mRNA_5701 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349414
Unique Name	mRNA_5701
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349414 vs. uniprot
Match: A0A835Z0T0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T0_9STRA)

HSP 1 Score: 787 bits (2032), Expect = 1.500e-286
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 1

Query:    1 MSVATKAASVLTRQQKRTSPSPPLDQDPDMMDDDSAWADAGMADSYKSSVAASDNGIVSEIDPGDAEAAERERQRGEENMAAEDDNEVRETTSDESSAEEGQELVVEVVRRRFGLEVPPTPIPYMPGLVHEDLKLTKDSLRSGGDALQSFVAAMGWTSALQAVRGAKDEGAWNPVEGQAEQQQQQDVPASPLATVLKTASSQQDGTCSTEQRDMNRSEQLRIEGRKKLDALIETCAATVSGVTLSGAAMRNLYQAALNEDRRLGRLRRKQRAVAAEILKIKEKMRPEQEDEDGIVDRAAGYSPSAAPDMAEEDPYDDLAAAEEFEETAEAPFKPTVDAAAGTGVIDVEVMNATGEMISTNGAAADVRPPVEEDGHELRDDRVNGLQELQDLLGLDHLLLLCRDAVCVREHLSTVPTIYRLYGSCA 1275
            MSVATKAASVLTRQQKRTSPSPPLDQDPDMMDDDSAWADAGMADSYKSSVAASDNGIVSEIDPGDAEAAERERQRGEENMAAEDDNEVRETTSDESSAEEGQELVVEVVRRRFGLEVPPTPIPYMPGLVHEDLKLTKDSLRSGGDALQSFVAAMGWTSALQAVRGAKDEGAWNPVEGQAEQQQQQDVPASPLATVLKTASSQQDGTCSTEQRDMNRSEQLRIEGRKKLDALIETCAATVSGVTLSGAAMRNLYQAALNEDRRLGRLRRKQRAVAAEILKIKEKMRPEQEDEDGIVDRAAGYSPSAAPDMAEEDPYDDLAAAEEFEETAEAPFKPTVDAAAGTGVIDVEVMNATGEMISTNGAAADVRPPVEEDGHELRDDRVNGLQELQDLLGLDHLLLLCRDAVCVREHLSTVPTIYRLYGSCA
Sbjct:    1 MSVATKAASVLTRQQKRTSPSPPLDQDPDMMDDDSAWADAGMADSYKSSVAASDNGIVSEIDPGDAEAAERERQRGEENMAAEDDNEVRETTSDESSAEEGQELVVEVVRRRFGLEVPPTPIPYMPGLVHEDLKLTKDSLRSGGDALQSFVAAMGWTSALQAVRGAKDEGAWNPVEGQAEQQQQQDVPASPLATVLKTASSQQDGTCSTEQRDMNRSEQLRIEGRKKLDALIETCAATVSGVTLSGAAMRNLYQAALNEDRRLGRLRRKQRAVAAEILKIKEKMRPEQEDEDGIVDRAAGYSPSAAPDMAEEDPYDDLAAAEEFEETAEAPFKPTVDAAAGTGVIDVEVMNATGEMISTNGAAADVRPPVEEDGHELRDDRVNGLQELQDLLGLDHLLLLCRDAVCVREHLSTVPTIYRLYGSCA 425

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349414 vs. uniprot

BLAST of jgi.p|Trimin1|349414 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z0T0_9STRA	1.500e-286	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_42	contig	Contig_42:676870..690581 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349414\|estExt_Genemark1.C_Ctg_420096
Hectar predicted targeting category	other localisation
TranscriptId	349736
Track	FilteredModels1
ProteinId	349414

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349414	gene_5701	Tribonema minus UTEX_B_3156	gene	Contig_42 676870..690581 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349414	Trimin1\|349414\|estExt_Genemark1.C_Ctg_420096	Tribonema minus UTEX_B_3156	polypeptide	Contig_42 676870..690581 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5701_1	exon_5701_1	Tribonema minus UTEX_B_3156	exon	Contig_42 676870..677133 +
exon_5701_2	exon_5701_2	Tribonema minus UTEX_B_3156	exon	Contig_42 677537..677694 +
