Trimin1|354698|estExt_Genemark1.C_Ctg_4160001 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354698
Unique NameTrimin1|354698|estExt_Genemark1.C_Ctg_4160001
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length947
Homology
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA)

HSP 1 Score: 1667 bits (4318), Expect = 0.000e+0
Identity = 868/958 (90.61%), Postives = 885/958 (92.38%), Query Frame = 0
Query:    1 MDIDDFDLRAAENGFIDDEEPPEXXXXXXXXXXXXXXXXXXXXXXXPSPKRNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPY--NADHPLALTAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKITCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAKSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPKCAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRSHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVDPQLQDLEPHLEAARAAXXXXXXXXXXXXXXXXDLTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGGY 946
            MDIDDFDLRAAENGFI DEEPPE           XXXXX       PSPKRNTSYARQK+QQY  PSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLP+DAETRLR DIDVEVPY  NADHPLALT AVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHG+KITCSDIKCTHKDMLG+RQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGY TVAVM         GGDLHDLSFAELLRA SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIR GTISWREVSPGTDARVCLVP+CAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLR HDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYV+P+LQ+LEP+LEAA A XXXXXXXXXXXXXXXX+L  L+AKAASLFAIKESIKGTSKREAILKDVFST+RDEDFEKLLDVNKDIFSC+NGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR            G  +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP          AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNN RARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQ N KCVYAGLKSAGGY
Sbjct:   52 MDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAPR---PSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVM---------GGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA)

HSP 1 Score: 692 bits (1785), Expect = 9.820e-242
Identity = 350/366 (95.63%), Postives = 355/366 (96.99%), Query Frame = 0
Query:  565 KDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 920
            KDVFSTVRDEDFEKLLDVNKDIFSC+NGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP          AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK
Sbjct:    1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA)

HSP 1 Score: 191 bits (485), Expect = 7.780e-50
Identity = 138/385 (35.84%), Postives = 194/385 (50.39%), Query Frame = 0
Query:  571 VRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAK-FRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAG 944
            VRD+ F  LLD +KD+ S  +GVV+L TATLRPRVR D L  A++  ++ + P +  + + + D+TL+   RL RP  LE + R++GYSITGH REEIIV  +G  A N KG++  LL  VL  ++Y AP+S +       AGAASS M AL G R+  +DE+P     D Q  + ++GGA I  REL+  Q SF        N N    ++   A L+RI   P D +       +    D  +  H + + K++ +L            AK+WYE GLG  P CC         DN  +  WI + CE+G  EG      L +S    +N++ A + P    I       +M  +GF      R   +Q   K    GLK AG
Sbjct:   11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGFHIAQATR---TQLRDKRCCHGLKIAG 379          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B)

HSP 1 Score: 111 bits (278), Expect = 2.160e-21
Identity = 98/302 (32.45%), Postives = 142/302 (47.02%), Query Frame = 0
Query:  580 LDVNKDIFSCENGVVELATATLRPRVRKDML-TRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPA 879
            LD N  +    NGVV+L T  L P  R DML TR    DY+  +   P  +Q L ++           A +  + R LGY++TG   EEIIVF +G  A NGK I  +++ +++G     AP S L   +    G      M L GAR+V ++ELPAG+ +D Q +K ++G   IS REL+    +F P    W  TN  PIIK +   I +RI ++P   KF      K       K    +N  LR  +  A+++   G              + +D+D L  ++ D C +     ADPA
Sbjct:  450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKH---LEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLAD-CTI-----ADPA 732          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM)

HSP 1 Score: 110 bits (274), Expect = 4.120e-21
Identity = 114/440 (25.91%), Postives = 178/440 (40.45%), Query Frame = 0
Query:  462 IGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVA--------------AYVDPQLQDLEPHLEAARAAXXXXXXXXXXXXXXXXDLTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDY--NADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCS 884
            +G  G   RF    +K  LW   Y       +I +L A              A +   LQ +   L A  A                     LE ++  L  +   ++GT+KR  +L      V     +  LD    + +  NG V+L T  LRP  R D+LT  V I Y  NA +P            T           L++ + R +GYS+TG VRE++++   G  + NGK +  ++L+++LG +  QA    L A K        + +    G R++   E   G   +  ++K ++GG  I  R +      F+PT   W +TN  P IK  + AI +RI +IP + KF   G+ +   D   +        L   +     W   GLG+  A  + A   +  + D L +WI + C +G R  A  A +  S
Sbjct:   89 LGLHGADIRFCPPWDKWLLWSGSYWQIDNRLDIERLAADVPKVIRKRAIDLTAELQSLLQKMAELLAAINADPSRARLLTQERARLLERKLKLEDESEWLIKLASKLEGTAKRSCMLLATRHKVVIHHSD--LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPRKNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM)

