mRNA_4596 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349615
Unique NamemRNA_4596
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349615 vs. uniprot
Match: A0A835Z128_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z128_9STRA)

HSP 1 Score: 928 bits (2398), Expect = 0.000e+0
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 1 
Query:    1 MSFVHRYTEAECRVEARTLTARLNDESQNYFEFPSDAYLSCAIKNPKTDLCILRPAQDPCSPNPCKNGATCGVSYIADSTRCKRPVAQCRCAEVGSYVGATCARGCAANRAACGRSFSGYNGNSFTVNDKCCRPSEACLVVPGKYDDWRTECIPKVRPASCAPNPCKNGGTCDVVDYYGDRSIYTCDCAAGWTGSFSAATCGTGTKVTVQQKFGAGTCSLNVCCPRGLTAQQCKDGAKQFALDLTTNDENCYQFPSDVDVSCNVKDPSKSFCLLHPSPDPCSPNPCKHGARCTLSYTADSQGCHGAQVQCHCAEIGNYAGKLCGVTCAPDTAPCGRAYYDYDSNGFKTNDRCCKPSEACVRAPGKYGWFTVCVPKARPLSCDPNPCKNGGSCDTIDYYGDSNVHVCSCTSGWTGALCSTPNRPRV 1275
            MSFVHRYTEAECRVEARTLTARLNDESQNYFEFPSDAYLSCAIKNPKTDLCILRPAQDPCSPNPCKNGATCGVSYIADSTRCKRPVAQCRCAEVGSYVGATCARGCAANRAACGRSFSGYNGNSFTVNDKCCRPSEACLVVPGKYDDWRTECIPKVRPASCAPNPCKNGGTCDVVDYYGDRSIYTCDCAAGWTGSFSAATCGTGTKVTVQQKFGAGTCSLNVCCPRGLTAQQCKDGAKQFALDLTTNDENCYQFPSDVDVSCNVKDPSKSFCLLHPSPDPCSPNPCKHGARCTLSYTADSQGCHGAQVQCHCAEIGNYAGKLCGVTCAPDTAPCGRAYYDYDSNGFKTNDRCCKPSEACVRAPGKYGWFTVCVPKARPLSCDPNPCKNGGSCDTIDYYGDSNVHVCSCTSGWTGALCSTPNRPRV
Sbjct:    1 MSFVHRYTEAECRVEARTLTARLNDESQNYFEFPSDAYLSCAIKNPKTDLCILRPAQDPCSPNPCKNGATCGVSYIADSTRCKRPVAQCRCAEVGSYVGATCARGCAANRAACGRSFSGYNGNSFTVNDKCCRPSEACLVVPGKYDDWRTECIPKVRPASCAPNPCKNGGTCDVVDYYGDRSIYTCDCAAGWTGSFSAATCGTGTKVTVQQKFGAGTCSLNVCCPRGLTAQQCKDGAKQFALDLTTNDENCYQFPSDVDVSCNVKDPSKSFCLLHPSPDPCSPNPCKHGARCTLSYTADSQGCHGAQVQCHCAEIGNYAGKLCGVTCAPDTAPCGRAYYDYDSNGFKTNDRCCKPSEACVRAPGKYGWFTVCVPKARPLSCDPNPCKNGGSCDTIDYYGDSNVHVCSCTSGWTGALCSTPNRPRV 425
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BLAST of jgi.p|Trimin1|349615 vs. uniprot
Match: A0A835YK89_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK89_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 3.080e-135
Identity = 177/224 (79.02%), Postives = 198/224 (88.39%), Query Frame = 1 
Query:  589 SAATCGTGTKVTVQQKFGAGTCSLNVCCPRGLTAQQCKDGAKQFALDLTTNDENCYQFPSDVDVSCNVKDPSKSFCLLHPSPDPCSPNPCKHGARCTLSYTADSQGCHGAQVQCHCAEIGNYAGKLCGVTCAPDTAPCGRAYYDYDSNGFKTNDRCCKPSEACVRAPGKYGWFTVCVPKARPLSCDPNPCKNGGSCDTIDYYGDSNVHVCSCTSGWTGALCSTP 1260
            +AATCGTGTKVTVQQ+FGAGTC L+VCCP+G TAQQCKDGAK+ A  L TNDENCYQFPSDV+VSCNVK+PSKSFCLLHPSPDPCSPNPCKH ARCTLSYTA+++GC+G QVQCHCAEIGNYAGKLCG+TCAPD APCGR++YDYDSN F+TN +CCKPSEACVR P KYGW T C+PKARP SCDPNPCK+GG C    Y GD+N++VC C SGWTGALC  P
