|
Homology
BLAST of jgi.p|Trimin1|349578 vs. uniprot
Match: A0A835YUU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUU6_9STRA) HSP 1 Score: 1557 bits (4031), Expect = 0.000e+0 Identity = 803/803 (100.00%), Postives = 803/803 (100.00%), Query Frame = 1
Query: 1 MRSRRTSIRSSSTFGGDSCLNVNSASLDRLRDASEHGQELGTENIFYGRHIKVEAPGRDERREWIRSAGLVEYTEQQLTRLGRSGSKKRGADEAAVTSPWCEQQPGANTKRSQRRLRRGGGSIRAADLDAWRAGLQKRRVQTVSAWHRYRQAQLTWLGEHVQSLQEDETGAAGAAELQAGVRWSAWLTLADLLPSSSVWTDWLEPKDLLALSVAGKETHKGTIKSLLRADLRAGLPELTEKRPDALLPLPLLPFVDAEMLANGGVRLVRLTATDQLMLDTAGTLSVVEACGAARAFLVLESAAADITLKRQEENTRANNGGSGGAPRQHRAPADRELLEAWLRARGHKMADYTGVDPAQASVALRDYVTAEAQGGGGRGPKASPTAPATPRERMRRPPGLISLRNAKDQTEDLAWLAAHPVDFCAPRACTQPARPYAVISTLLPASKGGGLGDHLFNNATQFGPFTFGGFADASAAGARKLTARQAKQQIRRNFFGSTSHLDGMGSTSASGCIKLGTKRITFVEAGDALPALKLAEFSSFAKPAGAGGEREGGTRVRSLRHPRSAALRARRGSKHVVNNPIDNAVRAAWRSRGIRFGICELAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHVGDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAAALLKWSLAEVERVMRHQPERREFATEHAPLELLLQLANTTPGQLGFSVARGAAAAXXAAGVPPLRDSSAALSEASARGGVPSCRAARSVRVTGSIVFTDACTYPPDMYL 2409
MRSRRTSIRSSSTFGGDSCLNVNSASLDRLRDASEHGQELGTENIFYGRHIKVEAPGRDERREWIRSAGLVEYTEQQLTRLGRSGSKKRGADEAAVTSPWCEQQPGANTKRSQRRLRRGGGSIRAADLDAWRAGLQKRRVQTVSAWHRYRQAQLTWLGEHVQSLQEDETGAAGAAELQAGVRWSAWLTLADLLPSSSVWTDWLEPKDLLALSVAGKETHKGTIKSLLRADLRAGLPELTEKRPDALLPLPLLPFVDAEMLANGGVRLVRLTATDQLMLDTAGTLSVVEACGAARAFLVLESAAADITLKRQEENTRANNGGSGGAPRQHRAPADRELLEAWLRARGHKMADYTGVDPAQASVALRDYVTAEAQGGGGRGPKASPTAPATPRERMRRPPGLISLRNAKDQTEDLAWLAAHPVDFCAPRACTQPARPYAVISTLLPASKGGGLGDHLFNNATQFGPFTFGGFADASAAGARKLTARQAKQQIRRNFFGSTSHLDGMGSTSASGCIKLGTKRITFVEAGDALPALKLAEFSSFAKPAGAGGEREGGTRVRSLRHPRSAALRARRGSKHVVNNPIDNAVRAAWRSRGIRFGICELAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHVGDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAAALLKWSLAEVERVMRHQPERREFATEHAPLELLLQLANTTPGQLGFSVARGAAAAXXAAGVPPLRDSSAALSEASARGGVPSCRAARSVRVTGSIVFTDACTYPPDMYL
Sbjct: 1 MRSRRTSIRSSSTFGGDSCLNVNSASLDRLRDASEHGQELGTENIFYGRHIKVEAPGRDERREWIRSAGLVEYTEQQLTRLGRSGSKKRGADEAAVTSPWCEQQPGANTKRSQRRLRRGGGSIRAADLDAWRAGLQKRRVQTVSAWHRYRQAQLTWLGEHVQSLQEDETGAAGAAELQAGVRWSAWLTLADLLPSSSVWTDWLEPKDLLALSVAGKETHKGTIKSLLRADLRAGLPELTEKRPDALLPLPLLPFVDAEMLANGGVRLVRLTATDQLMLDTAGTLSVVEACGAARAFLVLESAAADITLKRQEENTRANNGGSGGAPRQHRAPADRELLEAWLRARGHKMADYTGVDPAQASVALRDYVTAEAQGGGGRGPKASPTAPATPRERMRRPPGLISLRNAKDQTEDLAWLAAHPVDFCAPRACTQPARPYAVISTLLPASKGGGLGDHLFNNATQFGPFTFGGFADASAAGARKLTARQAKQQIRRNFFGSTSHLDGMGSTSASGCIKLGTKRITFVEAGDALPALKLAEFSSFAKPAGAGGEREGGTRVRSLRHPRSAALRARRGSKHVVNNPIDNAVRAAWRSRGIRFGICELAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHVGDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAAALLKWSLAEVERVMRHQPERREFATEHAPLELLLQLANTTPGQLGFSVARGAAAAXXAAGVPPLRDSSAALSEASARGGVPSCRAARSVRVTGSIVFTDACTYPPDMYL 803