HSP 1 Score: 108 bits (269), Expect = 2.800e-20
Identity = 84/315 (26.67%), Postives = 144/315 (45.71%), Query Frame = 0
Query:  580 LDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGE-------KPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSA 886
            LD  + + + +NG ++L+  TLR   R D+LT    I Y  D+   P   + L+++     +      L+  + R +GYS+TG VRE++++   G  + NGK +  ++++++LG +  QA    L A +        + +    G R+V   E   G   +  ++K ++GG  I+ R +F    +F PT   W +TN  P I+  + AI +RI +IP + KF  PG+ +   D           KL + +P    W   G  +        P   K A   +  + D L +W+ D C +     A  A +  S A
Sbjct:  444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMPGIMAWAVRGCLDWQREGLRAPEAVKAATANYQQEQDVLAAWLADCCIVKRTADAKAADLYGSYA 741          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A257JK46_9PROT (SF3 helicase domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium PA3 TaxID=2015571 RepID=A0A257JK46_9PROT)

HSP 1 Score: 106 bits (265), Expect = 3.360e-20
Identity = 103/374 (27.54%), Postives = 168/374 (44.92%), Query Frame = 0
Query:  580 LDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREH-------LPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGG 945
            LD    +    NGVV+L    L P      +TR    D++  S + P  ++ L  +       ++   LL      LGY++TG+  EEI++F +G  A NGK I  +++  +LG     AP   L + +    G  +   M L GAR+V ++ELPAG+ LD Q++K ++G   IS R L     ++ P   PW  TN  PI+K +   I +RI I+P    F            +++   ++   LRE        +  A+R+   GL   PA  K     +  D+D L  ++  EC       A  A +   + F  + N+   ++  + P  K+   +++  +GF   D         N K  Y GL+++GG
Sbjct:  195 LDAKPLLLGVGNGVVDLRRKRLLPNEPGYFITRYCYADFDP-SAQCPSWLRSLDAMFQGDTATIDAVQLL------LGYTLTGYSTEEIMIFCVGFGA-NGKSIFGNVVAAILGDYSRTAPSQLLASRRTDDHGPRNDMAM-LDGARLVSINELPAGMHLDEQVVKQLAGREPISARFLHKEYFTYEPRFTPWVRTNHKPIVKGDDEGIWRRIVILPFRRTFAP----------HEQDPHLEGKLLRERDGILAWMVEGAQRYLREGLKLSPAM-KRELAQYRTDSDMLGEFLA-ECTAT----ATGARVEQKTLFLSWQNWC--KDNGVQPGSKKTFTQRLKERGFPPKDS--------NGKRYYQGLRTSGG 533          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: UPI001FB9F2E6 (phage/plasmid primase, P4 family n=1 Tax=Ligilactobacillus sp. AF129 TaxID=2886039 RepID=UPI001FB9F2E6)

HSP 1 Score: 107 bits (268), Expect = 3.390e-20
Identity = 78/291 (26.80%), Postives = 147/291 (50.52%), Query Frame = 0
Query:  581 DVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGR---SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWIND 866
            D   +I +  +G+V+L++ +++P   +D++T++ N + +      P   + + DI  +       P L+E + +++GY+ITG V E++ VFLLG+   +  NGK ++  +L+Q+LG          +T  K  ++ + + + +A  +GAR++   E+  G  L   M+K ++GG  I+ + L+    SF+PT   W ++N  PII   +  I +R+  IP  AK       K P+   DK    K   +   +  A ++   G+ + P       D +  D D + ++IND
Sbjct:  435 DRKTNIINTPSGIVDLSSGSIKPATTEDLVTKSTNAEIS--EIETPIFDKFMLDIFPS------HPELIELVQKLIGYTITGTVAEQLTVFLLGKGNENGANGKSVLVEVLRQILGDYAVSIQPETITYSKTTNSSSNTDNQIADTKGARMIATSEIERGAKLSESMLKRLTGGEMITAKRLYEKPISFTPTGTLWMSSNYKPIISGTDNGIWRRLVFIPMTAKITK----KDPH-LKDKLMTEKAGIMNWIIEGALKYQRDGI-QLPKIITNEVDEYREDMDDVATFIND 711          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: UPI0003455EE6 (phage/plasmid primase, P4 family n=2 Tax=unclassified Pandoraea TaxID=2624094 RepID=UPI0003455EE6)

