mRNA_19017 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA) HSP 1 Score: 1677 bits (4343), Expect = 0.000e+0 Identity = 875/986 (88.74%), Postives = 896/986 (90.87%), Query Frame = 3
Query: 111 SFPIKLITSSQPH-----FFCCPHSKAGMDIDDFDLRAAENGFIDDEEPPEXXXXXXXXXXXXXXXXXXXXXXXPSPKRNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPY--NADHPLALTAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKITCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAKSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPKCAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRSHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVDPQLQDLEPHLEAARAAXXXXXXXXXXXXXXXXDLTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGGY 3017
S+PI + H FF P ++ MDIDDFDLRAAENGFI DEEPPE XXXXX PSPKRNTSYARQK+QQY PSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLP+DAETRLR DIDVEVPY NADHPLALT AVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHG+KITCSDIKCTHKDMLG+RQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGY TVAVM GGDLHDLSFAELLRA SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIR GTISWREVSPGTDARVCLVP+CAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLR HDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYV+P+LQ+LEP+LEAA A XXXXXXXXXXXXXXXX+L L+AKAASLFAIKESIKGTSKREAILKDVFST+RDEDFEKLLDVNKDIFSC+NGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR G +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNN RARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQ N KCVYAGLKSAGGY
Sbjct: 24 SYPIGKFSHQTDHVISTTFFLLPSFESSMDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAPR---PSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVM---------GGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA) HSP 1 Score: 692 bits (1785), Expect = 6.570e-241 Identity = 350/366 (95.63%), Postives = 355/366 (96.99%), Query Frame = 3
Query: 1872 KDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 2939
KDVFSTVRDEDFEKLLDVNKDIFSC+NGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK
Sbjct: 1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA) HSP 1 Score: 191 bits (485), Expect = 9.880e-50 Identity = 138/385 (35.84%), Postives = 194/385 (50.39%), Query Frame = 3
Query: 1890 VRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAK-FRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAG 3011
VRD+ F LLD +KD+ S +GVV+L TATLRPRVR D L A++ ++ + P + + + + D+TL+ RL RP LE + R++GYSITGH REEIIV +G A N KG++ LL VL ++Y AP+S + AGAASS M AL G R+ +DE+P D Q + ++GGA I REL+ Q SF N N ++ A L+RI P D + + D + H + + K++ +L AK+WYE GLG P CC DN + WI + CE+G EG L +S +N++ A + P I +M +GF R +Q K GLK AG
Sbjct: 11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGFHIAQATR---TQLRDKRCCHGLKIAG 379
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B) HSP 1 Score: 111 bits (278), Expect = 2.420e-21 Identity = 98/302 (32.45%), Postives = 142/302 (47.02%), Query Frame = 3
Query: 1917 LDVNKDIFSCENGVVELATATLRPRVRKDML-TRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPA 2816
LD N + NGVV+L T L P R DML TR DY+ + P +Q L ++ A + + R LGY++TG EEIIVF +G A NGK I +++ +++G AP S L + G M L GAR+V ++ELPAG+ +D Q +K ++G IS REL+ +F P W TN PIIK + I +RI ++P KF K K +N LR + A+++ G + +D+D L ++ D C + ADPA
Sbjct: 450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKH---LEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLAD-CTI-----ADPA 732
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM) HSP 1 Score: 110 bits (274), Expect = 4.590e-21 Identity = 114/440 (25.91%), Postives = 178/440 (40.45%), Query Frame = 3