BLAST of jgi.p|Trimin1|349578 vs. uniprot
Match: A0A7S3Y1V6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1V6_HETAK) HSP 1 Score: 73.9 bits (180), Expect = 3.230e-10 Identity = 58/165 (35.15%), Postives = 71/165 (43.03%), Query Frame = 1
Query: 1714 GSKHVVNNPIDNAVRAAWRSRGIRFGICELAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHVGDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAA-ALLKWSLAEVERVMRHQPERREFATEHAPLELLLQLANTTP 2205
GS+H+VN PI AVR W GIRF AC FEL GDAY IPAG+ HEFQN + VAWN LP AAA +LL +SLAE+ ++ QP+R++ A + AP LL A P
Sbjct: 211 GSRHLVNPPIGPAVRRLWARLGIRF--------------------------------------AC---------FELKKGDAYVIPAGVPHEFQNLEPSVS------VAWNYLPSPGFQSAAACSLLAYSLAELRENLQRQPQRQQEALDFAPEPYLLARAEGHP 322
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | Trimin1|349578|estExt_Genemark1.C_Ctg_450106 |
Max annot lvl | 2759|Eukaryota |
EggNOG OGs | 2EM7G@1|root,2SQY3@2759|Eukaryota |
Evalue | 2.01e-15 |
Seed ortholog | 55529.EKX55213 |
Hectar predicted targeting category | other localisation |
TranscriptId | 349900 |
Track | FilteredModels1 |
ProteinId | 349578 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6147 ID=mRNA_6147|Name=jgi.p|Trimin1|349578|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2668bp|location=Sequence derived from alignment at Contig_45:819826..830498- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGAGGAGCAGGCGCACCAGCATCAGGAGCAGCAGCACTTTCGGAGGTGA TTCTTGCCTCAACGTCAATTCTGCGAGCTTAGATCGCCTGCGGGATGCCA GTGAACATGGCCAGGAGCTGGGCACTGAAAACATCTTCTATGGGCGCCAC ATCAAGGTGGAGGCGCCCGGCAGAGATGAGAGACGGGAATGGATCAGGAG CGCTGGCCTGGTGGAATACACTGAACAGCAGCTCACGCGACTGGGCCGCT CGGGTTCAAAAAAGCGCGGAGCAGATGAGGCAGCGGTAACGTCTCCCTGG TGCGAGCAGCAGCCAGGCGCAAACACCAAGCGCTCACAACGCAGGCTCAG GCGCGGCGGCGGCAGCATTCGCGCCGCAGATCTGGATGCGTGGCGTGCGG GCCTGCAGAAGCGGCGCGTACAGACCGTGAGCGCCTGGCACAGGTACCGG CAGGCGCAACTGACATGGCTCGGCGAGCACGTGCAGTCGCTTCAGGAGGA TGAGACTGGTGCCGCCGGGGCTGCCGAGCTGCAGGCGGGCGTGCGCTGGT CCGCATGGCTCACGCTAGCGGATCTGTTGCCGTCCTCGAGCGTCTGGACG GACTGGCTGGAGCCCAAGGATCTGCTGGCGCTGTCAGTTGCTGGGAAGGA GACGCACAAGGGGACAATAAAGTCGCTGCTGAGGGCAGACCTGCGGGCGG GCCTGCCGGAGCTGACGGAGAAGAGACCAGACGCGCTGCTGCCGCTGCCG CTGCTGCCGTTTGTGGACGCGGAGATGCTTGCGAACGGCGGCGTACGGCT GGTGCGTCTCACGGCGACGGACCAGCTCATGCTAGACACCGCGGGCACGC TCTCCGTGGTCGAGGCGTGCGGCGCGGCGCGCGCCTTCCTCGTGCTCGAG AGCGCCGCCGCGGACATCACGCTCAAGCGGCAGGAGGAGAACACGCGCGC TAACAACGGCGGCAGCGGCGGCGCCCCGCGGCAGCACCGCGCGCCCGCCG ACAGGGAGCTGCTGGAGGCGTGGCTGCGCGCGCGCGGGCACAAGATGGCG GACTACACGGGCGTGGACCCCGCGCAGGCGAGCGTCGCGCTGCGCGACTA CGTGACGGCGGAGGCGCAGGGCGGTGGGGGGCGCGGGCCCAAGGCTTCGC CCACCGCTCCGGCGACGCCGCGCGAGCGCATGCGCCGCCCGCCCGGGCTG ATCTCGCTGCGCAACGCCAAGGACCAGACGGAGGACCTGGCCTGGCTGGC CGCGCACCCGGTCGACTTCTGCGCCCCACGCGCGTGCACGCAGCCCGCAC GCCCGTACGCCGTGATCAGCACGCTGCTGCCCGCCTCCAAGGGCGGCGGC