Sbjct:   18 AAATCGTGTKVTVQQQFGAGTCPLDVCCPQGHTAQQCKDGAKELAQLLPTNDENCYQFPSDVNVSCNVKNPSKSFCLLHPSPDPCSPNPCKHSARCTLSYTANARGCNGPQVQCHCAEIGNYAGKLCGITCAPDAAPCGRSFYDYDSNDFETNHKCCKPSEACVRMPSKYGWITDCLPKARPTSCDPNPCKHGGWCALFPYTGDANIYVCVCASGWTGALCGIP 241
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BLAST of jgi.p|Trimin1|349615 vs. uniprot
Match: A0A820REP9_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A820REP9_9BILA)

HSP 1 Score: 68.2 bits (165), Expect = 3.380e-8
Identity = 85/331 (25.68%), Postives = 118/331 (35.65%), Query Frame = 1 
Query:  481 CAPNPCKNGGTCDVVDYYGDRSIYTCDCAAGWTGSFSAATCGTGTKVTVQQKFGAGTC----SLN-VC-CPRGLTAQQCKDGAKQFALDLTTNDENCYQFPSDVDVSC-----------------NVKDP--------------------------------SKSFCLL---HPSPDPCSPNPCKHGARCTLSYTADSQGCHGAQVQCHCAE--IGNYAGKLCGVTCAPDTAPCGRAYYDYDSNGFKTNDRCC----KPSEACVRAPGKYGWFTVCVPKARPLSCDPNPCKNGGSC-------DTIDY-YGDSNVHVCSCTSGWTGALCST 1257
            C  N C+ GG C+++      +  TC C  G  G      C   +K      +  GTC    +L+ VC CP   T + C+        D   ND  C Q P+    +C                 N K P                                + SF +    H     C  NPC++   C ++ TA ++G       C C E  IG+Y   L   T         + Y  Y S+G   ND  C    K +  C   P   G  T C    R  SC+PNPCKNGG+C         I+Y +G    + C C +G+ G  C +
Sbjct:  109 CQTNDCR-GGDCEIISLPNGLTKKTCHCIQGVCGETCQRLCNATSKCDAHPCWFGGTCVDVANLDYVCLCPPNHTGKDCRT-LLSCQTDSCHNDGTCIQTPNGARCNCPENFRGDYCQYTTAAKVNKKAPPTQSRPQNNQDIIAAIAAISSSNTNNAPVIQRTNSFVVTMGDHAKFVFCLTNPCENEGTCFVTNTATTKGI------CVCREGFIGDYCEHLHNKTSTEV-----QGYRSYCSSGPCLNDGVCIEDGKSNGYCRCQPEFRG--TYCEVVIRTYSCNPNPCKNGGTCVLLENNQGEINYKFGVCAANKCVCKTGFAGPRCDS 424
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BLAST of jgi.p|Trimin1|349615 vs. uniprot
Match: UPI001425A810 (neurogenic locus notch homolog protein 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425A810)

HSP 1 Score: 58.5 bits (140), Expect = 3.970e-5
Identity = 84/337 (24.93%), Postives = 120/337 (35.61%), Query Frame = 1 
Query:  481 CAPNPCKNGGTCDVVDYYGDRSIYTCDCAAGWTGS-----FSAATCGTGTKVT----------VQQKF----GAGTCSL----------------NVCCPRGLTAQQCKDG--AKQFALDLTTNDENCYQFPSDVDVSCNVKDPSKSF--CLLH---PSPDP---CSPNPCKHGARCTLSYTADSQGCHGAQVQCHCAEIGNYAGKLCGVTCAPDTAPC---GRAYYDYDSNGFK------TNDRCCKPSEACVRAPGK--------------------YGWFTVCV-----PKARPLSCDPNPCKNGGSCDTIDYYGDSNVHVCSCTSGWTGALCS 1254
            C+ +PC NGG C     +     YTC C   + GS          C  G +             QQ      G  TC +                N CCP     ++ KDG   +    D+ T ++ C       DV+C   D    F  C L    P  +P   C  +PC++G  C    +          + C C+    + GK C +   PD  PC    R Y D +S  F+       ND   K  + C   PG+                    +G    C      P+ R +SC+  PCKNGG+C+   Y     ++ C C  G+TG  C+