exon_5701_3	exon_5701_3	Tribonema minus UTEX_B_3156	exon	Contig_42 678135..678339 +
exon_5701_4	exon_5701_4	Tribonema minus UTEX_B_3156	exon	Contig_42 679588..679661 +
exon_5701_5	exon_5701_5	Tribonema minus UTEX_B_3156	exon	Contig_42 680018..680180 +
exon_5701_6	exon_5701_6	Tribonema minus UTEX_B_3156	exon	Contig_42 680743..680899 +
exon_5701_7	exon_5701_7	Tribonema minus UTEX_B_3156	exon	Contig_42 681197..681317 +
exon_5701_8	exon_5701_8	Tribonema minus UTEX_B_3156	exon	Contig_42 689753..689778 +
exon_5701_9	exon_5701_9	Tribonema minus UTEX_B_3156	exon	Contig_42 690472..690581 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5701	CDS_5701	Tribonema minus UTEX_B_3156	CDS	Contig_42 676870..677133 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_42:676870..690581+
coding sequence from alignment at Contig_42:676870..690581+

spliced messenger RNA

>mRNA_5701 ID=mRNA_5701|Name=jgi.p|Trimin1|349414|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1278bp|location=Sequence derived from alignment at Contig_42:676870..690581+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAGTGGCGACAAAGGCAGCAAGTGTCCTGACGCGTCAGCAGAAGCG
GACATCGCCTTCCCCGCCGCTTGATCAAGACCCAGACATGATGGACGACG
ACAGCGCATGGGCGGACGCTGGCATGGCGGACAGCTACAAGTCATCAGTC
GCCGCAAGTGACAATGGCATTGTGTCTGAGATAGACCCCGGGGATGCCGA
AGCTGCAGAGCGGGAGCGGCAGAGAGGGGAGGAGAACATGGCGGCAGAAG
ATGACAATGAAGTGCGGGAAACAACTTCTGATGAAAGCAGTGCAGAGGAG
GGCCAAGAGCTGGTCGTGGAAGTTGTCAGGAGGCGATTTGGCCTGGAGGT
GCCACCAACGCCAATCCCCTACATGCCTGGATTGGTGCATGAGGACTTGA
AGTTGACCAAGGACAGCCTCAGGAGTGGCGGGGACGCCCTGCAGTCTTTT
GTGGCTGCCATGGGATGGACATCTGCTCTACAAGCTGTTAGAGGAGCCAA
GGACGAAGGTGCCTGGAACCCTGTTGAGGGCCAGGCTGAGCAGCAGCAGC
AGCAGGATGTGCCGGCCTCACCTCTGGCCACCGTGCTCAAGACAGCATCA
TCACAGCAGGATGGCACGTGCTCGACGGAGCAGCGCGACATGAACCGCTC
GGAGCAGCTCAGGATTGAGGGCAGGAAGAAGCTTGATGCGCTGATCGAAA
CGTGTGCTGCCACCGTCTCTGGTGTCACGTTATCTGGAGCTGCAATGCGC
AACCTGTACCAGGCAGCTCTCAATGAGGACCGACGCCTAGGACGGCTTAG
GCGGAAGCAACGCGCGGTGGCAGCAGAGATACTCAAAATCAAGGAGAAGA
TGCGCCCTGAGCAGGAAGATGAAGATGGCATTGTCGATAGAGCTGCAGGG
TACTCTCCAAGCGCCGCACCAGACATGGCAGAGGAGGATCCGTATGACGA
CCTGGCTGCTGCTGAGGAATTTGAGGAAACAGCAGAGGCGCCATTCAAGC
CGACGGTAGACGCTGCAGCTGGCACGGGGGTCATTGATGTGGAGGTGATG
AACGCCACTGGGGAGATGATCAGCACCAACGGTGCGGCAGCTGACGTCAG
GCCGCCTGTTGAAGAGGACGGGCATGAACTACGCGACGACAGGGTCAATG
GCCTGCAGGAGCTCCAAGACCTCTTGGGGCTCGACCACCTGCTGCTGCTG
TGCCGCGATGCAGTCTGCGTGCGTGAGCACCTTTCAACTGTGCCTACCAT
CTATCGCCTCTACGGCAGCTGTGCCTAA

protein sequence of jgi.p|Trimin1|349414

>Trimin1|349414|estExt_Genemark1.C_Ctg_420096 ID=Trimin1|349414|estExt_Genemark1.C_Ctg_420096|Name=jgi.p|Trimin1|349414|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=426bp
MSVATKAASVLTRQQKRTSPSPPLDQDPDMMDDDSAWADAGMADSYKSSV
AASDNGIVSEIDPGDAEAAERERQRGEENMAAEDDNEVRETTSDESSAEE