Query: 1563 IGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVA--------------AYVDPQLQDLEPHLEAARAAXXXXXXXXXXXXXXXXDLTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDY--NADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCS 2831
+G G RF +K LW Y +I +L A A + LQ + L A A LE ++ L + ++GT+KR +L V + LD + + NG V+L T LRP R D+LT V I Y NA +P T L++ + R +GYS+TG VRE++++ G + NGK + ++L+++LG + QA L A K + + G R++ E G + ++K ++GG I R + F+PT W +TN P IK + AI +RI +IP + KF G+ + D + L + W GLG+ A + A + + D L +WI + C +G R A A + S
Sbjct: 89 LGLHGADIRFCPPWDKWLLWSGSYWQIDNRLDIERLAADVPKVIRKRAIDLTAELQSLLQKMAELLAAINADPSRARLLTQERARLLERKLKLEDESEWLIKLASKLEGTAKRSCMLLATRHKVVIHHSD--LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPRKNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM) HSP 1 Score: 108 bits (269), Expect = 3.130e-20 Identity = 84/315 (26.67%), Postives = 144/315 (45.71%), Query Frame = 3
Query: 1917 LDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGE-------KPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSA 2837
LD + + + +NG ++L+ TLR R D+LT I Y D+ P + L+++ + L+ + R +GYS+TG VRE++++ G + NGK + ++++++LG + QA L A + + + G R+V E G + ++K ++GG I+ R +F +F PT W +TN P I+ + AI +RI +IP + KF PG+ + D KL + +P W G + P K A + + D L +W+ D C + A A + S A
Sbjct: 444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMPGIMAWAVRGCLDWQREGLRAPEAVKAATANYQQEQDVLAAWLADCCIVKRTADAKAADLYGSYA 741
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A257JK46_9PROT (SF3 helicase domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium PA3 TaxID=2015571 RepID=A0A257JK46_9PROT) HSP 1 Score: 106 bits (265), Expect = 3.710e-20 Identity = 103/374 (27.54%), Postives = 168/374 (44.92%), Query Frame = 3
Query: 1917 LDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREH-------LPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGG 3014
LD + NGVV+L L P +TR D++ S + P ++ L + ++ LL LGY++TG+ EEI++F +G A NGK I +++ +LG AP L + + G + M L GAR+V ++ELPAG+ LD Q++K ++G IS R L ++ P PW TN PI+K + I +RI I+P F +++ ++ LRE + A+R+ GL PA K + D+D L ++ EC A A + + F + N+ ++ + P K+ +++ +GF D N K Y GL+++GG
Sbjct: 195 LDAKPLLLGVGNGVVDLRRKRLLPNEPGYFITRYCYADFDP-SAQCPSWLRSLDAMFQGDTATIDAVQLL------LGYTLTGYSTEEIMIFCVGFGA-NGKSIFGNVVAAILGDYSRTAPSQLLASRRTDDHGPRNDMAM-LDGARLVSINELPAGMHLDEQVVKQLAGREPISARFLHKEYFTYEPRFTPWVRTNHKPIVKGDDEGIWRRIVILPFRRTFAP----------HEQDPHLEGKLLRERDGILAWMVEGAQRYLREGLKLSPAM-KRELAQYRTDSDMLGEFLA-ECTAT----ATGARVEQKTLFLSWQNWC--KDNGVQPGSKKTFTQRLKERGFPPKDS--------NGKRYYQGLRTSGG 533
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: UPI001FB9F2E6 (phage/plasmid primase, P4 family n=1 Tax=Ligilactobacillus sp. AF129 TaxID=2886039 RepID=UPI001FB9F2E6) HSP 1 Score: 107 bits (268), Expect = 3.790e-20 Identity = 78/291 (26.80%), Postives = 147/291 (50.52%), Query Frame = 3
Query: 1920 DVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGR---SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWIND 2777
D +I + +G+V+L++ +++P +D++T++ N + + P + + DI + P L+E + +++GY+ITG V E++ VFLLG+ + NGK ++ +L+Q+LG +T K ++ + + + +A +GAR++ E+ G L M+K ++GG I+ + L+ SF+PT W ++N PII + I +R+ IP AK K P+ DK K + + A ++ G+ + P D + D D + ++IND
Sbjct: 435 DRKTNIINTPSGIVDLSSGSIKPATTEDLVTKSTNAEIS--EIETPIFDKFMLDIFPS------HPELIELVQKLIGYTITGTVAEQLTVFLLGKGNENGANGKSVLVEVLRQILGDYAVSIQPETITYSKTTNSSSNTDNQIADTKGARMIATSEIERGAKLSESMLKRLTGGEMITAKRLYEKPISFTPTGTLWMSSNYKPIISGTDNGIWRRLVFIPMTAKITK----KDPH-LKDKLMTEKAGIMNWIIEGALKYQRDGI-QLPKIITNEVDEYREDMDDVATFIND 711