Sbjct:   71 CSSSPCLNGGMC-----FRKNDYYTCICPRNYNGSECQNIVPDDVCYDGERTLDNGETTFNDICQQMCECNDGVVTCDVTDSCPEPACTNPVYLPNNCCPVCWPPEE-KDGFCPETSFSDIGTCEDTCQH-----DVNC-TGDQKCCFNGCGLSCTDPQSEPTTLCDQSPCQNGGTCIDILST--------VIMCQCSP--GFHGKYCEI---PDGKPCYYGDRWYRDGESERFQHCFDCVCNDGFFKCYDICAEKPGECPEGHDLNIDIYECDVDADCHGDEKCCTGACSQPQQRFISCEDEPCKNGGTCEG-SYTLRPLLYTCHCADGYTGNNCN 381
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BLAST of jgi.p|Trimin1|349615 vs. uniprot
Match: UPI001403E209 (lactadherin isoform X1 n=4 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001403E209)

HSP 1 Score: 57.4 bits (137), Expect = 6.190e-5
Identity = 38/143 (26.57%), Postives = 55/143 (38.46%), Query Frame = 1 
Query:  838 PCSPNPCKHGARCTLSYTADSQGCHGAQVQCHCAEIGNYAGKLCGVTCAPDTA--PCGRAYYDYDSNGFKTNDRCCKPSEACVRAPGKYGWFTVCVPKARPLSCDPNPCKNGGSCDTIDYYGDS-NVHVCSCTSGWTGALCST 1257
            PC PNPC++G  C    ++D           +C  +  + GK+C        A  P      D   N   T  R   P                         C PNPC+NGG C++I   GD+ + ++C C +G+ G  C T
Sbjct:   23 PCKPNPCQNGGSCLAGISSDPY---------YCICMDGFTGKVCAEVEQGSGAEEPTVYTLEDIRYNDVTTYSRLSGP-------------------------CSPNPCQNGGLCESISRRGDAFSEYICKCPTGFQGVHCQT 131
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BLAST of jgi.p|Trimin1|349615 vs. uniprot
Match: UPI0006B0B739 (neurogenic locus Notch protein-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0B739)

HSP 1 Score: 57.8 bits (138), Expect = 7.680e-5
Identity = 47/136 (34.56%), Postives = 54/136 (39.71%), Query Frame = 1 
Query:  178 CSPNPCKNGATCGVSYIADSTRCKRPVAQCRCAEVGSYVGATCARGCAANRAACGRSFSGYNGNSFTVNDKCCRPSEACLVVPGKYDDWRTECIPKVRPASCAPNPCKNGGTCDVVDYYGDRSIYTCDCAAGWTGS 585
            CSPNPCKNGA+C VS +     CK P           YVG  C      N    G      NG S  V              P  Y     E      P SC  +PC+NGGTC +         YTC CAAG+ G+
Sbjct:   27 CSPNPCKNGASC-VSNLRGEAYCKCPP---------MYVGEYCQH---LNPCHTGAGPRCQNGGSCNVALSATTGPTFMCTCPVGYSASLCEIA---LPNSCDSDPCQNGGTCTLSSL----DNYTCTCAAGFRGN 142
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349615 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835Z128_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YK89_9STRA3.080e-13579.02EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A820REP9_9BILA3.380e-825.68Hypothetical protein n=1 Tax=Rotaria socialis TaxI... [more]
UPI001425A8103.970e-524.93neurogenic locus notch homolog protein 1-like n=1 ... [more]
