Trimin1|349578|estExt_Genemark1.C_Ctg_450106 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349578
Unique Name	Trimin1\|349578\|estExt_Genemark1.C_Ctg_450106
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	804

Homology

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BLAST of jgi.p|Trimin1|349578 vs. uniprot
Match: A0A835YUU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUU6_9STRA)

HSP 1 Score: 1558 bits (4033), Expect = 0.000e+0
Identity = 803/803 (100.00%), Postives = 803/803 (100.00%), Query Frame = 0

Query:    1 MRSRRTSIRSSSTFGGDSCLNVNSASLDRLRDASEHGQELGTENIFYGRHIKVEAPGRDERREWIRSAGLVEYTEQQLTRLGRSGSKKRGADEAAVTSPWCEQQPGANTKRSQRRLRRGGGSIRAADLDAWRAGLQKRRVQTVSAWHRYRQAQLTWLGEHVQSLQEDETGAAGAAELQAGVRWSAWLTLADLLPSSSVWTDWLEPKDLLALSVAGKETHKGTIKSLLRADLRAGLPELTEKRPDALLPLPLLPFVDAEMLANGGVRLVRLTATDQLMLDTAGTLSVVEACGAARAFLVLESAAADITLKRQEENTRANNGGSGGAPRQHRAPADRELLEAWLRARGHKMADYTGVDPAQASVALRDYVTAEAQGGGGRGPKASPTAPATPRERMRRPPGLISLRNAKDQTEDLAWLAAHPVDFCAPRACTQPARPYAVISTLLPASKGGGLGDHLFNNATQFGPFTFGGFADASAAGARKLTARQAKQQIRRNFFGSTSHLDGMGSTSASGCIKLGTKRITFVEAGDALPALKLAEFSSFAKPAGAGGEREGGTRVRSLRHPRSAALRARRGSKHVVNNPIDNAVRAAWRSRGIRFGICELAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHVGDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAAALLKWSLAEVERVMRHQPERREFATEHAPLELLLQLANTTPGQLGFSVARGAAAAXXAAGVPPLRDSSAALSEASARGGVPSCRAARSVRVTGSIVFTDACTYPPDMYL 803
            MRSRRTSIRSSSTFGGDSCLNVNSASLDRLRDASEHGQELGTENIFYGRHIKVEAPGRDERREWIRSAGLVEYTEQQLTRLGRSGSKKRGADEAAVTSPWCEQQPGANTKRSQRRLRRGGGSIRAADLDAWRAGLQKRRVQTVSAWHRYRQAQLTWLGEHVQSLQEDETGAAGAAELQAGVRWSAWLTLADLLPSSSVWTDWLEPKDLLALSVAGKETHKGTIKSLLRADLRAGLPELTEKRPDALLPLPLLPFVDAEMLANGGVRLVRLTATDQLMLDTAGTLSVVEACGAARAFLVLESAAADITLKRQEENTRANNGGSGGAPRQHRAPADRELLEAWLRARGHKMADYTGVDPAQASVALRDYVTAEAQGGGGRGPKASPTAPATPRERMRRPPGLISLRNAKDQTEDLAWLAAHPVDFCAPRACTQPARPYAVISTLLPASKGGGLGDHLFNNATQFGPFTFGGFADASAAGARKLTARQAKQQIRRNFFGSTSHLDGMGSTSASGCIKLGTKRITFVEAGDALPALKLAEFSSFAKPAGAGGEREGGTRVRSLRHPRSAALRARRGSKHVVNNPIDNAVRAAWRSRGIRFGICELAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHVGDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAAALLKWSLAEVERVMRHQPERREFATEHAPLELLLQLANTTPGQLGFSVARGAAAAXXAAGVPPLRDSSAALSEASARGGVPSCRAARSVRVTGSIVFTDACTYPPDMYL
Sbjct:    1 MRSRRTSIRSSSTFGGDSCLNVNSASLDRLRDASEHGQELGTENIFYGRHIKVEAPGRDERREWIRSAGLVEYTEQQLTRLGRSGSKKRGADEAAVTSPWCEQQPGANTKRSQRRLRRGGGSIRAADLDAWRAGLQKRRVQTVSAWHRYRQAQLTWLGEHVQSLQEDETGAAGAAELQAGVRWSAWLTLADLLPSSSVWTDWLEPKDLLALSVAGKETHKGTIKSLLRADLRAGLPELTEKRPDALLPLPLLPFVDAEMLANGGVRLVRLTATDQLMLDTAGTLSVVEACGAARAFLVLESAAADITLKRQEENTRANNGGSGGAPRQHRAPADRELLEAWLRARGHKMADYTGVDPAQASVALRDYVTAEAQGGGGRGPKASPTAPATPRERMRRPPGLISLRNAKDQTEDLAWLAAHPVDFCAPRACTQPARPYAVISTLLPASKGGGLGDHLFNNATQFGPFTFGGFADASAAGARKLTARQAKQQIRRNFFGSTSHLDGMGSTSASGCIKLGTKRITFVEAGDALPALKLAEFSSFAKPAGAGGEREGGTRVRSLRHPRSAALRARRGSKHVVNNPIDNAVRAAWRSRGIRFGICELAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHVGDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAAALLKWSLAEVERVMRHQPERREFATEHAPLELLLQLANTTPGQLGFSVARGAAAAXXAAGVPPLRDSSAALSEASARGGVPSCRAARSVRVTGSIVFTDACTYPPDMYL 803