CTCGGCGACCACCTCTTCAACAACGCCACGCAGTTCGGGCCCTTCACGTT CGGCGGCTTCGCCGACGCGAGCGCCGCCGGCGCCAGGAAGCTCACCGCCA GACAGGCCAAGCAGCAGATACGGCGCAACTTCTTCGGCAGCACGTCGCAC CTGGACGGCATGGGCAGCACCAGCGCGTCCGGCTGCATCAAGCTCGGCAC GAAGCGCATCACCTTTGTGGAGGCGGGCGACGCGCTGCCCGCGCTCAAGC TGGCGGAATTCAGCTCCTTCGCCAAGCCAGCGGGCGCGGGTGGGGAACGC GAGGGCGGCACGCGCGTGCGGTCGCTGCGCCACCCCCGCAGCGCTGCGCT GCGCGCTCGACGAGGCTCGAAGCACGTGGTCAACAACCCCATCGACAATG CCGTGCGCGCGGCGTGGCGCTCGCGCGGCATCAGGTTTGGCATTTGCGAG CTCGCTGCGCACGGTGTCAAGCGGCCAGGAGGTCCGACACTGTGCGCTGC GCATGCGGCGGCGGCGCCTCTGCCGCTGCGCACGGCGGTGGAGGTGCTGA GTGCTTGCTCCAAGCCCGGAGCACTGCCGCGCGCCTTTGAGCTCCACGTC GGCGATGCCTACTTCATCCCCGCCGGCATCATCCACGAGTTCCAGAACAC CAGCGACGTTCTCAGGCAAGCACTGCATCATCACGTCGCGTGGAACCTGC TGCCGCACAAGCGCTGCTGCGGCGCGGCGGCTGCGCTGCTCAAGTGGAGC CTCGCGGAGGTGGAGCGCGTTATGCGCCACCAGCCCGAGCGCCGCGAGTT TGCCACGGAGCACGCGCCGCTGGAGCTGCTGCTGCAGCTGGCCAACACGA CGCCGGGGCAGCTGGGCTTCTCCGTGGCGCGCGGCGCCGCTGCTGCTGCT GCCGCCGCTGGCGTCCCGCCGCTGCGCGACTCGAGCGCCGCGCTTTCGGA GGCGAGTGCGCGCGGGGGCGTGCCGTCGTGCCGCGCTGCTCGCAGCGTGC GCGTGACCGGCTCAATCGTCTTCACAGACGCATGCACATACCCGCCTGAC ATGTACCTGTGACGAATGAATAGCTCGTGGGGGCCTGTCAAGGGGCTACT TGAGAGAGAAACTGGCTCGACGTGTGCGCAGCTCAGACCCCGCCGAGCCC CTCAGAGAGCCTGGCACGCCATTACTCCACAAGTTTGCGCATGTATCTAA TGCTCACGACAACGGCATTGCCACCCACTGGGCGACCCATAAAGATCAAG ATGCCTTGCGGCTGACTTGGCGCCTGGACAACGACACGCACATTTCTTAA TGGAGGACTTATACATGC back to topprotein sequence of jgi.p|Trimin1|349578 >Trimin1|349578|estExt_Genemark1.C_Ctg_450106 ID=Trimin1|349578|estExt_Genemark1.C_Ctg_450106|Name=jgi.p|Trimin1|349578|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=804bp
MRSRRTSIRSSSTFGGDSCLNVNSASLDRLRDASEHGQELGTENIFYGRH IKVEAPGRDERREWIRSAGLVEYTEQQLTRLGRSGSKKRGADEAAVTSPW CEQQPGANTKRSQRRLRRGGGSIRAADLDAWRAGLQKRRVQTVSAWHRYR QAQLTWLGEHVQSLQEDETGAAGAAELQAGVRWSAWLTLADLLPSSSVWT DWLEPKDLLALSVAGKETHKGTIKSLLRADLRAGLPELTEKRPDALLPLP LLPFVDAEMLANGGVRLVRLTATDQLMLDTAGTLSVVEACGAARAFLVLE SAAADITLKRQEENTRANNGGSGGAPRQHRAPADRELLEAWLRARGHKMA DYTGVDPAQASVALRDYVTAEAQGGGGRGPKASPTAPATPRERMRRPPGL ISLRNAKDQTEDLAWLAAHPVDFCAPRACTQPARPYAVISTLLPASKGGG LGDHLFNNATQFGPFTFGGFADASAAGARKLTARQAKQQIRRNFFGSTSH LDGMGSTSASGCIKLGTKRITFVEAGDALPALKLAEFSSFAKPAGAGGER EGGTRVRSLRHPRSAALRARRGSKHVVNNPIDNAVRAAWRSRGIRFGICE LAAHGVKRPGGPTLCAAHAAAAPLPLRTAVEVLSACSKPGALPRAFELHV GDAYFIPAGIIHEFQNTSDVLRQALHHHVAWNLLPHKRCCGAAAALLKWS LAEVERVMRHQPERREFATEHAPLELLLQLANTTPGQLGFSVARGAAAAA AAAGVPPLRDSSAALSEASARGGVPSCRAARSVRVTGSIVFTDACTYPPD MYL* back to topmRNA from alignment at Contig_45:819826..830498- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6147 ID=mRNA_6147|Name=jgi.p|Trimin1|349578|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10673bp|location=Sequence derived from alignment at Contig_45:819826..830498- (Tribonema minus UTEX_B_3156 ) ATGAGGAGCAGGCGCACCAGCATCAGGAGCAGCAGCACTTTCGGAGGTGA