UPI001403E2096.190e-526.57lactadherin isoform X1 n=4 Tax=Amblyraja radiata T... [more]
UPI0006B0B7397.680e-534.56neurogenic locus Notch protein-like n=1 Tax=Limulu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:319462..324794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349615|estExt_Genemark1.C_Ctg_460051
BRITEko00000,ko00001,ko00002
KEGG ModuleM00682
KEGG Pathwayko01522,ko04320,ko04330,ko04371,ko04658,ko04919,ko05020,ko05165,ko05200,ko05206,ko05224,map01522,map04320,map04330,map04371,map04658,map04919,map05020,map05165,map05200,map05206,map05224
KEGG koko:K02599,ko:K20995
Descriptionnegative regulation of growth rate
COG categoryT
Max annot lvl33208|Metazoa
EggNOG OGsKOG1217@1|root,KOG1217@2759|Eukaryota,38BUP@33154|Opisthokonta,3BAFT@33208|Metazoa,3CRZB@33213|Bilateria
Evalue1.53e-13
Seed ortholog7719.XP_002127912.2
Hectar predicted targeting categoryother localisation
TranscriptId349937
TrackFilteredModels1
ProteinId349615
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349615gene_4596Tribonema minus UTEX_B_3156 geneContig_46 319462..324794 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349615Trimin1|349615|estExt_Genemark1.C_Ctg_460051Tribonema minus UTEX_B_3156 polypeptideContig_46 320112..324794 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4596_6exon_4596_6Tribonema minus UTEX_B_3156 exonContig_46 319462..320127 -
exon_4596_5exon_4596_5Tribonema minus UTEX_B_3156 exonContig_46 320172..320581 -
exon_4596_4exon_4596_4Tribonema minus UTEX_B_3156 exonContig_46 321237..321408 -
exon_4596_3exon_4596_3Tribonema minus UTEX_B_3156 exonContig_46 322393..322483 -
exon_4596_2exon_4596_2Tribonema minus UTEX_B_3156 exonContig_46 323936..324335 -
exon_4596_1exon_4596_1Tribonema minus UTEX_B_3156 exonContig_46 324606..324794 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4596UTR3_4596Tribonema minus UTEX_B_3156 three_prime_UTRContig_46 319462..320111 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4596CDS_4596Tribonema minus UTEX_B_3156 CDSContig_46 324606..324794 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4596 ID=mRNA_4596|Name=jgi.p|Trimin1|349615|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1928bp|location=Sequence derived from alignment at Contig_46:319462..324794- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGTTTGTTCACAGATACACGGAGGCCGAGTGCAGGGTGGAAGCGCG
CACACTGACTGCCAGGCTGAACGATGAGAGCCAAAACTACTTCGAATTCC
CATCGGATGCGTATCTGTCATGCGCCATCAAGAACCCCAAGACGGACCTC
TGCATCCTGCGACCTGCCCAGGATCCCTGCAGCCCCAACCCCTGCAAGAA
