mRNA_8103 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349282
Unique Name	mRNA_8103
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349282 vs. uniprot
Match: A0A835YTJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ8_9STRA)

HSP 1 Score: 679 bits (1751), Expect = 1.640e-236
Identity = 631/631 (100.00%), Postives = 631/631 (100.00%), Query Frame = 1

Query:    1 MLPVSVLGRVSTASYAYLRDASNAELVCFGLVLFAMLFAGHQLSLHHRSSTLKSVDGTDGRFGGSDSDTRGEKDTKSDDDAVGDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTESVHSELSEEMEDGEDEQAFISSRWRMLKAAIAFWIIVVTAHMVVERATGRKLFFMKPDVDTAEDQMDAVAIQGVDPASQPLPTQATETPASSAAADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAPASGQEGDARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEXXXERERLAKEQXXXXXXXXXXAEDRERSEXXXXXRLXXXXXXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEERLRDAEASXXXXXXXXXXXXXXXXVRQQQSTVLMAGGAPLRVGEVLRWRGSELQITPIGDLELRCNGSVTFEVRASAKRPRVGTALARRLVRRPPQPPPPCDACGLRVTTEGSCDCKAQQXXXXXXXXXXXXXXXDRLELRDDAKLLWASNPRQKFSQGWEGIMELPSGEEECPSVVVRLSSLKVWDSADHPVPPSDEQ 1893
            MLPVSVLGRVSTASYAYLRDASNAELVCFGLVLFAMLFAGHQLSLHHRSSTLKSVDGTDGRFGGSDSDTRGEKDTKSDDDAVGDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTESVHSELSEEMEDGEDEQAFISSRWRMLKAAIAFWIIVVTAHMVVERATGRKLFFMKPDVDTAEDQMDAVAIQGVDPASQPLPTQATETPASSAAADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAPASGQEGDARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEXXXERERLAKEQXXXXXXXXXXAEDRERSEXXXXXRLXXXXXXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEERLRDAEASXXXXXXXXXXXXXXXXVRQQQSTVLMAGGAPLRVGEVLRWRGSELQITPIGDLELRCNGSVTFEVRASAKRPRVGTALARRLVRRPPQPPPPCDACGLRVTTEGSCDCKAQQXXXXXXXXXXXXXXXDRLELRDDAKLLWASNPRQKFSQGWEGIMELPSGEEECPSVVVRLSSLKVWDSADHPVPPSDEQ
Sbjct:    1 MLPVSVLGRVSTASYAYLRDASNAELVCFGLVLFAMLFAGHQLSLHHRSSTLKSVDGTDGRFGGSDSDTRGEKDTKSDDDAVGDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTESVHSELSEEMEDGEDEQAFISSRWRMLKAAIAFWIIVVTAHMVVERATGRKLFFMKPDVDTAEDQMDAVAIQGVDPASQPLPTQATETPASSAAADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAPASGQEGDARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEXXXERERLAKEQXXXXXXXXXXAEDRERSEXXXXXRLXXXXXXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEERLRDAEASXXXXXXXXXXXXXXXXVRQQQSTVLMAGGAPLRVGEVLRWRGSELQITPIGDLELRCNGSVTFEVRASAKRPRVGTALARRLVRRPPQPPPPCDACGLRVTTEGSCDCKAQQXXXXXXXXXXXXXXXDRLELRDDAKLLWASNPRQKFSQGWEGIMELPSGEEECPSVVVRLSSLKVWDSADHPVPPSDEQ 631

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349282 vs. uniprot

BLAST of jgi.p|Trimin1|349282 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YTJ8_9STRA	1.640e-236	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_40	contig	Contig_40:775349..784141 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349282\|estExt_Genemark1.C_Ctg_400089
Hectar predicted targeting category	signal anchor
TranscriptId	349604
Track	FilteredModels1
ProteinId	349282