GQELVVEVVRRRFGLEVPPTPIPYMPGLVHEDLKLTKDSLRSGGDALQSF
VAAMGWTSALQAVRGAKDEGAWNPVEGQAEQQQQQDVPASPLATVLKTAS
SQQDGTCSTEQRDMNRSEQLRIEGRKKLDALIETCAATVSGVTLSGAAMR
NLYQAALNEDRRLGRLRRKQRAVAAEILKIKEKMRPEQEDEDGIVDRAAG
YSPSAAPDMAEEDPYDDLAAAEEFEETAEAPFKPTVDAAAGTGVIDVEVM
NATGEMISTNGAAADVRPPVEEDGHELRDDRVNGLQELQDLLGLDHLLLL
CRDAVCVREHLSTVPTIYRLYGSCA*

mRNA from alignment at Contig_42:676870..690581+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5701 ID=mRNA_5701|Name=jgi.p|Trimin1|349414|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13712bp|location=Sequence derived from alignment at Contig_42:676870..690581+ (Tribonema minus UTEX_B_3156 )
ATGTCAGTGGCGACAAAGGCAGCAAGTGTCCTGACGCGTCAGCAGAAGCG
GACATCGCCTTCCCCGCCGCTTGATCAAGACCCAGACATGATGGACGACG
ACAGCGCATGGGCGGACGCTGGCATGGCGGACAGCTACAAGTCATCAGTC
GCCGCAAGTGACAATGGCATTGTGTCTGAGATAGACCCCGGGGATGCCGA
AGCTGCAGAGCGGGAGCGGCAGAGAGGGGAGGAGAACATGGCGGCAGAAG
ATGACAATGAAGTGGTAAGCCAGGCTGCATGACGCGTCTTTTGTGACTGT
CCAGAGGCTCTTTTCACATCTGAAGGCAGCAGAGTTTCTCTATGCTGGTG
GTCACAAGTTGGTGCTCAGTGGTGCTCGACATGAAACTCCAGAGTGATGT
GCATGAGTCGCTGTACAAGGTGGAGAAACTCTCAAAGCTGCCGTCGATAT
TCTTTTATTTTTTTGTCTAAAGCTTCACAGTTTCTGTATCAGATATCAGT
CAGTGCATTCTGGCATCAAGTCTTGACCTGAACTTCAAGCAGAGCACTGC
AGCACAGTCCTCTTCAATCAATTTATGCCATTGATGATGCTGGGGTGTCG
TCCTGTTGGGTCGCTAGATAGATTATCATGTATGCTTGTTCTCACACCAT
TGCTTGCCTGATTGCAGCGGGAAACAACTTCTGATGAAAGCAGTGCAGAG
GAGGGCCAAGAGCTGGTCGTGGAAGTTGTCAGGAGGCGATTTGGCCTGGA
GGTGCCACCAACGCCAATCCCCTACATGCCTGGATTGGTGCATGAGGACT
TGAAGTTGACCAAGGACAGCCTCAGGTATGTGCCTGCACGTCATGCCAGC
TGCCTCAATACTTTGTGACGTATTTGCAGTAGCTCACAAGCAATCATGTC
TGCGTCAGTGCCAAAGCTGATAGGATGTACATAGGTGTCACATACTCTCA
CTTCGCCCTCGGGACTTTCATACCGCGCAAGCAGTATATCATTTATAGCT
GGCCACATGTGGTCAAGCAAACGACTGCATGCAAGGCGGCGGTGCAGCAG
CCGTGTGCGTCAACGCATCTCACAACTTGTGCATCCAGCCTCAAGTGTGT
CTTGATCGGCCCAAGCATTAGATTGCAAAGTCTGTCAAAGGCAGTGTGCA
GTGTTGTTTGTGTCAAACATCACACAGCAGTGGAACACTTGAGTAGCATA
ATATTTGGCATTGAAATTGGTTGCTTGTACTCTAGTAATTCGCACCTCGT
TGCAATGTTGCGCAGGAGTGGCGGGGACGCCCTGCAGTCTTTTGTGGCTG
CCATGGGATGGACATCTGCTCTACAAGCTGTTAGAGGAGCCAAGGACGAA
GGTGCCTGGAACCCTGTTGAGGGCCAGGCTGAGCAGCAGCAGCAGCAGGA
TGTGCCGGCCTCACCTCTGGCCACCGTGCTCAAGACAGCATCATCACAGC
AGGATGGCACGTGCTCGACGGTATGTCATACATACACCTTACCAAGGCGA
CCTGCGCACTGACGTGCAGCACTTGTGGGCAACTGCATGGCATAACACAT
GTGCTTAGCAGTTGCTTGTTCATCTTACTGTACATACTAGTTTTGCGGCA
AGTCTTCCACAAAGAGTCGCTCACAAGAAGTGTGGCTATTCTGAAGGCAA
ATGGCTGTGAATACTATCTGTTGCGTCTCAATGCACAATTGAGATGCTTT
GAAGCATTTTGTGCTCAGTTGGTAATGCTGTAATCAGGTCCATAAGTCTC
ACAGTGATCAGAAGCAATGCAATGCCCTGGTCTGTGCATTGACATGTGCA
TCCGTCCCTGCTTTGCACCTCTCGGTGGCATGGACAGCTCGCAGATGCAG
TGCTGACTCATTGAGCTTTTCAATGGCCTCATGTATTCACCCTTTGCTTG
AAGATGTGACATGCGTCAATTGATGTGTTTTGGTTCCTGCAGCGGCACCT
TGTGGCCCAGCTTGAGATGTTGGTGGGCATCTGGGCAGAGCAGCATTACA
GCGGCAGCCGTGCAGTCATCAAGCAGCTCAGACCGGCGGAGCAGCAGGCC