CGGCGCGACCTGCGGCGTCTCCTACATTGCGGACTCCACGCGCTGCAAGC
GCCCCGTCGCGCAGTGCAGGTGCGCAGAGGTCGGCAGCTACGTCGGCGCG
ACGTGCGCGCGGGGCTGCGCGGCGAACAGGGCCGCGTGCGGCAGATCTTT
CAGCGGCTACAACGGCAACTCCTTCACAGTCAACGACAAGTGCTGCAGGC
CGTCCGAGGCGTGCCTCGTCGTGCCGGGCAAGTACGACGACTGGCGAACG
GAGTGCATCCCCAAGGTGCGGCCGGCGTCGTGCGCGCCGAACCCGTGCAA
GAACGGCGGCACCTGCGACGTCGTGGACTACTACGGCGACAGGAGCATCT
ACACGTGCGACTGCGCCGCCGGCTGGACCGGCAGTTTCTCAGCAGCGACC
TGCGGGACGGGCACCAAGGTCACCGTGCAGCAGAAGTTTGGCGCCGGCAC
CTGTTCCCTCAACGTGTGCTGCCCTCGAGGCCTCACCGCTCAGCAGTGCA
AGGATGGCGCTAAACAATTCGCGCTGGACCTGACCACCAACGACGAGAAC
TGCTACCAGTTCCCCTCCGACGTCGACGTGTCGTGCAATGTGAAAGACCC
CTCCAAGAGCTTCTGTCTCCTGCACCCCTCCCCCGATCCGTGCAGCCCCA
ATCCGTGCAAGCACGGCGCGCGCTGCACGCTCTCCTACACCGCCGACTCG
CAGGGCTGCCACGGCGCGCAGGTGCAGTGCCACTGCGCGGAAATCGGCAA
CTACGCCGGCAAGCTCTGCGGCGTCACGTGCGCGCCCGACACGGCGCCGT
GCGGCCGCGCGTACTACGACTACGACAGCAACGGCTTCAAGACCAACGAC
AGGTGCTGCAAGCCGTCGGAGGCGTGCGTGCGCGCGCCCGGCAAGTACGG
CTGGTTCACGGTCTGCGTGCCCAAGGCGCGCCCGCTGTCGTGCGACCCGA
ACCCCTGCAAAAATGGCGGCTCGTGCGACACGATTGACTACTACGGCGAT
TCTAACGTCCACGTCTGCAGCTGCACGAGCGGCTGGACCGGCGCCCTGTG
CAGCACGCCCAACCGGCCGCGCGTCTGACCGCCGCCGGAGTCTCGCACGC
GCCGCGCAGGCGAACGTGGCATGCTTGACAGAGGCGCAGTGCGGCGCGCA
GCGCACGGCGGCTGGCACCACAGCCGTGCCTGCCGCTATCTCGGGATCTG
TTGATGCGCAGGACAGCCCCCCCTTGCCCCCCCCTCTCTCCTCGCAACAG
CGCGTGCATCTGTGATTTCGAGCAGCCAGCTTCTGCGCACCTCGCTTGTT
TCGTGAGTCCCGTCAAGCGCCACACCCGCGGCTCGTTATATAGAGCGTTT
TGCGCGATCAGACGCCTGTGCCGTCTTGTGAGCCAAGCGGCTCCTGCGCC
TTTGGCACAAGAACGCGCAACTCAACGAATAGCTCCGCTGCCCCCCCGCT
GCGCGCATTGTCAGAGCTGAACTCTCGCTCGGTGGCAGTCTGAGTGAGCA
AATCGTCAAGGGGCACAAGTGCTCCACTGACGAGAGTGATATTGATTTGA
GTGGCGGTAGAGCGAGAGCGCCGCAGCGCGTCTGTCGCTACACTGTGTGT
GTGTGCATCACATGCGTCAGTGGCGCAGGACAGAGACTGCCAGATGTGTG
CGGTTCGTGGAGTGTTCGCTCAGAGGGCGTCGCAGCCCTCGACTCAGATG
ACGGCATGCATGTACTACTGTCTTGACG
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protein sequence of jgi.p|Trimin1|349615

>Trimin1|349615|estExt_Genemark1.C_Ctg_460051 ID=Trimin1|349615|estExt_Genemark1.C_Ctg_460051|Name=jgi.p|Trimin1|349615|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=426bp
MSFVHRYTEAECRVEARTLTARLNDESQNYFEFPSDAYLSCAIKNPKTDL
CILRPAQDPCSPNPCKNGATCGVSYIADSTRCKRPVAQCRCAEVGSYVGA
TCARGCAANRAACGRSFSGYNGNSFTVNDKCCRPSEACLVVPGKYDDWRT
ECIPKVRPASCAPNPCKNGGTCDVVDYYGDRSIYTCDCAAGWTGSFSAAT
CGTGTKVTVQQKFGAGTCSLNVCCPRGLTAQQCKDGAKQFALDLTTNDEN
CYQFPSDVDVSCNVKDPSKSFCLLHPSPDPCSPNPCKHGARCTLSYTADS
QGCHGAQVQCHCAEIGNYAGKLCGVTCAPDTAPCGRAYYDYDSNGFKTND
RCCKPSEACVRAPGKYGWFTVCVPKARPLSCDPNPCKNGGSCDTIDYYGD
SNVHVCSCTSGWTGALCSTPNRPRV*