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349282	gene_8103	Tribonema minus UTEX_B_3156	gene	Contig_40 775349..784141 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349282	Trimin1\|349282\|estExt_Genemark1.C_Ctg_400089	Tribonema minus UTEX_B_3156	polypeptide	Contig_40 775349..784022 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8103_1	exon_8103_1	Tribonema minus UTEX_B_3156	exon	Contig_40 775349..775698 +
exon_8103_2	exon_8103_2	Tribonema minus UTEX_B_3156	exon	Contig_40 776723..776794 +
exon_8103_3	exon_8103_3	Tribonema minus UTEX_B_3156	exon	Contig_40 777627..777747 +
exon_8103_4	exon_8103_4	Tribonema minus UTEX_B_3156	exon	Contig_40 778479..778564 +
exon_8103_5	exon_8103_5	Tribonema minus UTEX_B_3156	exon	Contig_40 779156..779771 +
exon_8103_6	exon_8103_6	Tribonema minus UTEX_B_3156	exon	Contig_40 780958..781020 +
exon_8103_7	exon_8103_7	Tribonema minus UTEX_B_3156	exon	Contig_40 781148..781304 +
exon_8103_8	exon_8103_8	Tribonema minus UTEX_B_3156	exon	Contig_40 782338..782506 +
exon_8103_9	exon_8103_9	Tribonema minus UTEX_B_3156	exon	Contig_40 782567..782638 +
exon_8103_10	exon_8103_10	Tribonema minus UTEX_B_3156	exon	Contig_40 783110..783235 +
exon_8103_11	exon_8103_11	Tribonema minus UTEX_B_3156	exon	Contig_40 783959..784141 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8103	CDS_8103	Tribonema minus UTEX_B_3156	CDS	Contig_40 775349..775698 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_8103	UTR3_8103	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_40 784023..784141 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_40:775349..784141+
coding sequence from alignment at Contig_40:775349..784141+

spliced messenger RNA

>mRNA_8103 ID=mRNA_8103|Name=jgi.p|Trimin1|349282|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2015bp|location=Sequence derived from alignment at Contig_40:775349..784141+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTCCTGTGTCGGTGCTGGGGAGGGTGTCCACGGCTTCCTACGCCTA
CCTGCGCGATGCTTCCAACGCCGAGCTGGTGTGCTTTGGCTTGGTGCTGT
TTGCAATGCTTTTTGCGGGGCACCAGTTGTCCCTGCATCACCGGTCGTCT
ACTTTGAAGTCCGTTGACGGCACAGATGGGCGCTTCGGCGGCTCAGATTC
GGATACGCGCGGCGAGAAGGACACAAAAAGCGATGACGATGCAGTCGGCG
ATGCAGAAGATGGCGACGATGCAGGAGATGGCGCTGGTGACGGCGGCGAT
GGTCGCAGCGAGGACAGTGACGATGGAAGCGGCAGCGAGGAGGGTGACAC
GGAGTCAGTGCACAGCGAATTGAGTGAGGAGATGGAGGACGGCGAGGACG
AGCAGGCTTTCATCAGCTCCAGGTGGCGCATGCTCAAGGCCGCCATCGCG
TTCTGGATCATCGTCGTGACGGCGCACATGGTCGTCGAGCGCGCCACCGG
CAGAAAGCTCTTCTTCATGAAACCCGACGTTGACACAGCGGAGGACCAGA
TGGATGCTGTCGCCATTCAAGGAGTCGACCCCGCATCTCAGCCACTGCCG
ACACAAGCGACCGAAACGCCTGCCTCCAGCGCGGCGGCGGACGTGGCCGC
CGACAAGCGCAGCGAAACGGGCGCCGCCGCCGCCGCCGCTGCTGCTGGCG
CCGATGCACGGGACGCAGCACGCGACGCGCCCGCGGCTGCGGCGCGGGCA
GCGACAGAGAGCGCACCAGCATCTGGTCAGGAGGGCGACGCGCGCGCGGC
TGCGGCAGAGCAGCGGCGGCAACGCGATGCCACGGCGGCGGCGGCGGCAG
CGGCAGCGGCGGCGGATGAGCAGCATGCACGCGCGGCAGCAGCAGCAGCA
GCACAGAGGCAAGCTGCTGAGGCAGCGGCTGCAGATGCAGCGGAGGCAGA
GAGGGAGGCGGCAGCAGCAGCGGCAGAGCGCGACCGTGAACGCGCCGCTG
CCGCCGCTGCTGCGGCCGCAGCGACGGAGGCAGCGGCGGAACGCGAACGG
CTGGCGAAGGAGCAGGCGGCGGAAAGGGCGCGCTTGGCAGCAGAGGCAGA
GGATCGCGAGCGGTCGGAAGCTGCGGAACAGGAACGGTTGGCAGAGGCAG
CGGAGCAGGAGCGGGCAGCGGCGGCAGAGGCAGCGGCGGCGGCGGCGGCG
GAGCGAGAGCGCGCAGAGGCAGAGCAGCGGCGGTTGGCGGAAGAGGCCGA
AGCAGCAGCAGCGGCAGCAGCAGCAGCGAAGCAGGCGGAGGAGGAGCGGC
TGCGCGACGCTGAAGCATCGGCGGCAGCAGCGGCGGCGCGGAAGGCGGAG
GAGGAGCGGCTGCGTGATGTGCGGCAGCAGCAGTCCACGGTGCTCATGGC
TGGCGGCGCGCCGCTGCGTGTCGGCGAGGTGCTGCGGTGGCGCGGCTCAG
AGCTGCAGATCACGCCCATCGGCGACCTGGAGCTGCGCTGCAACGGGAGC
GTCACCTTTGAAGTGCGCGCCAGCGCCAAGCGGCCGCGCGTGGGCACGGC
GCTCGCGCGGCGGCTCGTGCGCCGCCCTCCGCAGCCGCCGCCGCCGTGCG
ACGCGTGCGGCCTGCGCGTCACCACGGAGGGCAGTTGCGATTGCAAGGCG
CAGCAGGCGCCGCCGCCGTGCGGCGCGTGCGGCCTGCGCGTCACCACTGA
GGACAGGCTTGAGCTCAGGGATGACGCCAAGCTGCTGTGGGCAAGCAACC
CCAGGCAGAAGTTCTCGCAGGGTTGGGAGGGGATCATGGAGCTGCCCAGT
GGGGAAGAGGAGTGCCCCAGCGTTGTGGTCAGGTTATCAAGCCTGAAGGT
CTGGGACTCCGCAGACCATCCCGTGCCTCCATCAGATGAGCAATGATGAT
CGCCTTACAGCAGCCGGCAATGAGGGGACATCATCACCTCTGGTACCGCT
TGGCAGCAGCAGGAGGCGCCTCGTGCAACAAATGAGAAGGCGCGCAGCGC
TCATCAATAATCAGC