TATGCATTCCTGCTGCGAACTTGCCAGGCTGGAGTGGAGGCAGCACTAAG
GGAAGCCAGCACAACGACACAGCTGCAAGAGGCAAGTTTGTCATGTTGGT
TGGCAGAGTGGAAATTCTGTGTGTTGCTGTCACATGTGGTGAGGGCTCAG
CTTTTTTTGGTTCAGAAATGTAGACGTAAGGATTTGATATGGTCACAAGC
AACAACAACTCATGAGCTGCCAAGTTATTTCAAGCAACTCGCTATGTTGG
TGCTTACAGCATCACATGCCTGTGTGATGTGTTCATGTAGGCATGCCTGT
TGTTGCCTTTGTGTACAGTTGTGCACCTTTTGTCCCGGACCACGGCTTTG
GTTACCATTCGGTACAGCATGTTGGTCGAAGTAGCTTCTGTGAACAGAGT
TGAACGCTGCAGCTTGTTTTTCACTAGACACACGTTCCATGACTGTCACC
TATCAATGACATTGTCATGGTGCAATGGCGTTTGCAACAGCAGTAGCAGT
CTCACCTGCTGCATTAACCGTGCTCAAGGCCTCTCTTCAGCAACGTGTCA
TTGAACCCGCAGCTGACCGTGTTGGTTGCTGCATGCTGCAAACAATTTGT
TTCCGCAGCCTGACAGGGAAACGCTGCGGGTGGCATACCTTCGCGCTCGC
CTTGCCATGTGCATGGAGGAGCAGCGCGACATGAACCGCTCGGAGCAGCT
CAGGATTGAGGGCAGGAAGAAGCTTGATGCGCTGATCGAAACGTGAGGAA
CAATGTTAATGCACGATGCTCACAAGGTCTGCAATGACGCTGCTCACTCT
TTCTGGTATCAACCATATGATGACTTGTGGCAAGTGGCTGCGCTACCTGC
AGCCATTCGTCAACTGGCAGTGGCACATCAGCAGCTTCAAAAGGCCCCTG
GTGCAACTGCTGCCATTTTGACTCGTTGTTTAACACGAAGGATGTTGCTG
ACACGCCATAGTGCCTGCTTGCGGAACTCGAGGAATTTCAATACTGGAAT
CATGGTGAGCCTGCTTGCAGAGCTTGTCAAGTGGTGCGAAAATTGTTGTG
GCAAGGCAGCACAGGCTAACAGTCATACATCCATGCTGCTCTGTACAGGT
GTGCTGCCACCGTCTCTGGTGTCACGTTATCTGGAGCTGCAATGCGCAAC
CTGTACCAGGCAGCTCTCAATGAGGACCGACGCCTAGGACGGCTTAGGCG
GAAGCAACGCGCGGTGGCAGCAGAGATACTCAAAATCAAGGAGAAGATGC
GCCCTGAGCAGGTGGAGAAGCTGTTGATAGACTGACTGAGGGCTGCGGTG
TTGATTGCGCGACAATGTATATCATTTGCTGTGCTATTCATTGCCACCAG
ATTATCATCGATGCTTTCTTGTGGACTTGAGCAATCACCAACAGGTTACA
GGGACAAGTTGCAGATTGTCAGTCAAAGGTACCCTTTTCCTTTTCTTTTC
TTTTTTTTTTCCCCCAAGATCCAACAAGACAAGTTGAATAAATCATTATG
GATGTTCAGCATTATCAGTTTATTCCTGCTGGTGCTTGTGCGTGTATTGT
ATGCACACCCAGTGTACCATGTTATTTCACTGTTTGCTCAAGTGTAACGG
GAAATTCTAGCACGAAACAGTGATAACCGTATGTGAGGCTGACGCGTCAC
ATTTTTCTTGCCATTGGCTTGTGGTCTGCATTGTGCAGCTATGCTCAAGA
TTGCTGTGGCTGTTGTCCTTTGTTGGTGATATTCGTTACCGCTTCAACGC
TTCATTCTTTGGTGCTACAGCGATCATCATGCGACCTGCACCCATCCTTC
CCACTTTACTGCCACTTTTCCAGGAAGATGAAGATGGCATTGTCGATAGA
GCTGCAGGGTACTCTCCAAGCGCCGCACCAGACATGGCAGAGGAGGATCC
GTATGACGACCTGGCTGCTGCTGAGGAATTTGAGGAAACAGCAGAGGCGC
CATTCAAGCCGACGGTAGACGCTGCAGCTGGTGAGACAGGGTTCGTGACT
GGGTCTGACCCTGGGACAGCGGTGCCAACTGATGCAGCAGTTGTTGCAGC
GGATTCGCAGGCAGCTAACACAGGTGCAGCCTCAAGCCCAATGGCGCTGG
CGACCAATGAGAGCGCAGCAGCACTGGATGCTGTACACGCTGTAGCTACA
ACAGAGCCAGATGAAGCACGCAACCCTGCAGCAGCGGTGATGACAAATGG
AGGTGATGCGCACATGGACGACGTCAAAGTAGGCGAATCATCACCTGACA
CGACAGCAGCTCCAGTGGCAACAGCAGGCACGGGGGTCATTGATGTGGAG
GTGATGAACGCCACTGGGGAGATGATCAGCACCAACGGTGCGGCAGCTGA
CGTCAGGCCGCCTGTTGAAGAGGACGGGCATGAACTACGCGACGACAGGT
ATGCTTCAGTGTGCACCGCTGAGCCCAAGCTCTCATGCTGTGTATTTCAT
TATGCTGAACCACCTGCTTGCATATACGCCAGCTGTCACGTGGCAACTAC
TTGTGCTCCAGTACAGGCATGCCATTTGTTGCGTGCAATTCACGCTCATG
TGAGCCTGCTACATGTGTTATCTGTTTCCAACACATAATGCTAGTTTCCA
ATTCTGTGGGTTTCTACTTAGGCTCACTGATGGTAGTCATGGTGGCAACT