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mRNA from alignment at Contig_46:319462..324794-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4596 ID=mRNA_4596|Name=jgi.p|Trimin1|349615|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5333bp|location=Sequence derived from alignment at Contig_46:319462..324794- (Tribonema minus UTEX_B_3156 )
ATGTCGTTTGTTCACAGATACACGGAGGCCGAGTGCAGGGTGGAAGCGCG
CACACTGACTGCCAGGCTGAACGATGAGAGCCAAAACTACTTCGAATTCC
CATCGGATGCGTATCTGTCATGCGCCATCAAGAACCCCAAGACGGACCTC
TGCATCCTGCGACCTGCCCAGGATCCCTGCAGCCCCAACGTAAGCAACTG
CCTGCGTGCGCTTGGCAATCAGCAAGTGGAGTTGTGATGGCATTGTACTT
CATTCACTTCCGCTTGAGGGTGCTGTGACTCAGCCTTTGAGGGTCACTGG
TAGCGTTGTGATGGTGTCCATGGGGGTAACCTGCAAGTGTAGCACCTGTG
CAGCCTCGCTCCCCTTCTTGTGCCGCCCGCAAGCTCCACCGCGACAGCGT
CACTTCAGCTGAACCGCGACTGACGCAACACTACGTTATATCATTGCCCG
CCGCTGCAGCCCTGCAAGAACGGCGCGACCTGCGGCGTCTCCTACATTGC
GGACTCCACGCGCTGCAAGCGCCCCGTCGCGCAGTGCAGGTGCGCAGAGG
TCGGCAGCTACGTCGGCGCGACGTGCGCGCGGGGCTGCGCGGCGAACAGG
GCCGCGTGCGGCAGATCTTTCAGCGGCTACAACGGCAACTCCTTCACAGT
CAACGACAAGTGCTGCAGGCCGTCCGAGGCGTGCCTCGTCGTGCCGGGCA
AGTACGACGACTGGCGAACGGAGTGCATCCCCAAGGTGCGGCCGGCGTCG
TGCGCGCCGAACCCGTGCAAGAACGGCGGCACCTGCGACGTCGTGGACTA
CTACGGCGACAGGAGCATCTACACGTGCGACTGCGCCGCCGGCTGGACCG
GCAGTTTCTGTGGAATCCCAAAGAAGCACGTCTAGTTGGTTCAACAACTA
GGGCCGGCAATGAGCAGTTTGCGGGATGTGCAACAGGTACCATTTGCACT
TTGGTTTGTGTGCAATTGGTGCCGTTGCTGTGCTAGCGAAAGTACTGTCC
TGCATCCCAACCTAGAGCGCGGCGTGCCATTGGTGCAACAAGTTGACGGT
GTATGTTTTGATGGCATGGAGACCTCTGAGGCGACACCGTCCTGAAGCAT
CAGGTTTCCCTGTATAGTTGCTGTGAACAAGTGAAGTATGTGGCAGGCCT
GAGTTGCCCCAGTAGCAGCAGCAGCATACCATGACCAGATGGTGTTCTGT
TTCCTCTGCAGTGTTACACAATTTCCTACGCGTTGTGTCAGTGGTGCGTG
TTGCGAGCACATGATCAGGCGGGCACCACAGTTCAATTTCAACAAGTTGG
CGGATGGCAACAAGTGCTCAAGGGCACTCAAAGAAACAGTTAATCTGTAA
TGGAGTTACTGGTCTCTTTGTGACACATGAGCATGCTGCGTGTTGTGCAC
ATTGCAGTGTTGTGCCTGCTTCGTGCGCAGTTCTGTCGCGCATGTGCCAT
GCTCCCTGACTGCTTGACGGCATACACCTACTGTAGGGCTGCTGCTGTGT
CAGTTGAGTCTCAGTCGACCATACGCAGAGTGATGCACAGCGCTTTGCTG
GACCTTACATGACATCATGAGTCATGGCTTCAGCCAGATGTCACATGACA
AAAACATTTCAGCTTGCATTGATGTGCATCAAGTCCAATCTCGTGTGGTA
TTCACTGCACTTGTGCCACAGCGTGCACTTGTAACATCTGCTTGTCAAAC
CATGAGATTTCATGCTTTTTATGAGTGCACACGTTCCATGCATTGCACAA
ACCTCAGCAGTGCACATACGTAGGAAGGCATGTCGCGCTTGGGATTTTAG
TAATGACTACATAAGTTCTCCTATTTATATTATACATAGTGACCGCTCTC
ATGTCGTATGAGCGCTGAACTAGCACTAGGGCAAATCCCAGGCATTGGTC
GAATGAAAGGGGGTCACGCTGGGGTCGTCTTACTGGCTGGGGGTCAGCCC
CCGGAACAACATAAATAGCCTCGCCCTTGCACCGACCTGGTCTGTGTCTA
GTCGAACGGTCTTACACTGCGTCGTCCGCCGCGGCAACTCACCCACATGA
AGGCTCCGGCGGGTAGGGTCCCCGGAACTTCCGAGGGGAATCTTCAAGTT