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BLAST of jgi.p|Trimin1|349578 vs. uniprot
Match: A0A7S3Y1V6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1V6_HETAK)

HSP 1 Score: 73.9 bits (180), Expect = 2.810e-10
Identity = 58/165 (35.15%), Postives = 71/165 (43.03%), Query Frame = 0

Query:  572 GSKHVVNNPIDNAVRAAWRSRGIRFGICELAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHVGDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAA-ALLKWSLAEVERVMRHQPERREFATEHAPLELLLQLANTTP 735
            GS+H+VN PI  AVR  W   GIRF                                      AC         FEL  GDAY IPAG+ HEFQN    +       VAWN LP      AAA +LL +SLAE+   ++ QP+R++ A + AP   LL  A   P
Sbjct:  211 GSRHLVNPPIGPAVRRLWARLGIRF--------------------------------------AC---------FELKKGDAYVIPAGVPHEFQNLEPSVS------VAWNYLPSPGFQSAAACSLLAYSLAELRENLQRQPQRQQEALDFAPEPYLLARAEGHP 322

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349578 vs. uniprot

BLAST of jgi.p|Trimin1|349578 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YUU6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S3Y1V6_HETAK	2.810e-10	35.15	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..118
None	No IPR available	CDD	cd02208	cupin_RmlC-like	coord: 644..669 e-value: 2.92664E-4 score: 38.2326

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_45	contig	Contig_45:820082..830498 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349578	mRNA_6147	Tribonema minus UTEX_B_3156	mRNA	Contig_45 819826..830498 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349578|estExt_Genemark1.C_Ctg_450106 ID=Trimin1|349578|estExt_Genemark1.C_Ctg_450106|Name=jgi.p|Trimin1|349578|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=804bp
MRSRRTSIRSSSTFGGDSCLNVNSASLDRLRDASEHGQELGTENIFYGRH
IKVEAPGRDERREWIRSAGLVEYTEQQLTRLGRSGSKKRGADEAAVTSPW
CEQQPGANTKRSQRRLRRGGGSIRAADLDAWRAGLQKRRVQTVSAWHRYR
QAQLTWLGEHVQSLQEDETGAAGAAELQAGVRWSAWLTLADLLPSSSVWT
DWLEPKDLLALSVAGKETHKGTIKSLLRADLRAGLPELTEKRPDALLPLP
LLPFVDAEMLANGGVRLVRLTATDQLMLDTAGTLSVVEACGAARAFLVLE
SAAADITLKRQEENTRANNGGSGGAPRQHRAPADRELLEAWLRARGHKMA
DYTGVDPAQASVALRDYVTAEAQGGGGRGPKASPTAPATPRERMRRPPGL
ISLRNAKDQTEDLAWLAAHPVDFCAPRACTQPARPYAVISTLLPASKGGG
LGDHLFNNATQFGPFTFGGFADASAAGARKLTARQAKQQIRRNFFGSTSH
LDGMGSTSASGCIKLGTKRITFVEAGDALPALKLAEFSSFAKPAGAGGER
EGGTRVRSLRHPRSAALRARRGSKHVVNNPIDNAVRAAWRSRGIRFGICE
LAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHV
GDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAAALLKWS
LAEVERVMRHQPERREFATEHAPLELLLQLANTTPGQLGFSVARGAAAAA
AAAGVPPLRDSSAALSEASARGGVPSCRAARSVRVTGSIVFTDACTYPPD
MYL*