TAGCTACCTGGCTGGTCAGTTTGCAACTAAAAGAGGTATGAGTCACCAGC
TCTAGGCGCCAATCTTCACGCGCCATATGAAGAGACGGCGCACGGCCCAT
GGGTCAGGCTTACAACCCGATTGCATTGCACACCACAGCGGCCAAATCGA
GGCCAGCGCCCTACTTGAGCACGTCATGAGCAAGTGCCATGTGTTCATGC
ATCGCCGTATACTGCGCGTCGCAATCACGTCATGGTATCGTTTACACGTG
CTGACTTTATTGGCTGCCTGTCGTTTGTTGCATGCAGTCGGCTGTTTTCT
GCGGCGGCGACAGAGTGGTCGCTAGTCTACAGCACGCTGTGCAGCCCACT
TGATGCCACCGGCAGCTCCGCCAATGGCGAGGCTAGTGTGACTGTGTTGC
CGGTGAAGGAATCGATCGGGAAGACACGTCTTGCAACAAGGCTGGACAGC
CGAGTGTGGAGTGGGGACGTACCTGCAGCACTCAATATGGTCCACACAGC
CGAGCTGCTGGCAGAGGTAAGCCCTATTTGAGGACTAGGACATAAGTTGG
CAGCTTGTATGATAATGCAAGGAAATGCTAAGTGCGTACATATAGATGTA
CCACCTGCTTCAAGTTTCATTCAGGACCTTACATGAGCATGTTCAAAGTT
CATACTTTGAAGTAATCTGTCTGCAGGTCTTGCACATTTTTGAGACTTTG
CACACAACAGCTATAGTCAGTATTGACCTATATTTATTGCATTGCTTGTG
AAAAGGAGGAAAGTGTCACGGCTGGTGCGGTTTATGTTTTGTTTCGGTCA
TCACTTGCTCAGTGGATGATACGTCTATACATTATAGAAGCATAAGGTTC
AAGTACATACATACTTCTACTACTGGATTTATATGTTCTTGATTGTCATC
ACAACTGCTTAACTTCCTGTTTGACGTTGCTGCAGGTGGAAGGTGACAAA
TCCCAGTGGTCTGCAGTGTCAGGGATCACATCCATTGTGCTGCAGGCAGT
GGACACCATGCTGGCTCCCAGCGGTGGGCCGACCCTGTGCAGAGTGCCCA
ACATATTCTCCAGCGCAGCGCGAGCAGATGGTGAGCAGCTTCATTCACAC
CAAAATGCTTCAGTTGCGCATCCATTGTTAAACCACGTAAGGGACTAGAA
TAAAGTGGCTCAAATAACTTTTTCGACTTGCACCTTTAGGTTTGGGGTGT
GTGTATTGCTTATAGAAGTATGCGCATATGTCAAAAGTCTCTGTGCAGAT
ATGTTTCAATTCAACTACAGTGACTATGTCAGCAGGTACTCACTCCTCCG
TTGTGGCTTTTGCAACACTAGTTACAAATTCGTACCCTTCTTTTCAAGTA
GGCTCAGAGGCTGCAGCTGCTTTTGTGGGGGTTCTTCGTCCTTGCCCCTC
TTGGGCTTGTCCTGTTTCTGTGGGGGCGTTTTGTTCGGCAACCCAGTGCG
CGGTGGCGCCATGCGTCCCCCGTGGGGATGGTTTTGTTGTCCCAATATCT
GAGTTTTTCAATTGTGCGCACGTGGACTACATCAGACTAGATGCATGCAT
ACACTGACAAGATGCTTGCACATATTTAAACGCATGTCCAGGATAAATGT
GCGTCTTTGTAGTGGTGTACTTGCTTTGCTACCATCAGACCTACAGCGCC
ACACATGCCAAGCTGCCCCTCATCAGCACATACCATGTCACCCGGCTCGT
ACTCACCCTAGGTTGATGATCACGCTTGGAAATTCCTGGAGATGATGTAT
TCCGTTGCTATCACACCCCATTCTTGTGGTTGTCATTCATTCACTTACAG
TACTCCGTACAATGTTATTACCCCCCCCCCCGTCCCCCTTCTCCTCTGTA
CTCACACACACTCCCTAGCAACCAAGGTTGCACATGATGTCATACAATGT
CACACTTCGTCACATCTATGATTTGTTGTCGGCTCTGGTTCAGCTGTGCA
TTGCATTCATTAAGTTGCATTCATTAAGTTGTTTAAGTTGACATGTCACA
ATTTGTCAAGGCATGGTCATGCATGTCACTGCTCATTGCACTGCCATTCT
CAAGTACCCACTGCAGTCTTGTGTTGCTTTTCCCCCTTATCAGGGTATGG
ACCGCATTGGGGCAGTGGTGCTCGCGTCAACCTCGGTGCAGCCGCCGCTC
TCTATGCGCACCTCATCCAGCAGGTACCCAAGCATGCACACTCATTGCGC
GCCATGATGCCCGTGAGGACGTGTAAACTCTCAAAAATTGCACTCACTTT
GCAGAGTCACTGAATAATATATTTGTAACCAACTATATGAGAATGTCTTG
GAACAGCAATCCAAGACAAGCTGGTGTGTGCCTAGCACCATATGGTACCA
GTTAACACCAGTGCTCCAGGCTATATAGTGTTGGCATTTGGCCAAATGAG
TGTTATTGCAGGGTACCCTCAAGATCCATGAGGGACAGGTGGTCATCCGT
CTTTGGAAAATGTGTCAGGGTCCATCCATGTGGGCTTGTATCACTGCTTC
GGACACAGAAGTTTACCGTAAATCACGGGGTATAAGATAGCACCTCTGTA
TAAGAAACGGGTATCTTATACAGCAGAAACGGGTATCTTGAACAGGGTAT