HSP 1 Score: 107 bits (267), Expect = 4.500e-20
Identity = 90/319 (28.21%), Postives = 146/319 (45.77%), Query Frame = 0
Query:  581 DVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLR-ILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFY-QAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAE-PAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 896
            D +  +    NGVV+L T   R    +DM+T   +  ++  + R P+    L  +   AP+R+     L R LR +LGYS+TG ++E+   F+LGR + NGKG +   ++ V+G  +  Q   SFL      +A   +  +MAL+  R++   E      +D    K ++GG  +SGR  +G   SF P      +TNEMP    E  A+ +R+ +IP   KF     A    D +DK     +  L   +  A  + + G   + A  + A        D+++ WI+ EC+  +        I    AF  Y+ +  R
Sbjct:  449 DTDPYLLGVPNGVVDLRTKEFRAGRPQDMITCTTDAKFDPTA-RCPQFAAFLQSV---APDRV-----LRRFLRSVLGYSMTGLIKEQKAFFMLGRGS-NGKGTLTRAIENVVGPFYSGQMSPSFLKGANKGNANGPTPALMALQRPRILFCTESERRGGIDEPFFKQLTGGDQVSGRHNYGETESFRPRGKLLLSTNEMPDWDRENDALWRRVMVIPFTQKF---SGASRDNDLDDKLATEASGILNWLIAGASDYLQAGRLPRCAQVEAATSDARTRADSVRMWIDAECKRSAN-----GKIAAQDAFDAYSRFTGR 749          
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Match: A0A174BTY0_9FIRM (Uncharacterized conserved protein n=2 Tax=Eubacteriales TaxID=186802 RepID=A0A174BTY0_9FIRM)

HSP 1 Score: 103 bits (258), Expect = 1.420e-19
Identity = 87/299 (29.10%), Postives = 136/299 (45.48%), Query Frame = 0
Query:  579 LLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQ-RIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWY---------EGGLGEKPACCKLACDAFAADNDTLQSWIND 866
            + D    +F+C+N  V L T    P    D LT+  N+ Y+ +     E  + ++DI        +   L+E L R LGYS++    +E      G S RNGKG + S +Q ++G     A      + K  S G  +S  +A L GAR V + E   G+ LD+ +IK +SG   I+ R L+     F  +   W NTN +P I  +      R+++IP +  F   G+     D  DK    + TK RE++  A  W          EGGL + P   +   +A+ A +D +  ++ D
Sbjct:  115 IFDKQPYLFNCQNCTVNLTTGAANPHDPYDYLTKISNVWYDPEESG-EEFQKFISDIMQ------DNSELIEYLKRALGYSLSAATFQECFFITYGESTRNGKGTLNSTMQNMMGDYAKSASYETFESKKYKSGGGGTSEDIARLAGARYVSVSEPQEGMTLDSALIKMLSGNDTITARNLYEKSFEFVASFKIWINTNHLPNISDDTVFKSGRVQLIPFNRHF---GE-----DEQDKGLKARLTK-RENISGAFNWCMEGFQLMATEGGL-KVPEVIRQEIEAYRAKSDRIGMFLED 396          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354698 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YS19_9STRA0.000e+090.61D5_N domain-containing protein n=5 Tax=Tribonema m... [more]
A0A835Z1H9_9STRA9.820e-24295.63SF3 helicase domain-containing protein (Fragment) ... [more]
A0A835Z1L1_9STRA7.780e-5035.84D5_N domain-containing protein n=1 Tax=Tribonema m... [more]
UPI000AB7246B2.160e-2132.45Uncharacterized protein n=2 Tax=Croceicoccus mobil... [more]
A0A3D2VPM9_9GAMM4.120e-2125.91SF3 helicase domain-containing protein n=1 Tax=Can... [more]
A0A3C1SNC0_9GAMM2.800e-2026.67SF3 helicase domain-containing protein n=1 Tax=Can... [more]
A0A257JK46_9PROT3.360e-2027.54SF3 helicase domain-containing protein (Fragment) ... [more]
UPI001FB9F2E63.390e-2026.80phage/plasmid primase, P4 family n=1 Tax=Ligilacto... [more]
UPI0003455EE64.500e-2028.21phage/plasmid primase, P4 family n=2 Tax=unclassif... [more]
A0A174BTY0_9FIRM1.420e-1929.10Uncharacterized conserved protein n=2 Tax=Eubacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 523..543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availablePANTHERPTHR35372ATP BINDING PROTEIN-RELATEDcoord: 546..874
IPR014818Bacteriophage/plasmid primase, P4, C-terminalPFAMPF08706D5_Ncoord: 522..634
e-value: 2.4E-12
score: 47.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_416contigContig_416:6098..8967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354698mRNA_19017Tribonema minus UTEX_B_3156 mRNAContig_416 5919..8967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354698|estExt_Genemark1.C_Ctg_4160001 ID=Trimin1|354698|estExt_Genemark1.C_Ctg_4160001|Name=jgi.p|Trimin1|354698|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=947bp
MDIDDFDLRAAENGFIDDEEPPEEPPMPLATPPAAAPAAPCAPPARPSPK
RNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETF
FTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPYNADHPLAL
TAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKI
TCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYEN
NGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAK
SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNK
LTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPKCA
GSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARL
FAKLRSHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAA
YVDPQLQDLEPHLEAARAAARTRSRAEEEDEEADEDLTVLEAKAASLFAI
KESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATAT
LRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLE
RLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAP
QSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGG
ADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKF
RTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLAC
DAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPA
LPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014818Phage/plasmid_primase_P4_C