GCGAATTACCGACGGCGGGCAGTAACCCCGTCAGCAAGTCGACAATAGGG
CAATGAAGGCGCCTGTGCTCGCTGCGTTTTACCTTGCAGTTGCTCAAGGT
AAGGCGGAAGAAATCCGCTGTGCCACAGAGTTTTCTGAGCCTGTAGTCCA
CAGCTGTGCTTCGCAGAGGCGGAAACTCAACAAATGCACGTTGTGTCCTT
GTGTGTGGCAGCAGCAGCGACCTGCGGGACGGGCACCAAGGTCACCGTGC
AGCAGAAGTTTGGCGCCGGCACCTGTTCCCTCAACGTGTGCTGCCCTCGA
GGGTGAGTACTCTCACCGCTCCATGCTGCGCCCGTCCTATCAATCGACAA
GACAGCAGTGATGCAGTATCCATAGACGTTGTACTGCTGATCATGCGTAT
CATCGGTGTGCAGCCAATGTTGTTGTCTACAGCAAAGCAACCTTCTGCAG
CCGAGTCAACAGGTGCCTGAGAATATCTTTGCTGCGAGGATCATGATCTC
TGCTGCTGCATGGCTCTGTTTCACATTGCACGCAAGAGACGAGGTCACCA
TCCTTGATACGCAAATGCACAATGCTCAAAGAATTGCTGGCTCTCTTCGC
ATTGTACTCAATAGTCGGACGCATTCACCACCTCTTATATGCATGCGCAT
GGTGCACCGTGTGACATCGCCATTGCTTCCGCAGCCACGTGCAAGGCGAT
GCATCATTCATACACCAGACACAAGAACAACATGACATTTGTGTCATGCA
CCTGCACGTTCAAGGCACGGCACCATGATGCACACACTCCATCGCAACAC
CAACCGTCATGTATGATGGCAATCACACAGGGCAGTCATACACGGAGGTA
GTACAACACAATGACGACATTAGACTTGTGGTGCATGATTTGCAGGTATT
ACTCACTTATATGGCATCAGATGCTGCCTCCTACCCTACTTTGTATCTGT
TGAGGTGCATCTGAGCGACAGCATTCGCCACCTTCTATATCCTTTCTGCG
TTGCACCAATAGGGTCTCCCCCCCTTGGTTGAATCATACACACCACCCAA
ACTCGCTTCACTGCCTTACTGTTGCTACCGTAATAATTCTTCATTATGCG
AGAGCACTTGATAGAGCAGCAGGCCAGCACATTGTGATTATGACGCATCT
GAGGAAGTAGGCAAATGCGTAACGTTTTCAATCGAGCTACAATGTACAAT
GTCCGGAGGATACCTCAACAGGCATCGCTCTCCACATTATGTAGCCCATT
CACCGCCATGCGCCGCTGCCACCTGCGCACTCGCAGCCTCACCGCTCAGC
AGTGCAAGGATGGCGCTAAACAATTCGCGCTGGACCTGACCACCAACGAC
GAGAACTGCTACCAGTTCCCCTCCGACGTCGACGTGTCGTGCAATGTGAA
AGACCCCTCCAAGAGCTTCTGTCTCCTGCACCCCTCCCCCGATCCGTGCA
GCCCCAATGTGAGAGCCCCTATGCCGGTTTGCTGCTGAGCAGCAATGCGG
CGCCGCACGCCTGCAGATGACCCCCTTCGAAGCGGTTTTACGCGTGCATA
CATCAGTGTGCAAACACAGAACATAGCGCATCTGCTTGGTGAGCAGGGTG
TCGCTGCCGTCCCGAATCAGATCCTTAATTCTGATTTGGAAGTGCATACT
CCGGTTGCGACAGCATGCCCTTCCGTTCGCAAAGTGCATGCTCCGCAGCG
GCCGCGGAGGCGCGCTGAGCGAAGCGATGCGCAGTAGTACTGTGCTGACC
GCTGCTCGCGCCGCTTGCTCCGTGCCCCACAGTATTGATTTGTGAGTGAA
AGTGTTGACCTGTCGCGGATGCACGTGCTGCGCGTGCAGCACCGCCTCCT
CAGCGCATCTGCTGCTAGCACACAAACTACGTAGCAGCAAGACGTGCCCC
TGCACTGTTATCCCAGTGCAGCACTTCCGCTGTTGCATCGTTTACACACC
ATGTATGGCGTGCGTACGTGCGTCCATGTGGTCAAAGTCGTTGACATTAG
CATTAGGCGCCCTTTCTCGCCCCCCCAGCCCTCACCACCTCACGCCAGGT
CAGCACAGGTCCATGCTCACCACGCACGCCCCCCCCCCCCCCCCCCCCCC
GCCCCCCTGCCAGCCGTGCAAGCACGGCGCGCGCTGCACGCTCTCCTACA
CCGCCGACTCGCAGGGCTGCCACGGCGCGCAGGTGCAGTGCCACTGCGCG
GAAATCGGCAACTACGCCGGCAAGCTCTGCGGCGTCACGTGCGCGCCCGA
CACGGCGCCGTGCGGCCGCGCGTACTACGACTACGACAGCAACGGCTTCA
AGACCAACGACAGGTGCTGCAAGCCGTCGGAGGCGTGCGTGCGCGCGCCC
GGCAAGTACGGCTGGTTCACGGTCTGCGTGCCCAAGGCGCGCCCGCTGTC
GTGCGACCCGAACCCCTGCAAAAATGGCGGCTCGTGCGACACGATTGACT