CTTATACAGCGTATAAGATACCCGTTTCTTGTAGCATTCTGACAGGCAGG
TGGGTAAGATACTAGGTTGCTGCATAAGAAACCCCCTTTCTTACACGCGG
TACAAGAAACCTTCGCGTGCAAGAAGCGGGGTTCCTTACGCGACGGTGTG
GGAACCCCATACCTTATGCAGTAAGCAAGGCAACTTTGCAAATTGTAGCA
AAGCACCAACGACAGGCATGAAGCGAGCAGTATTGGCTTGGCACGCCCTC
GCTTGCGCTTAGCAGGCTCTGGGGTTGCTGTAGTAGCGGGTCATTTGATT
CACCATCGCTGGTGGCGCTGCTGCTGCTGCTGCTGCTGCTACACCGGCTA
AACCAGCTGCACTACCACTGGCAGCATACATTCAGCCGTACTGCCTCTCT
ACCTCCTCGCTTCCGCAACCTGAAGACCCCAACACACCGTTTGTGACGCA
CGCGCATACGCCGCATAACATACTTGTTTCTTATGAGGCCGGTGCCCTAA
TTCCGGGGTTTCTCCCGACCAAAGGGGGTCGCTTTGATTTCGGCGCTAAC
CCTAACCCTAGGCAGCAATATGCATGTGTTGGTCTATGGTGTTGACGCGT
GCTGTACTCGACAGCAGGAGACAGCGAGACGTGTGCCAGTCGCCTTAGAT
ACGTTTTTGCTTGCCTGCCGAGCGCTTCACCCCAACGTGGGCGCTAGCGG
CTAAGAAACCAGTTTTGGGTTGGGACCTCTCGGTGTGCACAGCAGCTATT
CTGTTTTTTGACCCGTTCGTGAGGTGGTGAGCTTTTTGGGCTGAATGGAT
ACATAGCATTGTAGCCCTTGGTGCATACATGAGTTCTTCTTAAGAAACCT
ATAGCTAACTCCTCAGCTGTGATGAGTTGATGCCTTTGGCGCAAATCAAT
AGCATTCAGTTCAAAACTCCGCGCGCGCGCTTGCGGAAACCGGCGAATCC
AACCCCAGAATTAGGGCACCGGCCTCTTATAACAGCACTTTGACAGTCAT
GCATGTAATGTAAGATACTAGGTTTGCTTCATAAGATACTCCCTTCCTTA
TACGCCGTATAAGAAACCCGTATCTAAGAGGGCCTAAAAGCCGGTGTTGT
TAAGGAACGGGTATCTTATACCCCGTGATTTACGGTATGTGCTGTCACAA
GCACTTGCTTTTGTATTGAAAATGTCTTGCAGCTGGTATTTTATCACGCC
TCAAGTTGTTGGTTTTCAGGACATGATTTGCGCGCACATGCACATCTACC
AGCAGTGATGGCCCATCACCTCCTGCGTTCAGCATATGTGCATAACACGC
ACTGCATACAAGGCAAACCACAAGACCTGTACATAGCTGGTGCATACATG
AACCGGTATAATAGCCGTTATGTTCACAATAGTGTGGTACCACATGCAAT
GGAGCTGCTAGACGTAGATGTATTAGAACGCTACTGCGAATCTCGTGGTC
CTTGTCATGCGTTACATTTGCAGCTTGCTTGGGCCTCATTTCCTTTGCCT
CTGGCTTGCTGCCCTCCTGTAGGTTCCTCGGGTGGCAATAATCGAGTGCG
GAGCGGATCCTCCCACAGGCACACAAGACATTCTTGCTCGCACACTGATG
CCACAGTACCTGCTGGCTTCTGTGCATTGGGAGAGCGATGCAGCACCTGA
ATGGGGCGAAGGCCGCAGTCCACTAGAGCCGACACTGGTCAGCTGCTCCC
TGCCCAAAATCCCAGATGGGCACAAGGTATGCTGCTGTGCAAAGCAAGAG
GAGAGAACTGTACTTTGACAAAGTGTTTCAACGTTGCTGACACGGCGCCC
TCCCCTTTGCTGGTGCTGGGGTCAGATAAGCGGTACCGCTGCTTTCCCCC
TGAAATTGCATGAACCTCACGCAGCTGATGTTGGCTTCCAGGTATTAGTG
TTGGCTCTGCTGCATGGTATGTGAGCACTGGTACTGCAGAAGGTTTGTCG
AACGCACGCATTTTAACCTTTGCTCAACGCCTCTATCTGCCAGTTGAACT
TGCTTTCCTTTGTCACAAAGGCACTGCCTCGCTGCCATCAGCGCTTGATC
AAATTGACAGCCCTGTTTGCTGAATGTGGCGCCGCAATGCTAGCAGATCA
GCCTCATGAGAGCTGACCGTGCTCTGTCTGACCCTGTTCACCAGATCTTT
TGATGGCAGCCACTTGTCTATGCCACATGGTCAATGCAGGGCTGCGGCCA
CAGAAATGACAATTTTAGGCGGCGCACTCTGCTGCGCCAGATGGAGCCTT
GTACTTGCGCACACTGTGCTTGGTTTCACATGTGGGCGCCAAGCAGCAGC
CAATGCCTGATTAATGTTTCGGGGACCACTGCAACTTGAGTCACGCAGAG
AGAGATATTAGGAAAATCCACTTGCGATATGCTTGTTCGCTAGTTGGATG
TACATGCACCTCATCTTGCAGCTCCGGTATGGAGACTACATGTTTTTTCA
CATGGAAGTAGCTGATTGATCATCACTGTGTTGTTGATTTTTGCTGTATT
CAGCTAGTTAATTTGTATCAGGTGGTCGTTCAGTGGCATGTAAGTAGTGC
AGTGTCAAGCTGCCACCAAATTAGAAAGGTTACCTTATGCTTTACGACAG
CAACAGCTGCTGTCTGTGCAATATACATATACTTCTATGGTAGCTTTGCA
