Trimin1|349414|estExt_Genemark1.C_Ctg_420096 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349414
Unique NameTrimin1|349414|estExt_Genemark1.C_Ctg_420096
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length426
Homology
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BLAST of jgi.p|Trimin1|349414 vs. uniprot
Match: A0A835Z0T0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T0_9STRA)

HSP 1 Score: 787 bits (2032), Expect = 1.500e-286
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 0 
Query:    1 MSVATKAASVLTRQQKRTSPSPPLDQDPDMMDDDSAWADAGMADSYKSSVAASDNGIVSEIDPGDAEAAERERQRGEENMAAEDDNEVRETTSDESSAEEGQELVVEVVRRRFGLEVPPTPIPYMPGLVHEDLKLTKDSLRSGGDALQSFVAAMGWTSALQAVRGAKDEGAWNPVEGQAEQQQQQDVPASPLATVLKTASSQQDGTCSTEQRDMNRSEQLRIEGRKKLDALIETCAATVSGVTLSGAAMRNLYQAALNEDRRLGRLRRKQRAVAAEILKIKEKMRPEQEDEDGIVDRAAGYSPSAAPDMAEEDPYDDLAAAEEFEETAEAPFKPTVDAAAGTGVIDVEVMNATGEMISTNGAAADVRPPVEEDGHELRDDRVNGLQELQDLLGLDHLLLLCRDAVCVREHLSTVPTIYRLYGSCA 425
            MSVATKAASVLTRQQKRTSPSPPLDQDPDMMDDDSAWADAGMADSYKSSVAASDNGIVSEIDPGDAEAAERERQRGEENMAAEDDNEVRETTSDESSAEEGQELVVEVVRRRFGLEVPPTPIPYMPGLVHEDLKLTKDSLRSGGDALQSFVAAMGWTSALQAVRGAKDEGAWNPVEGQAEQQQQQDVPASPLATVLKTASSQQDGTCSTEQRDMNRSEQLRIEGRKKLDALIETCAATVSGVTLSGAAMRNLYQAALNEDRRLGRLRRKQRAVAAEILKIKEKMRPEQEDEDGIVDRAAGYSPSAAPDMAEEDPYDDLAAAEEFEETAEAPFKPTVDAAAGTGVIDVEVMNATGEMISTNGAAADVRPPVEEDGHELRDDRVNGLQELQDLLGLDHLLLLCRDAVCVREHLSTVPTIYRLYGSCA
Sbjct:    1 MSVATKAASVLTRQQKRTSPSPPLDQDPDMMDDDSAWADAGMADSYKSSVAASDNGIVSEIDPGDAEAAERERQRGEENMAAEDDNEVRETTSDESSAEEGQELVVEVVRRRFGLEVPPTPIPYMPGLVHEDLKLTKDSLRSGGDALQSFVAAMGWTSALQAVRGAKDEGAWNPVEGQAEQQQQQDVPASPLATVLKTASSQQDGTCSTEQRDMNRSEQLRIEGRKKLDALIETCAATVSGVTLSGAAMRNLYQAALNEDRRLGRLRRKQRAVAAEILKIKEKMRPEQEDEDGIVDRAAGYSPSAAPDMAEEDPYDDLAAAEEFEETAEAPFKPTVDAAAGTGVIDVEVMNATGEMISTNGAAADVRPPVEEDGHELRDDRVNGLQELQDLLGLDHLLLLCRDAVCVREHLSTVPTIYRLYGSCA 425
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349414 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z0T0_9STRA1.500e-286100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:676870..690581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349414mRNA_5701Tribonema minus UTEX_B_3156 mRNAContig_42 676870..690581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349414|estExt_Genemark1.C_Ctg_420096 ID=Trimin1|349414|estExt_Genemark1.C_Ctg_420096|Name=jgi.p|Trimin1|349414|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=426bp
MSVATKAASVLTRQQKRTSPSPPLDQDPDMMDDDSAWADAGMADSYKSSV
AASDNGIVSEIDPGDAEAAERERQRGEENMAAEDDNEVRETTSDESSAEE
GQELVVEVVRRRFGLEVPPTPIPYMPGLVHEDLKLTKDSLRSGGDALQSF
VAAMGWTSALQAVRGAKDEGAWNPVEGQAEQQQQQDVPASPLATVLKTAS
SQQDGTCSTEQRDMNRSEQLRIEGRKKLDALIETCAATVSGVTLSGAAMR
NLYQAALNEDRRLGRLRRKQRAVAAEILKIKEKMRPEQEDEDGIVDRAAG
YSPSAAPDMAEEDPYDDLAAAEEFEETAEAPFKPTVDAAAGTGVIDVEVM
NATGEMISTNGAAADVRPPVEEDGHELRDDRVNGLQELQDLLGLDHLLLL
CRDAVCVREHLSTVPTIYRLYGSCA*
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