ACTACGGCGATTCTAACGTCCACGTCTGCAGCTGCACGAGCGGCTGGACC
GGCGCCCTGTGCAGCACGCCCAAGTAGGTAGGTAGGTAGCTGCGCGTGCG
CGCGCGCCGCGCCGCAGCCGGCCGCGCGTCTGACCGCCGCCGGAGTCTCG
CACGCGCCGCGCAGGCGAACGTGGCATGCTTGACAGAGGCGCAGTGCGGC
GCGCAGCGCACGGCGGCTGGCACCACAGCCGTGCCTGCCGCTATCTCGGG
ATCTGTTGATGCGCAGGACAGCCCCCCCTTGCCCCCCCCTCTCTCCTCGC
AACAGCGCGTGCATCTGTGATTTCGAGCAGCCAGCTTCTGCGCACCTCGC
TTGTTTCGTGAGTCCCGTCAAGCGCCACACCCGCGGCTCGTTATATAGAG
CGTTTTGCGCGATCAGACGCCTGTGCCGTCTTGTGAGCCAAGCGGCTCCT
GCGCCTTTGGCACAAGAACGCGCAACTCAACGAATAGCTCCGCTGCCCCC
CCGCTGCGCGCATTGTCAGAGCTGAACTCTCGCTCGGTGGCAGTCTGAGT
GAGCAAATCGTCAAGGGGCACAAGTGCTCCACTGACGAGAGTGATATTGA
TTTGAGTGGCGGTAGAGCGAGAGCGCCGCAGCGCGTCTGTCGCTACACTG
TGTGTGTGTGCATCACATGCGTCAGTGGCGCAGGACAGAGACTGCCAGAT
GTGTGCGGTTCGTGGAGTGTTCGCTCAGAGGGCGTCGCAGCCCTCGACTC
AGATGACGGCATGCATGTACTACTGTCTTGACG
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Coding sequence (CDS) from alignment at Contig_46:319462..324794-

>mRNA_4596 ID=mRNA_4596|Name=jgi.p|Trimin1|349615|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1278bp|location=Sequence derived from alignment at Contig_46:319462..324794- (Tribonema minus UTEX_B_3156 )
ATGTCGTTTGTTCACAGATACACGGAGGCCGAGTGCAGGGTGGAAGCGCG
CACACTGACTGCCAGGCTGAACGATGAGAGCCAAAACTACTTCGAATTCC
CATCGGATGCGTATCTGTCATGCGCCATCAAGAACCCCAAGACGGACCTC
TGCATCCTGCGACCTGCCCAGGATCCCTGCAGCCCCAACCCCTGCAAGAA
CGGCGCGACCTGCGGCGTCTCCTACATTGCGGACTCCACGCGCTGCAAGC
GCCCCGTCGCGCAGTGCAGGTGCGCAGAGGTCGGCAGCTACGTCGGCGCG
ACGTGCGCGCGGGGCTGCGCGGCGAACAGGGCCGCGTGCGGCAGATCTTT
CAGCGGCTACAACGGCAACTCCTTCACAGTCAACGACAAGTGCTGCAGGC
CGTCCGAGGCGTGCCTCGTCGTGCCGGGCAAGTACGACGACTGGCGAACG
GAGTGCATCCCCAAGGTGCGGCCGGCGTCGTGCGCGCCGAACCCGTGCAA
GAACGGCGGCACCTGCGACGTCGTGGACTACTACGGCGACAGGAGCATCT
ACACGTGCGACTGCGCCGCCGGCTGGACCGGCAGTTTCTCAGCAGCGACC
TGCGGGACGGGCACCAAGGTCACCGTGCAGCAGAAGTTTGGCGCCGGCAC
CTGTTCCCTCAACGTGTGCTGCCCTCGAGGCCTCACCGCTCAGCAGTGCA
AGGATGGCGCTAAACAATTCGCGCTGGACCTGACCACCAACGACGAGAAC
TGCTACCAGTTCCCCTCCGACGTCGACGTGTCGTGCAATGTGAAAGACCC
CTCCAAGAGCTTCTGTCTCCTGCACCCCTCCCCCGATCCGTGCAGCCCCA
ATCCGTGCAAGCACGGCGCGCGCTGCACGCTCTCCTACACCGCCGACTCG
CAGGGCTGCCACGGCGCGCAGGTGCAGTGCCACTGCGCGGAAATCGGCAA
CTACGCCGGCAAGCTCTGCGGCGTCACGTGCGCGCCCGACACGGCGCCGT
GCGGCCGCGCGTACTACGACTACGACAGCAACGGCTTCAAGACCAACGAC
AGGTGCTGCAAGCCGTCGGAGGCGTGCGTGCGCGCGCCCGGCAAGTACGG
CTGGTTCACGGTCTGCGTGCCCAAGGCGCGCCCGCTGTCGTGCGACCCGA
ACCCCTGCAAAAATGGCGGCTCGTGCGACACGATTGACTACTACGGCGAT
TCTAACGTCCACGTCTGCAGCTGCACGAGCGGCTGGACCGGCGCCCTGTG
CAGCACGCCCAACCGGCCGCGCGTCTGA
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