TTCACTCTGCACGGCTCGGTAGTCGATTTGGCCTCCCTTCTGTCATCACG
CTCTCATGTATCGATGATGATGTATGACTGTTGCCGCATGCTCTTTGCAT
CATCTGCACATTCCTCATCATCACCTGCACATTCCTCGCAGGGGCCTTAT
GCTCGCCCGCTTCCCCTCATCCAGTGGTTGTCTCCTGGCATGCAAAAAAA
ATTTAAAGCACTATGAAACGCCAGTGTGAATCGTGTGAAGACAGCGGGCG
TATACACCGCGATGCAGCCGCCATGTACAGTGCATGCCCTCCCTTCGGTG
TGTGTCTACTCCGGCAGGCAGCAGAAGGACACATCAATCACTGGCATGTC
AATACTTACTTGTTTTGTGATTTTCTGCACTCCCACTTGTGCAATCCGCA
GGTTGACACAACTTGCAAGGAGCTCGAGCGGCGGCTTGACTTCTTCCGGC
CCTCGTTTCTGATTGTGACGATGGCATCTGCACCTGGGCCTGTTGAAGAT
CAGGTGTGTGGAATGGAATCACTTATGTTGTGAGCACAGCAATATGCATT
CAGGCACGCTGGATACCTTTGGCCTGCTCAACGTGTGCGTGTCAATCATA
CCGCAGGTTCTGCGCAAGTGCCGAATCACACAGACAGCAGTGTATGGGCG
GTACACATGCACAGTGTCGGGGCGCATTGCTGTAATGTCTCGTATGATGA
TTTAAATCAGATGTAGCCTGGCACTTTGCACCCTTCATGTGTAAAGAGCA
TTGCTTGCTGAGCTAGTCGGATGGTGGCTACACTCCTTGCAATTGTGAGG
TCTGACTGTTGCTGCTGCTCACGTACCTCCTGCCTTGCCTACATGGCGCG
CACTCGCAATATCCTCATCTTGCCCTCAAGTGTTGCTGAGCAAATGTGGT
AGCACTATATAGGATTGCTTCACATTTGTACTTTTCAAACATGCAAGGAT
CCAATGTCAGCTGATTTTTTGTTCGTTGCTCTGCAGGACGTGCTGCGCAA
GCTGATGGCTTCACTGTCAGCTGCTGGCGCCCGGCACTGCAGCCGCAGGA
TGATGGTGCTGCTGCCTGAAAGTGCTGAGCTGGCATCTACAACCATATGT
ACTACGTTGAAACAGCAACAACAGTCAAATTTGTAGCATGAAGGCGACTA
TTGTGGTTGAAGTGAGCGTGGTGCAGCAGCAGAAAAGATGACGGGACCAC
GCCAAGTGGACCACACTGTCGGCATGCGTGCATGATGTTGAACCCAGATG
CAGCTTTGAGCTGGCCTGTGTGCGCAAAGCATGCCACTTCATCACAGGGC
ATGGGAGAGATCACAAGAACGCACTGATGGTGGGCCATGATGCGCTTATG
ACCTTTGGTCACTGTGCGTCAATGCAACAGCAGGAGGGACAGGGTGTCCT
GCGGCTGCTGCAGACTGTACATTTGCAAAGCTGAGGGTGGTGGGTGTCCT
GCGGTTGTTGTGAGAATGTATACTTGCGGGCTATTCTGCTCTAATCACAC
ATCCTGGGAACTACATCAACTCAACGCATGGATGCCTCTTGCTTGCCTAC
ACAGAATATGGTGTGCATGTTATGTTATTGCTGTCTGCAGAAGATGTCAA
TTGAATCATACTTGGATTGAATTGTTATCAGATTCAAATGTGTTGCCCAA
ATCATGACGGTCAGTAGTACTACAGTACCAGGAGATGACAATACCATTGT
ACGCTGCTCCCGACGCCCATGGCATGTGATGGAGGGGGCTAAATTTGATG
GAGCATCTTCTGCGATGTGCAGTAATCCGATTTGATATATGCCAGCATGA
CAACTATGTACAGACATTCGTTGAAGAGAGCAGGTGCATCTTTTGACATC
TGCACAAGTGATGGCACGAGGTGTGATTTGGCACACTGCCAACTTCCCCG
GGGACTTGCAAAAAGTACCCATTCTACGTCCCCTTCAACAAGCTTTGGGG
GGATAGCAGGCAGGGCACAAACAACAGACTCATTGAGCAAATGTCTCTTT
ATCACATTGTTGCTTGCTGGCTGCGGGGGAATGGGGAAAAAACGGCAAGG
AGCTAGGGGTCAAACCACCTAGGTACCCCAGCACCTCCACTGGTGTCGCT
GCTAGTTGCGACGTCCCTTCCCCTGCCTGCGCCGCCGCCTCCTGCCGCCT
GCCTCGCCCGTGTTCAACCCCCGGGCAATTGGCTGGTGGCGGCGGTGGCA
GGGACCAGCAACTTGAAGTTCGAAATGTGTGCTGTGTCGCGCGTCCCGGG
AGGGTTATGTAGAGGTATTCAATGCGGCGGCAGTGTGTATTGCAATCATG
ATAGGTCGGACTGAATGATATGTCAGGCCCTACTAACGCCACACTGCAGT
ATGCCGCGCATGGATGCGTGCGCTTGGTACGGTGTGGTTCCCCTCATGTG
ATTATGGGAGCGTTCAAGCCGACTATTGTCGCGAACGCTACGATGCGATG
CCCGCCGCAAGAGCCTAGGTAAAAACCTCTGGGGTAAACCTGCTAGTCAG
GGGAAACCCCCTAGAGGAAAAGAGCACTCTGGCAGCAGTACGCGTCGTGG
GCTTGAGCCTGGTGGCAAGCTGCCAGCAGTCATGGTGCTAGCACATATGG
GTCGCTGCAACCATGCATTGCTCAAGCAGATCGATACAAGTGGCCTGGGT
