATGTGGCTGATCCC GTGCTTGCTTTTTTGCTGTCATTGCAGGCAGCAGCAGTTGCGGATTTGGA CTGGGAGGACTGGTCTGGAGAGGGCAATTTCGTTCATCACATGCTGGCGG GCTCAATAGCGGGAGTCACTGAGCACACGGTCATGTTCCCAGTAGGTACG TGGTGATCAGACGTGTGCTGGCTCCTGTCTGTCCTCGCAGTTGCGTATGT CGCGTGTGTGTTTTCCTGGCTGCAGATGTTGACATCAGCCTCTCGTCAGC TGCCTGCTGCTGCCTTCGTCCAAACGTAATGGCACGCTCGCTGATTTTTG CTTGTGAACCCTTGCAATCGCGCTTGTGGATGGCATGTGGGCGCACTTCA TCGACGCCAGCCATCTCGTCAAGTGCCCTGCAGCTGCATTGGTCTACATT CTCGACATGAGAGTGCTGCGATGCGCTGCTCGTTGCCAGCAGCCCTTCAC CTGTGCACATGCTGGTCTCCTACAACATCAAGTTGTGCCCACAAATGCGC GCCCTACCCGCAACGCGCCCAAGCTAAATGGCCCCTTCCCCACGCGCGCT ACTGGTGCACACTCGCAGACACTCTGAAGACGCACATCCAGTGCATGCGC GAGTGCCCCGAGCGGCAGGCGGGGTCGCGGGTGCTGGAGATGGTCCGGGG GCAGGGCATGCTGCGGCTGTGGCGCGGCGTCGGCACCATGTTCGTGGGCT GCGTCCCCGCGCACGCCGCTTACTTCAGCATACTGGAGCTCTGCAAGGAG CGTTTCGGCGCGAACGGCGGCGGCCACGCGCCCGTCGCCGCCGCCGCGGC GGGCGTGTTCGCCACCGTCTTCCACGACGCGGTGATGACGCCGATGGACG TCATCAAGCAGCGCCTGCAGCTCGGCTACTACAGGGGCATCGGCGACTGC GTGCGCACGATCGCGCGCGCGGAGGGCGTCGGCGCGCTGTACCGCTCGTT CCCCACGACGCTCTTCATGAACATCCCCTACGGCGCCATCATGGTCGCCG CGAACGAGTCGCTCAAGACGGCGCTGCGGCCGCGCGGCGACCACACGACC GCGACGTACATGCTCGCGGGCTGCGGCGCGGGCGCCGTCGCCGCCGCCGC CACCACGCCGCTCGACGTCGTCAAGACCATGCTGCAGACGCAGGCGATAC ACGCGCACGCCACGCGCTACGCCGCCGCCGCCGCCGCGCCGCACGTCGCC GCGCCGGCGGCGGCAGCGGCGCCCATTTTTGCCGGCACGGCGCTGGCGTC GTCGGGGCTGCTGCGCAGGGCGTGCGCGGCGCCCGCCGGCGCCACTGTTG CGTTGATGCCGGCCGTGTTCCACAGCAACGCGGCGGCGCGGTGCATACAG GGGTGCGGGGAGAAGCCGGAGGTGAGGGTTGGCGGGTGACATTGCTGCAA TGTGCGCGTCATGGCGTTCATGGCGAGAAGGCAGGCGCAGCTCGGTCAAA GGCGTAGCTAGCTGAAGGTTGCTGCGGCTGCCGCAGTGCGAGTTGAACTG GAGAGGACCATGGTCATTGCACACAGCCCGCGGCAGGCTTCTCTGCGTGG TGATCCAAATTTGACCCGCCCTCCTCTTCCTCCTCCCCTGTTGTCTGCTG CAGGTCAAATTACAGTACAGGGGTTTTGTGGACGCGGCGCGCGAAATAAG GGCCGTGCAGGGGTGGAGCGGTCTGTTTAGGGGCGTTGTCCCCAGGCTGA TGGTCCACGCGCCTAGCGTTGCCATTTCGTGGACAACCTATGAAACGGCC AAGCGCTGGCTGCAGGACACGTGA
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Coding sequence (CDS) from alignment at Contig_46:881788..884011-

>mRNA_4689 ID=mRNA_4689|Name=jgi.p|Trimin1|349658|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1107bp|location=Sequence derived from alignment at Contig_46:881788..884011- (Tribonema minus UTEX_B_3156 )
ATGGAGCCTGCAGAGGCAGCAGCAGTTGCGGATTTGGACTGGGAGGACTG
GTCTGGAGAGGGCAATTTCGTTCATCACATGCTGGCGGGCTCAATAGCGG
GAGTCACTGAGCACACGGTCATGTTCCCAGTAGACACTCTGAAGACGCAC
ATCCAGTGCATGCGCGAGTGCCCCGAGCGGCAGGCGGGGTCGCGGGTGCT
GGAGATGGTCCGGGGGCAGGGCATGCTGCGGCTGTGGCGCGGCGTCGGCA
CCATGTTCGTGGGCTGCGTCCCCGCGCACGCCGCTTACTTCAGCATACTG
GAGCTCTGCAAGGAGCGTTTCGGCGCGAACGGCGGCGGCCACGCGCCCGT
CGCCGCCGCCGCGGCGGGCGTGTTCGCCACCGTCTTCCACGACGCGGTGA
TGACGCCGATGGACGTCATCAAGCAGCGCCTGCAGCTCGGCTACTACAGG
GGCATCGGCGACTGCGTGCGCACGATCGCGCGCGCGGAGGGCGTCGGCGC
GCTGTACCGCTCGTTCCCCACGACGCTCTTCATGAACATCCCCTACGGCG
CCATCATGGTCGCCGCGAACGAGTCGCTCAAGACGGCGCTGCGGCCGCGC
GGCGACCACACGACCGCGACGTACATGCTCGCGGGCTGCGGCGCGGGCGC
CGTCGCCGCCGCCGCCACCACGCCGCTCGACGTCGTCAAGACCATGCTGC
AGACGCAGGCGATACACGCGCACGCCACGCGCTACGCCGCCGCCGCCGCC
GCGCCGCACGTCGCCGCGCCGGCGGCGGCAGCGGCGCCCATTTTTGCCGG
CACGGCGCTGGCGTCGTCGGGGCTGCTGCGCAGGGCGTGCGCGGCGCCCG
CCGGCGCCACTGTTGCGTTGATGCCGGCCGTGTTCCACAGCAACGCGGCG
GCGCGGTGCATACAGGGGTGCGGGGAGAAGCCGGAGGTCAAATTACAGTA
CAGGGGTTTTGTGGACGCGGCGCGCGAAATAAGGGCCGTGCAGGGGTGGA
GCGGTCTGTTTAGGGGCGTTGTCCCCAGGCTGATGGTCCACGCGCCTAGC
GTTGCCATTTCGTGGACAACCTATGAAACGGCCAAGCGCTGGCTGCAGGA
CACGTGA
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