TTCTTGCCTCAACGTCAATTCTGCGAGCTTAGATCGCCTGCGGGATGCCA
GTGAACATGGCCAGGAGCTGGGCACTGAAAACATCTTCTATGGGCGCCAC
ATCAAGGTACACTGTGAACCGTTGCTCATCATGGTCAATATGCAAAGCAG
GCTTTCAACTTGTGCGGGCTGTGCCTGCGACAAATACGTTTTTTGAAGAT
GTGTCTACGTTGGCCGTAGAATTGCAAACAGGGGAGATTGTGAATGCGGT
TGGCCATCTTGTCGGATTCTGCTGCTGTGCCCGCAAGACACCTTAGCTTC
ATCTTTCTGCTTTGTGATTTTTGTCGGGCGTACATTCGATTTTCTCAACA
CGTTTGAACGGCTGATCCCCCGCTTTAAGGTGGAGGCGCCCGGCAGAGAT
GAGAGACGGGAATGGATCAGGAGCGCTGGCCTGGTGGAATACACTGAACA
GCAGCTCACGCGACTGGGCCGCTCGGGTTCAAAAAAGCGCGGAGCAGATG
AGGCAGCGGTAACGTCTCCCTGGTGCGAGCAGCAGCCAGGCGCAAACACC
AAGCGCTCACAACGCAGGCTCAGGCGCGGCGGCGGCAGCATTCGCGCCGC
AGATCTGGATGCGTGGCGTGCGGGCCTGCAGAAGCGGCGCGTACAGACCG
TGAGCGCCTGGCACAGGTACCGGCAGGCGCAACTGACATGGCTCGGCGAG
CACGTGCAGTCGCTTCAGGAGGATGAGACTGGTGCCGCCGGGGCTGCCGA
GCTGCAGGTAATTGCGCGCTTTAAGCTCTTCGGGTCATCTACTGCATGCA
ATACCCTGTTGTGATGATCTCTCTGGAACCTGAGTTTGCCTTGACAGGTG
ACGCATGTGCATGATGACGTGAGACGTCTCGCAAGCGCGCCGCTTCTGCT
GGTGCTGGTGCGCTGGTATCATGCCTTCAGCCGCCCGTAGCAGCGTCGGG
CGCCTTCAACCTCTGGAAGAGAATTTGTTCTGCGCACGATCTTGAACTTG
ACTCGTTCAACTTCAGCTTCTTGCGTTGAACACTACATACTGGAACTGTT
TGCAACTGACCTGCCTACCTCACCCTAAGAATTGGGGACTTGCAATGTCT
TCATCGCATGCGGGGCTCCTGCAAACCTGCAGACTCCTCTGATGCAATCT
CATCGCCGGCACGTGCGTCTCATGCACCTCGCGAAGCAGGCGGGCGTGCG
CTGGTCCGCATGGCTCACGCTAGCGGATCTGTTGCCGTCCTCGAGCGTCT
GGACGGACTGGCTGGAGCCCAAGGATCTGCTGGCGCTGTCAGTTGCTGGG
AAGGAGACGCACAAGGGGACAATAAAGTCGCTGCTGAGGGCAGGTGAGGG
ACTGTTCCCAGCCCATCGCATCGCACAGCCGACGCAATTGTCGTGGCTTC
ACAATATCGAGGTGACTGGGGTGCCAATTGGGCACTGTACACGGCGGCCC
CTGGGCCGGCTTGCAACAATCTATCTCCGTGTGCGAGAGACAAAGGAGGC
GATGCTAATCGGGTCGGCAGCGGTCGCTGGGTGCCTGTTGCGCGTCACGA
ACCGTGCGGTTGACTCACGTCACGATCTCAACTTGTCGCCTGTATACCTA
CCCCTGTGTCCGCCGGTGCGCACGCCGTCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCGCTTCGGGCACTCGCCACGTGCCCGCGCTAACGCCGCCTGCCT
CACAGCGTTGCATGCACACTTCCGCTGCTGCATGTCCAGACCTGCGGGCG
GGCCTGCCGGAGCTGACGGAGAAGAGACCAGACGCGCTGCTGCCGCTGCC
GCTGCTGCCGTTTGTGGACGCGGAGATGCTTGCGAACGGCGGCGTACGGC
TGGTGCGTCTCACGGCGACGGACCAGCTCATGCTAGGTGAGTCGCGGACG
GTCTTGTGCGGCGCTGCTTCGCAGGGAGCGATGCAGCAGGCAGCGGCTAA
GAGGCAGCTCGCTGTTCGCACGCGCGTAGCGCCTTCGTCCACCGTCGCAT
TGCAGTCGGTGACTGGTCGCAGTCAGTGCGCAAGGAACGGCGTTGACGGG
CAGGCGCTGGCTGCAGTGACCCATGCGCCGAGCATGCTGGCCCGTTACTG
CCGAATGGCATGACCTGTGAGCTGCCAGCTTGTAGCTTCCTGTCATCAGC
CATCCCATGTTGAAGTGCTTAGCTCGCCTCGCCGCTGTCGTGCCCTATTC
ACCATCCGCTGCGAGGCTGTTACGTGGTGGTAGCGCAGCAGTACATGGTT
TACGGCACGTGCTAAGGCCCTTGTCGGCGCCATCAAGAGGTACGACACTT
GGGCTGGCACCACACAGCACTGACAACTGTTTTGGGTGACGCTGCGGTTC
CGGTCATCAGCAAGGCGAGGTTGCTTTAATCGGTCACAAGTCATGTGCAT
TCATGTTTGCTGAAACCCGAAAGGGCCGCCTCATTGCCAAGCCAGCTAGG
GTGGGACTGCATCTGCTCACAATTGCATCTGCACTATGAGGGACCTCTTG
AAGTTACAACACTAATTCAACTTCACCTGACTTGATGCAGACGGGGCACC
GCATATGCATTGAGGAGGCAGACGACACAGGCATGTATGCAGCTGCTGAC
CTCATTACATGTGCTCAGCAAAGGCACCATCGGCTCTTGATGCTACAAGA