CGGCGCGCAGGCCCGTTTGGTAGCCGTTGCAGGCGCACCGGGTATCGGCG
ACGCAATTGCCCGTCGGCGGCCAGTGTGACTGCATCTGCATCACGTCAGA
CAATGGCGACGATTGGTGGGTTGGTGGTCCCTAGACGATAATGATTTTTC
ACCAAAGTGATTCATGCCCCCCCAAACGCAGGTCTGCGTGAATATCCGGC
GGCACCTCAAGTAGTAGTGTGCGAGTGCGTGCATTAAGGCATATGATAAC
GACCTTGTCTGGAGCCCTCCGATCTTTGCGCAGGGTCAATGGCCTGCAGG
AGCTCCAAGGTCAGCCACTGCAGTATGTCTGCAGATCTCGCAGTTCCCTA
GGAAGCCCTGCATGACTGGCTGGCCACTGGGTCAGCATGGCGCGGAGGCA
CTCAATGATGCATATACAATATACTGCGTGATACCATTTTTCATGTTATA
GGTCGACCGCCAGCACAGGACCAGAGTAGTCTTGTGCAGTCTGCGATCTC
AACACATATCACTGGTGCGGAAAACCCGCCCACTTCAAGTTGGGTGCCCA
GCAATTCATTATGGCAATGTGCGTGTGCGGTAGATGGTACGACTGAGTGT
AATGTACCAACACATGCCTTGGCACAATCGTCTACATCAATTGCCACGGG
AGGACCCGTGACGCCGCATGCACCGCCACTATGTCTACCTATTTTGATGA
CCAGTTAATCACTGGCATTGATACGGCGCACCTGTCCTCTTCGCAGCTTA
ATGATGACATAGAACACGCCCTGCTCCTGCGTCCGCATCTACGCCCCCCC
TTTGCTCCATGGCCTGTTGCTCGTGACCCTTGGTTCGGCGAGTTTTGCCA
GCAGCGGCTCTGTTGCTGCTGCTGGGAACCTGCCCAGACGTTACATGCTG
CGAGGCAGCCCTGGTGCCCTCGCGCCACTCTTCTAGGCTCTGCTGATCGT
GCACAGACTGTGGCGCAGTGTCTCCACTCGGACTGATTCCTTCCCTTCGG
AGACCTCTTGGGGCTCGACCACCTGCTGCTGCTGTGCCGCGATGCAGTCT
GCGTGCGTGAGCACCTTTCAACTGTGCCTACCATCTATCGCCTCTACGGC
AGCTGTGCCTAA

Coding sequence (CDS) from alignment at Contig_42:676870..690581+

>mRNA_5701 ID=mRNA_5701|Name=jgi.p|Trimin1|349414|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1278bp|location=Sequence derived from alignment at Contig_42:676870..690581+ (Tribonema minus UTEX_B_3156 )
ATGTCAGTGGCGACAAAGGCAGCAAGTGTCCTGACGCGTCAGCAGAAGCG
GACATCGCCTTCCCCGCCGCTTGATCAAGACCCAGACATGATGGACGACG
ACAGCGCATGGGCGGACGCTGGCATGGCGGACAGCTACAAGTCATCAGTC
GCCGCAAGTGACAATGGCATTGTGTCTGAGATAGACCCCGGGGATGCCGA
AGCTGCAGAGCGGGAGCGGCAGAGAGGGGAGGAGAACATGGCGGCAGAAG
ATGACAATGAAGTGCGGGAAACAACTTCTGATGAAAGCAGTGCAGAGGAG
GGCCAAGAGCTGGTCGTGGAAGTTGTCAGGAGGCGATTTGGCCTGGAGGT
GCCACCAACGCCAATCCCCTACATGCCTGGATTGGTGCATGAGGACTTGA
AGTTGACCAAGGACAGCCTCAGGAGTGGCGGGGACGCCCTGCAGTCTTTT
GTGGCTGCCATGGGATGGACATCTGCTCTACAAGCTGTTAGAGGAGCCAA
GGACGAAGGTGCCTGGAACCCTGTTGAGGGCCAGGCTGAGCAGCAGCAGC
AGCAGGATGTGCCGGCCTCACCTCTGGCCACCGTGCTCAAGACAGCATCA
TCACAGCAGGATGGCACGTGCTCGACGGAGCAGCGCGACATGAACCGCTC
GGAGCAGCTCAGGATTGAGGGCAGGAAGAAGCTTGATGCGCTGATCGAAA
CGTGTGCTGCCACCGTCTCTGGTGTCACGTTATCTGGAGCTGCAATGCGC
AACCTGTACCAGGCAGCTCTCAATGAGGACCGACGCCTAGGACGGCTTAG
GCGGAAGCAACGCGCGGTGGCAGCAGAGATACTCAAAATCAAGGAGAAGA
TGCGCCCTGAGCAGGAAGATGAAGATGGCATTGTCGATAGAGCTGCAGGG
TACTCTCCAAGCGCCGCACCAGACATGGCAGAGGAGGATCCGTATGACGA
CCTGGCTGCTGCTGAGGAATTTGAGGAAACAGCAGAGGCGCCATTCAAGC
CGACGGTAGACGCTGCAGCTGGCACGGGGGTCATTGATGTGGAGGTGATG
AACGCCACTGGGGAGATGATCAGCACCAACGGTGCGGCAGCTGACGTCAG
GCCGCCTGTTGAAGAGGACGGGCATGAACTACGCGACGACAGGGTCAATG
GCCTGCAGGAGCTCCAAGACCTCTTGGGGCTCGACCACCTGCTGCTGCTG
TGCCGCGATGCAGTCTGCGTGCGTGAGCACCTTTCAACTGTGCCTACCAT
CTATCGCCTCTACGGCAGCTGTGCCTAA