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: UPI0003455EE6 (phage/plasmid primase, P4 family n=2 Tax=unclassified Pandoraea TaxID=2624094 RepID=UPI0003455EE6) HSP 1 Score: 107 bits (267), Expect = 5.040e-20 Identity = 90/319 (28.21%), Postives = 146/319 (45.77%), Query Frame = 3
Query: 1920 DVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLR-ILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFY-QAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAE-PAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 2867
D + + NGVV+L T R +DM+T + ++ + R P+ L + AP+R+ L R LR +LGYS+TG ++E+ F+LGR + NGKG + ++ V+G + Q SFL +A + +MAL+ R++ E +D K ++GG +SGR +G SF P +TNEMP E A+ +R+ +IP KF A D +DK + L + A + + G + A + A D+++ WI+ EC+ + I AF Y+ + R
Sbjct: 449 DTDPYLLGVPNGVVDLRTKEFRAGRPQDMITCTTDAKFDPTA-RCPQFAAFLQSV---APDRV-----LRRFLRSVLGYSMTGLIKEQKAFFMLGRGS-NGKGTLTRAIENVVGPFYSGQMSPSFLKGANKGNANGPTPALMALQRPRILFCTESERRGGIDEPFFKQLTGGDQVSGRHNYGETESFRPRGKLLLSTNEMPDWDRENDALWRRVMVIPFTQKF---SGASRDNDLDDKLATEASGILNWLIAGASDYLQAGRLPRCAQVEAATSDARTRADSVRMWIDAECKRSAN-----GKIAAQDAFDAYSRFTGR 749
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A174BTY0_9FIRM (Uncharacterized conserved protein n=2 Tax=Eubacteriales TaxID=186802 RepID=A0A174BTY0_9FIRM) HSP 1 Score: 103 bits (258), Expect = 1.550e-19 Identity = 87/299 (29.10%), Postives = 136/299 (45.48%), Query Frame = 3
Query: 1914 LLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQ-RIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWY---------EGGLGEKPACCKLACDAFAADNDTLQSWIND 2777
+ D +F+C+N V L T P D LT+ N+ Y+ + E + ++DI + L+E L R LGYS++ +E G S RNGKG + S +Q ++G A + K S G +S +A L GAR V + E G+ LD+ +IK +SG I+ R L+ F + W NTN +P I + R+++IP + F G+ D DK + TK RE++ A W EGGL + P + +A+ A +D + ++ D
Sbjct: 115 IFDKQPYLFNCQNCTVNLTTGAANPHDPYDYLTKISNVWYDPEESG-EEFQKFISDIMQ------DNSELIEYLKRALGYSLSAATFQECFFITYGESTRNGKGTLNSTMQNMMGDYAKSASYETFESKKYKSGGGGTSEDIARLAGARYVSVSEPQEGMTLDSALIKMLSGNDTITARNLYEKSFEFVASFKIWINTNHLPNISDDTVFKSGRVQLIPFNRHF---GE-----DEQDKGLKARLTK-RENISGAFNWCMEGFQLMATEGGL-KVPEVIRQEIEAYRAKSDRIGMFLED 396
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A835Z4B6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B6_9STRA) HSP 1 Score: 558 bits (1437), Expect = 1.700e-196 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1
Query: 1 MALASLRKPASPFEYPELRRGIKRRNAAETELRLYMEGMRSTVQDLVQQLQTSKNVRVATDAHMRALHAESTATYRPRXXXXXXXXXXXXXSAIDRAAFNARAARGIDXXXXXXXXXXXXXXXXAATQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQPATPATDTAA 1017
MALASLRKPASPFEYPELRRGIKRRNAAETELRLYMEGMRSTVQDLVQQLQTSKNVRVATDAHMRALHAESTATYRPRXXXXXXXXXXXXXSAIDRAAFNARAARGIDXXXXXXXXXXXXXXXXAATQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQPATPATDTAA
Sbjct: 1 MALASLRKPASPFEYPELRRGIKRRNAAETELRLYMEGMRSTVQDLVQQLQTSKNVRVATDAHMRALHAESTATYRPRXXXXXXXXXXXXXSAIDRAAFNARAARGIDXXXXXXXXXXXXXXXXAATQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQPATPATDTAA 339
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: D7FQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ19_ECTSI) HSP 1 Score: 150 bits (379), Expect = 3.260e-38 Identity = 90/212 (42.45%), Postives = 118/212 (55.66%), Query Frame = 1
Query: 376 ATQRIAYGVTDD-GARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFD-------NGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQ 987
AT RI +GV+D AR RYE + G R+T A+ +A SPL+E A A V++FD +G+ A +P +G+V PGDE AL H D+TL LLVYPPPGDMALRC+ Y GD +VYVGEGRGG NA + FF L+ W VE ++ L+PFP+CFER+F+LRR+ + A S+Q