AGATATTGTGATCATCCAATGTTCTCTTGAAACCACACCGTCACATGGTG
TTGACAGCTTTACAATGCTTCGAAGCATGTGCTGATGAGCTGCCAATGGT
GCAGTGAGACGCCACAGCTTCCAGGGCATGTCTCATGCAACATGCTGACG
TCACCAAGAATGCACTGCTCACGCAGCAGCAGTAGGAGCAGCGTGCAGTG
CAGTACACATACGCAGCACTCACCCCCTTGTACGCCAGGCACTCGCTGAG
CCATGCGGCAATATTGCTTGCACGCCCGAACGAGTGCAAACGCCTCAGCA
CCACCGACTACAGCAGCAGCCGGGCGATATGCGGCGCAAGCAAAAACCCC
CAATTCGAGCGACGACACAGGCCGTTGGCACTGACTGCGCGCTCACGCCC
GTGCAGACACCGCGGGCACGCTCTCCGTGGTCGAGGCGTGCGGCGCGGCG
CGCGCCTTCCTCGTGCTCGAGAGCGCCGCCGCGGACATCACGCTCAAGCG
GCAGGAGGAGAACACGCGCGCTAACAACGGCGGCAGCGGCGGCGCCCCGC
GGCAGCACCGCGCGCCCGCCGACAGGGAGCTGCTGGAGGCGTGGCTGCGC
GCGCGCGGGCACAAGATGGCGGACTACACGGGCGTGGACCCCGCGCAGGC
GAGCGTCGCGCTGCGCGACTACGTGACGGCGGAGGCGCAGGGCGGTGGGG
GGCGCGGGCCCAAGGTGAGCTACTGCTGCTGCTCCTGCTGCTGCTGCTGC
TGCTGCTGCTGGTGGTGGTGCTGCTGCTGCTGTCGCTGGCGCTGCTGCTG
CCGCTGCTGCTGGTGCTTCTGCTGCTGGTGCTGCTGCTGCTGCTCTTGCT
GCTGCGGCGCCGCTGCTGCTGCCGCGCGACACGATGGGGCGGCAGGGAGG
GGCGCCGTCTGTGGGGCGGTGTACGCGTTCGCAGTGGCGGTGCTGCACAG
CGCAGCTCGTGTGAAGAGGCGCGGGTGGGGAGGGGTGTGTGGGCGGGTGT
GTGTGTGGCCGGGGGGGGAACTGATGTCCTGGACCTGGATCTGCAGCGCT
GACAAATCGCACGAAAGGCGCAGTGCGAAAGGCTACACGCAGGGGGGTGC
GATGCAGACAGCGAGCACATGGGACGCACGCATGACGCTGCACATCTGTC
TTGCCACGAGCTTGTGACGCTTACTTAGGTGCGACAGGAAATAGTTCAGC
GCGACGTCATGCGGACAGCCCAGCCCATTGGCCGTGCACTAGGATGTACA
CACGAGGAGCTGTGCATTGCCTCCACACCATCCTCTCGTGCGCGGCGTCG
CAGGCTTCGCCCACCGCTCCGGCGACGCCGCGCGAGCGCATGCGCGTCTA
CCGCTTGTAAGTCTGACCGCATTACTCTGTATGCACCGCTGATACACTCT
GCAATCGTCGACAGGGCCCGGAACACACAAACAGCGCTGTGAGCGGTGCT
GCCTTGCTGGTGACGCTCCATAGCAAACATGCACTCTGCTGTACGAAGCT
CAACTGGAACGAACTTCACTCAACCCGCACATGGGTCACTCACGCCTGCA
TGTCATTGCATTGCGTCACTTTAGCCACCAACACAACGCCGCCTTGCCAG
TGGTGCTTCATGACACACGCCATTCGTTTCATGCAGGTCAATGCAAACTG
AGCCCAACTGTCTTGACCCGCATGCATGCAGTGGCGATTGACGCCTCCAC
CCTGTCGCATTGCGCCGTCTCTCCTCCAGCGCCCGCCCGGGCTGATCTCG
CTGCGCAACGCCAAGGACCAGACGGAGGACCTGGCCTGGCTGGCCGCGCA
CCCGGTGAGAGCTGTGCGGAGCGCAGCCATGGGACGCACACCCTTGAACT
TGAACTCAGCATTTCAACTGCCGACAACAGTTACAGGAATGTGTACTTCA
AGCATTGACTGACAGCGATGCACTGCCAGTGGCCACAAAGCCTGCCATGT
GGTGTTTGTTGAACGCACACGGGTTGCCGCGGTCAGGGCGGCGCCTTGCA
GTGTGGTTGTGATTCTCACCGGTACAGCGATACGATTTGTTGCGGGAATG
ATGTAAGCATTGGTTGTGAGGCAAGCGGTATAGTGTGCAAATATGCGCAA
ACTTGACCGGTCAGATATTTACCGTGGTTGGGCACCGCAAGCGTAGGGGG
GCGACAGAGCCAAGCTCTGCACAGCTCTGTGCGGAGGCGGGGTGGTCATA
TCGTGTCCGCCTGCACTGCCCCCCACCGCAGCACCTGCATAGTCAGAGTC
CCCGCCTGCCCTGATGCTTTAATCGAGGAGTCAGCAGCCCACATAAGCAT
CACGTATACACCAGCACGAACTCGCACAACGAGGGGCTGGCGCAGCGCTC
CCGACGCGTTGCAGTGCTCAGCGCGAGCATGCAACAAAAACCCAGCACCT
GCGCCCCATCCCTTCAGTGCCTGAACCGCGCGCGCTCGCACGCCGCTTCA
ACTCATGAGTGCTCTCCGCGCGTCAGTCGCGCCGCGCGCGCCGCAGGTCG
ACTTCTGCGCCCCACGCGCGTGCACGCAGCCCGCACGCCCGTACGCCGTG
CGATGCGCTCACGCGCCGCGCAGCACCAACTCGCGACACGCGCCGACGCA
TTGCATTGACGCTTTTGCGGCCCTTCATGGTGTGCATCGTCCGCGCCCGC
AGGTGATCAGCACGCTGCTGCCCGCCTCCAAGGGCGGCGGCCTCGGCGAC