Sbjct: 158 ATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLMSALSPLVEIGAGRG---------------HWQRGLSEAGATVISFDKWATTPSSGNERGTTAGMPQIGRVLPGDEHALRLHRDKTL--------LLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDEFFDGLDAEWDVENILDLDPFPQCFERLFLLRRRQRTAVGASSQQ 346
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: F2U2F6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U2F6_SALR5) HSP 1 Score: 138 bits (347), Expect = 5.990e-35 Identity = 82/200 (41.00%), Postives = 111/200 (55.50%), Query Frame = 1
Query: 379 TQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPP 978
+Q I YG + AR +Y +GCARWTE AL A++SPLIE A DV+AFDN S+ QP A PV +V PGD + + +P RTL LLVYPP DMAL+C + + G+ ++YVGE RGGVNA++AFF ++E + + L+PFP C ER+++LRRKP+ P
Sbjct: 38 SQIIIYGTAERHARQKYLAKYGCARWTEDALNTIASFSPLIEIGAGQGHWAKA---------------LRKLGVDVMAFDNDSTEQPGTA--PVSQVRPGDHTKIGWYPRRTL--------LLVYPPETDMALQCAQEFRGNYLIYVGEARGGVNANDAFFNHVDEQFDCVHIQDLDPFPRCHERLYVLRRKPEHRTAQP 212
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A061SI58_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SI58_9CHLO) HSP 1 Score: 140 bits (353), Expect = 1.040e-34 Identity = 86/195 (44.10%), Postives = 111/195 (56.92%), Query Frame = 1
Query: 379 TQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQ 963
TQ I YGV + GARARY +GCA W+E A+ A A +SPLIE + AD++AFDNG++ P LP VG+V GD L +H RTL LL YP G+MA +C+ Y G+ ++YVGEGRGGVNA + FF LE W E+VI L+PFP FER+F+LRR+ +Q
Sbjct: 140 TQIILYGVRERGARARYMAKYGCAAWSEEAIRAVAGFSPLIEIGAGKG---------------QWQAELSRRGADIIAFDNGAA-VPCPELPAVGEVRHGDHRELRRHRGRTL--------LLCYPE-GEMAEQCLELYGGEWLLYVGEGRGGVNATDEFFRRLEAEWVCEQVIQLQPFPGNFERLFVLRRRNRQ 309
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A250XG93_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XG93_9CHLO) HSP 1 Score: 134 bits (336), Expect = 1.070e-31 Identity = 78/192 (40.62%), Postives = 107/192 (55.73%), Query Frame = 1
Query: 379 TQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRK 954
+Q+I +GV + AR Y +GC RWTE AL ++SPLIE A + ADVLAFD+GS+ P+ + VG+V G+E + +HP RTL LLVYP P DM L C+ Y G ++YVGE RGG+N + FF LE W ERV+ L+PFP+ +E+++IL+RK
Sbjct: 207 SQKIIFGVDEPNARKSYLERYGCTRWTEEALQVIKSFSPLIEIGGGHGHWQKALTSI---------------GADVLAFDDGSA-LPVLGMDNVGEVQKGNEKEIRRHPRRTL--------LLVYPGPTDMGLNCLNEYRGRYLLYVGEPRGGINGNEQFFNELEREWTCERVVPLDPFPDGYEQLYILKRK 374
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A7S2GQ02_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ02_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.890e-28 Identity = 81/193 (41.97%), Postives = 101/193 (52.33%), Query Frame = 1
Query: 382 QRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGK--VAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRK 954
+ Y G+R Y ++GCA WTE AL A I A P I+ + A G + A ADVLAFDN + K V GDE L + P LLLVYPP G MA CVR YSGDVI++VGEGR GVNAD+AFF LE+GW++E + L PFP FE+++I+ RK
Sbjct: 6 ENAMYPGAPRGSRRTYLEEYGCAAWTEPALLA-------IIAKAGPRIVEIGA------GGGQWKTALEAAGADVLAFDNRIEKDTPQYVTSKTKEIVLQGDERKLQE------PGMEKRALLLVYPPQGPMAANCVRLYSGDVIIFVGEGRSGVNADSAFFDLLEDGWKLECKLPLAPFPGGFEKLYIVYRK 179
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A2R5GST6_9STRA (MFS_1_like domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GST6_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.810e-26 Identity = 77/196 (39.29%), Postives = 108/196 (55.10%), Query Frame = 1
Query: 382 QRIAYGVTDDGARAR--YERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQ-PLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQ 960