CACCTCTTCAACAACGCCACGCAGTTCGGGCCCTTCACGTTCGGCGGCTT
CGCCGACGCGAGCGCCGCCGGCGCCAGGAAGCTCACCGCCAGACAGGTGG
GGGGGCGCGCGTGCGAATTGTGGTGGTGGTGGCGCTTGTTGGTGACGTGC
CGCATGGGGGAGGGGCGTGGGGGGGGGGGGGGGGTAAGGCGATGGATGAG
TTTGCTGGCGTCCACGTTGGTGGCAATGTAGCGCTGAGATGGCCGATTGG
ATGGGCTGCGCGGGAGACGGCGTCGCTGCAAACGCGCGCCGCACGCTGCT
GCAGCGAACTTGCGAGCCTAGCAGTGCGTGCGTCACCAGTCAGCGACTGA
GAGCAATGCAATTGGATTCAGCACACTGGTTCAACAAGTTTGTTTGAAGT
GTTTGAAGGCACACGGCCCCCGTGAGGCCAGAAGCTCAAGCGTGTGGTGC
ACAGGGACCGCTCCTGCGAACGCCTGCTTCTTTTGAGCACAGTATATCCA
AGAGACTGCTCGCCCTGTCGCGTACGGCGCACCGCTGCTATTGCCATTGA
GATTTGAATTCCATCACCACCATAAGTTTGCCATTGCGCGCGCTGCGCGG
CCTGCATCAGCATGTCGTTGCCGCAGCTGAAGTACAACCACCATTCTGGC
TCAAGTCGACGGCATGTGCACGGTAGCTTTTCTCCGTATTCATGGACTTG
CTCTTCACGCTGGTTGACCAGTCAAGTCTGTTCACCCATGTGCAGCGTGC
ACGCGTCAGTTGAAGTTGCCCCTGCGCATCACATCTGCCACGCCGTTGAC
ACGCGCCGCCCTGCGCCCACGCCTCGCCGCTGCCGCCGCTCCGATCGTCC
AGGCCAAGCAGCAGATACGGCGCAACTTCTTCGGCAGCACGTCGCACCTG
GTGAGACGCAGTACCCCAAACGTAATGTTCGCAACTGCTCAGCTGCCGAT
TTCAACGACAGCTGAGCCGCTGTTTCGCAGTGGCTATTGTAACAGAGCGA
CAGCGCGCGCTCGCGCTCCGCTCACATCGCGTCCCGTGAGAGGCAGGCGC
GGGACCGTGCTGCTGAGCCGCTGCTGCAGGCGCTGAGCGGTGTGGCAGCC
GTCGCAAACACGTGACACGCTCTCTCGCGCAGCACTTGACGGCGTCACCG
CTGTAGCATTGCTCAGGGGCACTCACTGCAGCCGGCACCGGCCGGTCAGG
TCGATTCCTTGTTCGCTGCCTCTGGCACTTCACTGACGAGCACAGGCAGT
GGCGCGGGCGCAAAAAGAAACGAAATTGGGCTTGATGTTGTGGTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCCGCGCACGTGCCGCACTTTCTGCGGTG
TCACGCGTGAATGGCTCACTGCTTCCGACGGACTCATTTGATCATGTACA
CAGTTTGTGCTTTGCTCCAAGACAGCGGGTAGCGCACTGCACTGGCACAT
TGCTGCTGCGCGGCGTCGGTCGAAGCAGCCGCGTTAGCGTAGGCGATTCA
TGACTGACGTCCACTTGCACATCTTGACCAGCAGGGACACAGGTTGCCCC
TGTGTGCGCAGCGTACTGTTTGCCTGTTACGTTTGTCGCACGCGTTCGTG
GCTCGCATCATGCCCTGCCTCACACGCGCGCAGCTGAGCATTTGCTGCAA
ACGCCTGTGGGCGGTGGGGGGGGGGGCGGGGGGGGAACTTGCGCGCAAAA
GCAACAGTTGAAGTTGCATTATGGTAACTTGCGCATCGCATCATACGCAC
CTGCAGTAAACGTGCAAGCGGCCCTCAACATCACCACCACGCATCCGCCT
GCGCGCGCGTGCAGGACGGCATGGGCAGCACCAGCGCGTCCGGCTGCATC
AAGCTCGGCACGAAGCGCATCACCTTTGTGGAGGCGGGCGACGCGCTGCC
CGCGCTCAAGCTGGCGGAATTCAGCTCCTTCGCCAAGCCAGGTGCGGCGC
CGTGGCAGTTGCGTGCGGCCGCGCTGTGTGCGGAACGTGTGTGCGTGCCT
GTGCGCCCGGAAGCTGGTGCGCTGCGTGGCTGTTGCGCAGCGGGCGCGGG
TGGGGAACGCGAGGGCGGCACGCGCGTGCGGTCGCTGCGCCACCCCCGCA
GCGCTGCGCTGCGCGCTCGACGTCTCAGGGGGGCTCTCATGTTGCCATAC
ACCTGATGTACGAGTGCTGACGCTGAACCATATGCTACGATCTGATGTCC
AGACGTCAACAGGGTGTGCCCGTGCGCCTGTACGCTGGCAGACATGATTG
CGCGTCCAGCACGGATGTCATTCGCCCAGCGTTCTGCCGCATGTGCCACG
GCGCCCTCCTGTGCCGGTCCCACGTTGTAGTGATAACCCGCTCGCATGGG
CATGTCAGAGCCCGGCCTCTTGCGGATGCCGCGAGGCAACTCACCTGAAA
CCCATGCCATATGCAGGAGTGATTGCCGCCCTCCTGCACAGCTCGGCCGC
ATTACGCTCACAGCGCGCGTGCGCGCACGCGTGTGTGTGGCCGAGGCGCC
CCGCTTTGCTCACGCGACGTCCCTCACCCGTGTTTTGTCTGCGCCGGTGC
GCTCTCGCAGGAGGCTCGAAGCACGTGGTCAACAACCCCATCGACAATGC
CGTGCGCGCGGCGTGGCGCTCGCGCGGCATCAGGTTTGGCATGTGAGTGT
TTGCGCGCATCGAGGATCACGGCAACGGAGGGGGAGAGCGCTGATTCAAA
TGTGTGTTGTTGAAGTTGAAGTCGCTAGTAAAGCGAGTTGCTCATGAGAG
CTTCCGCTGCGCCGTGCAGTTGCGAGCTCGCTGCGCACGGTGTCAAGCGG
CCAGGAGGGTGAGAACGCACATGGGATATAGAGCGTGAAGCGCCAGCGCG
CGCCGGTGTACGGCAGTCCGACACTGTGCGCTGCGCATGCGGCGGCGGCG
CCTCTGCCGCTGCGCACGGCGGTGGAGGTGCTGAGTGCTTGCTCCAAGCC
CGGAGCACTGCCGCGCGCGTGAAGCGCCACACGCGCATGCTCGCATCGAG
CCACTGCGATGGCCCGCATGACGTGTTTACAGAGCGTGCGCGCACTGCGT
TCTGGTGGCGCTGCAGTGTTTCAAGAGGGCAGGCCTGCATCAGCATGTCG
AGCCGTGCTGCAGCAAGTTCATCATGCGCCCTCAAGGTCTCATGCAGGGC
AAAAATGCGGCAGCGATCGTTGGCAGGACAAGAAGCGCCCCTGCGCAGAG
GCTTCGCATGCCGCCTCTGGCTTGTGGTGTGATGGCATGTGCTTTGTTTG
TGCCGCGGACGTGGCAAGCACGTGGATGCTGGAGAAAATGATGCGTATGT
GCTGTCCAGTTCTTGACACCGCGCCGTTCAGCGACGATCGCAGAAGGCGC
TGCAGCGCTAGGTAATGCAGTGACCGCCGGTCATCAGGACACGCGCACCA
CATGTATTTGATCGCATGGCAGTGCAGGGGGCGGGCACGGCAGCACTGGT
GGCGGACAGCGCAGTCGCAGTCGCAGTCTGGCAGGCCGCTACTTCGCGTC
ATGAAATAATGTCTGCTATATAACGGGTCCATGGTGGTTCCATGCTGCTG
GCCGCTACGCTTTCCCATGGCACAGCGATAAACCGGCGGCCGCTAACGCA
TGTGTCTGTGCTCTTTGCGCTGCTGTCAGCTCTGACCTTACGTGACTGCC
TACGGTCTCTGTTGCCAGCTTTGAGCTTACGCGTCTGTCTGTGGTCTCTG
CGCTGTTGTCAGCTTTGAGCTCCACGTCGGCGATGCCTACTTCATCCCCG
CCGGCATCATCCACGAGTTCCAGAACACCAGCGACGTTCTCAGGCAAGCA
CTGCATCATCAGTTGCGAGAAGTTCCGCTTTGGCAAAAGACAATCATTGT
GTGTAGTGTGGCCCTGCGCGTATGCGTTGAGCAATGTGGCATGCACAGGC
ACCCGCATCTGGCTCCGTTGCGCGCCAACAGCGGTGTCCTGTCGACGCTC
CGCCGGTTTGCAGCAGCTTGTCTCGCCTCCAACAACGCGCCCCCGAGCGA
CTGTGCATGCGCACCCGATCAAGTGCTGCCAATCCAAACCTGCCACACTT
CTGCACAGCTGTTTGGAACAGGAAAGTGTTCCTCACCGGACAATTTGCGC
TGTTGCAGCCATGTATCGCGCATGTCCCTGGTGGGGAGTCTGTCTCTGCT
CCCGTGGCGGGCGCACCTTTGCTTGCGCCTTATTTGCTGCAGTGTACGTG
ATAGACAGTGCGCGCGTCGTGCAGTGGCATCTCATCTACTCGTGGCAAGG
GCGACAGTCGCATTGATGATGCTCTGAGGCCAGCTTTAGGACAAAACTCA
TGTCGTGGGCGCCATACTAACAGGACGGTCAGCCTGCTGCGTGTGACAGC
TTCGCGGCCAGGCAGCTGTGCCAGCGCACGACGTCTCCTCCAGAGTGCCC
GCTGCTTGCATACAAACTATCACCAGTATGTGTACGCCTGCCTGCTGTTG
CCATCGCGGCGGCACAACTCTCAACCCCCCCCCTCGCTCCCCGCCCCGCA
GCGTCGCGTGGAACCTGCTGCCGCACAAGCGCTGCTGCGGCGCGGCGGCT
GCGCTGCTCAAGTGGAGCCTCGCGGAGGTGGAGCGCGTTATGCGCCACCA
GCCCGAGCGCCGCGAGTTTGCCACGGAGCACGCGCCGCTGGAGCTGCTGC
TGCAGCTGGCCAACACGACGCCGGGGCAGCTGGGCTTCTCGTAGCTCTGT
GCCGCACGCCGCGCGCGTGAGCGTTTTGCTTTCGCGCTCTTGCAAGGCCG
CTGCCGCAGCTTGCAGCGTGGCGCGCGGCGCCGCTGCTGCTGCTGCCGCC
GCTGGCGTCCCGCCGCTGCGCGACTCGAGCGCCGCGCTTTCGGAGGCGAG
TGCGCGCGGGGGCGTGCCGTCGTGCCGCGCTGCTCGCAGCGTGCGCGTGA
CCGGCTCAATCGTCTTCACAGACGCATGCACATGTGCGCGACCGCAGTTG
TTCACGAGCGTGGCCCGGTGCTGCTGCCGCGGCCCGCGAAGCAGACCCGC
CTGACATGTACCTGTGACGAATGAATAGCTCGTGGGGGCCTGTCAAGGGG
CTACTTGAGAGAGAAACTGGCTCGACGTGTGCGCAGCTCAGACCCCGCCG
AGCCCCTCAGAGAGCCTGGCACGCCATTACTCCACAAGTTTGCGCATGTA
TCTAATGCTCACGACAACGGCATTGCCACCCACTGGGCGACCCATAAAGA
TCAAGATGCCTTGCGGCTGACTTGGCGCCTGGACAACGACACGCACATTT