QR+ +GV+ + A AR Y + +GC +W+E A+ AA P++E A + R D++A+D+ S P V G+E+ L KH DRTL LLV PPP +MA +C+ AY GD +VYVGEGRGG +AD+ FF LE W+VE +I + PF EC+E+ FIL+RKP+
Sbjct: 531 QRLIFGVSPEQAHARDEYLQAYGCVKWSEQAMQKIAALGPIVELG-------------AGYGQWRQELAQQH-KVDIIAYDDYSQLYLPSEKAREETGVLEGNETVLRKHRDRTL--------LLVCPPPNEMASKCMSAYRGDRLVYVGEGRGGAHADSDFFNTLESKWEVEEIIDVLPFSECYEKCFILKRKPR 704
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A7S1RWX2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWX2_ALECA) HSP 1 Score: 116 bits (290), Expect = 5.530e-26 Identity = 74/192 (38.54%), Postives = 99/192 (51.56%), Query Frame = 1
Query: 376 ATQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRR 951
A R+ Y R ++G +WTEAAL AA A SPL+E A A ADVLA+D+ SSP L +G+V+ G E + +H DR + LLVYP PG MA C+ Y+GD +VYVGEGRGGVN D+AFF A+ W++ R ++ P +E M+IL+R
Sbjct: 128 AAHRLLYPTLSPEELRRRREEYGAVKWTEAALHAAVAVSPLVEVGAGRGQWQRALAGL---------------GADVLAYDDMSSPSTRLGL--IGQVSQGSEDVVRRHADRAM--------LLVYPNPGPMAYNCLGNYAGDTLVYVGEGRGGVNGDDAFFDAVSADWKLIRSEPVDRLPGGYEHMYILQR 294
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A812SF89_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812SF89_SYMPI) HSP 1 Score: 109 bits (273), Expect = 1.600e-25 Identity = 60/123 (48.78%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 604 VLAFDNGSSPQPLAALPPVGKVAPGD-------ESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRR 951
V AFD+ SSP P V G E AL + P RTL LLVYPPPG MA+RC+ +Y+GDV++YVGEGRGGVN DNAFF AL GW++E I L+ P +E++++LRR
Sbjct: 1 VTAFDDHSSPSRFGQNPASRLVVRGADVQQADAEEALRRSPGRTL--------LLVYPPPGPMAIRCLTSYTGDVLLYVGEGRGGVNGDNAFFDALSMGWKLEETIELDALPGSYEKLYLLRR 115
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A812QMF7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QMF7_9DINO) HSP 1 Score: 110 bits (274), Expect = 5.710e-25 Identity = 63/173 (36.42%), Postives = 88/173 (50.87%), Query Frame = 1
Query: 433 RDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRR 951
R +G +WTEAA+ A +SPL+E + ADV AFD+ SSP ++A G + + LLLVYPPPG MA+RC+ Y+GD ++YVGEGRGGVNAD FF AL GW++E + L+ P +E+++ L+R
Sbjct: 15 RTYGNVKWTEAAMQLVARHSPLVEVGAGEG---------------QWQSELRRRGADVTAFDDHSSPSRFGEGAKTSRLAVGGADVQQADAEEAMRRSQGRTLLLVYPPPGPMAMRCLARYAGDALLYVGEGRGGVNADGPFFDALSVGWKLEETVELDNLPGSYEKLYHLQR 172 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|354698 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_19017 ID=mRNA_19017|Name=jgi.p|Trimin1|354698|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3020bp|location=Sequence derived from alignment at Contig_416:5919..8967+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TCCTATTTCTCCTATTTTCCTATCATGCATACCCAGATTTAGTGCTTCAGback to top protein sequence of jgi.p|Trimin1|354698 >Trimin1|354698|estExt_Genemark1.C_Ctg_4160001 ID=Trimin1|354698|estExt_Genemark1.C_Ctg_4160001|Name=jgi.p|Trimin1|354698|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=947bp MDIDDFDLRAAENGFIDDEEPPEEPPMPLATPPAAAPAAPCAPPARPSPKback to top mRNA from alignment at Contig_416:5919..8967+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_19017 ID=mRNA_19017|Name=jgi.p|Trimin1|354698|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3049bp|location=Sequence derived from alignment at Contig_416:5919..8967+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_416:5919..8967+ >mRNA_19017 ID=mRNA_19017|Name=jgi.p|Trimin1|354698|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2841bp|location=Sequence derived from alignment at Contig_416:5919..8967+ (Tribonema minus UTEX_B_3156 )back to top |