CTTAATGGAGGACTTATACATGC back to topCoding sequence (CDS) from alignment at Contig_45:819826..830498- >mRNA_6147 ID=mRNA_6147|Name=jgi.p|Trimin1|349578|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2412bp|location=Sequence derived from alignment at Contig_45:819826..830498- (Tribonema minus UTEX_B_3156 ) ATGAGGAGCAGGCGCACCAGCATCAGGAGCAGCAGCACTTTCGGAGGTGA TTCTTGCCTCAACGTCAATTCTGCGAGCTTAGATCGCCTGCGGGATGCCA GTGAACATGGCCAGGAGCTGGGCACTGAAAACATCTTCTATGGGCGCCAC ATCAAGGTGGAGGCGCCCGGCAGAGATGAGAGACGGGAATGGATCAGGAG CGCTGGCCTGGTGGAATACACTGAACAGCAGCTCACGCGACTGGGCCGCT CGGGTTCAAAAAAGCGCGGAGCAGATGAGGCAGCGGTAACGTCTCCCTGG TGCGAGCAGCAGCCAGGCGCAAACACCAAGCGCTCACAACGCAGGCTCAG GCGCGGCGGCGGCAGCATTCGCGCCGCAGATCTGGATGCGTGGCGTGCGG GCCTGCAGAAGCGGCGCGTACAGACCGTGAGCGCCTGGCACAGGTACCGG CAGGCGCAACTGACATGGCTCGGCGAGCACGTGCAGTCGCTTCAGGAGGA TGAGACTGGTGCCGCCGGGGCTGCCGAGCTGCAGGCGGGCGTGCGCTGGT CCGCATGGCTCACGCTAGCGGATCTGTTGCCGTCCTCGAGCGTCTGGACG GACTGGCTGGAGCCCAAGGATCTGCTGGCGCTGTCAGTTGCTGGGAAGGA GACGCACAAGGGGACAATAAAGTCGCTGCTGAGGGCAGACCTGCGGGCGG GCCTGCCGGAGCTGACGGAGAAGAGACCAGACGCGCTGCTGCCGCTGCCG CTGCTGCCGTTTGTGGACGCGGAGATGCTTGCGAACGGCGGCGTACGGCT GGTGCGTCTCACGGCGACGGACCAGCTCATGCTAGACACCGCGGGCACGC TCTCCGTGGTCGAGGCGTGCGGCGCGGCGCGCGCCTTCCTCGTGCTCGAG AGCGCCGCCGCGGACATCACGCTCAAGCGGCAGGAGGAGAACACGCGCGC TAACAACGGCGGCAGCGGCGGCGCCCCGCGGCAGCACCGCGCGCCCGCCG ACAGGGAGCTGCTGGAGGCGTGGCTGCGCGCGCGCGGGCACAAGATGGCG GACTACACGGGCGTGGACCCCGCGCAGGCGAGCGTCGCGCTGCGCGACTA CGTGACGGCGGAGGCGCAGGGCGGTGGGGGGCGCGGGCCCAAGGCTTCGC CCACCGCTCCGGCGACGCCGCGCGAGCGCATGCGCCGCCCGCCCGGGCTG ATCTCGCTGCGCAACGCCAAGGACCAGACGGAGGACCTGGCCTGGCTGGC CGCGCACCCGGTCGACTTCTGCGCCCCACGCGCGTGCACGCAGCCCGCAC GCCCGTACGCCGTGATCAGCACGCTGCTGCCCGCCTCCAAGGGCGGCGGC CTCGGCGACCACCTCTTCAACAACGCCACGCAGTTCGGGCCCTTCACGTT CGGCGGCTTCGCCGACGCGAGCGCCGCCGGCGCCAGGAAGCTCACCGCCA GACAGGCCAAGCAGCAGATACGGCGCAACTTCTTCGGCAGCACGTCGCAC CTGGACGGCATGGGCAGCACCAGCGCGTCCGGCTGCATCAAGCTCGGCAC GAAGCGCATCACCTTTGTGGAGGCGGGCGACGCGCTGCCCGCGCTCAAGC TGGCGGAATTCAGCTCCTTCGCCAAGCCAGCGGGCGCGGGTGGGGAACGC GAGGGCGGCACGCGCGTGCGGTCGCTGCGCCACCCCCGCAGCGCTGCGCT GCGCGCTCGACGAGGCTCGAAGCACGTGGTCAACAACCCCATCGACAATG CCGTGCGCGCGGCGTGGCGCTCGCGCGGCATCAGGTTTGGCATTTGCGAG CTCGCTGCGCACGGTGTCAAGCGGCCAGGAGGTCCGACACTGTGCGCTGC GCATGCGGCGGCGGCGCCTCTGCCGCTGCGCACGGCGGTGGAGGTGCTGA GTGCTTGCTCCAAGCCCGGAGCACTGCCGCGCGCCTTTGAGCTCCACGTC GGCGATGCCTACTTCATCCCCGCCGGCATCATCCACGAGTTCCAGAACAC CAGCGACGTTCTCAGGCAAGCACTGCATCATCACGTCGCGTGGAACCTGC TGCCGCACAAGCGCTGCTGCGGCGCGGCGGCTGCGCTGCTCAAGTGGAGC CTCGCGGAGGTGGAGCGCGTTATGCGCCACCAGCCCGAGCGCCGCGAGTT TGCCACGGAGCACGCGCCGCTGGAGCTGCTGCTGCAGCTGGCCAACACGA CGCCGGGGCAGCTGGGCTTCTCCGTGGCGCGCGGCGCCGCTGCTGCTGCT GCCGCCGCTGGCGTCCCGCCGCTGCGCGACTCGAGCGCCGCGCTTTCGGA GGCGAGTGCGCGCGGGGGCGTGCCGTCGTGCCGCGCTGCTCGCAGCGTGC GCGTGACCGGCTCAATCGTCTTCACAGACGCATGCACATACCCGCCTGAC ATGTACCTGTGA back to top
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