protein sequence of jgi.p|Trimin1|349282

>Trimin1|349282|estExt_Genemark1.C_Ctg_400089 ID=Trimin1|349282|estExt_Genemark1.C_Ctg_400089|Name=jgi.p|Trimin1|349282|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=632bp
MLPVSVLGRVSTASYAYLRDASNAELVCFGLVLFAMLFAGHQLSLHHRSS
TLKSVDGTDGRFGGSDSDTRGEKDTKSDDDAVGDAEDGDDAGDGAGDGGD
GRSEDSDDGSGSEEGDTESVHSELSEEMEDGEDEQAFISSRWRMLKAAIA
FWIIVVTAHMVVERATGRKLFFMKPDVDTAEDQMDAVAIQGVDPASQPLP
TQATETPASSAAADVAADKRSETGAAAAAAAAGADARDAARDAPAAAARA
ATESAPASGQEGDARAAAAEQRRQRDATAAAAAAAAAADEQHARAAAAAA
AQRQAAEAAAADAAEAEREAAAAAAERDRERAAAAAAAAAATEAAAERER
LAKEQAAERARLAAEAEDRERSEAAEQERLAEAAEQERAAAAEAAAAAAA
ERERAEAEQRRLAEEAEAAAAAAAAAKQAEEERLRDAEASAAAAAARKAE
EERLRDVRQQQSTVLMAGGAPLRVGEVLRWRGSELQITPIGDLELRCNGS
VTFEVRASAKRPRVGTALARRLVRRPPQPPPPCDACGLRVTTEGSCDCKA
QQAPPPCGACGLRVTTEDRLELRDDAKLLWASNPRQKFSQGWEGIMELPS
GEEECPSVVVRLSSLKVWDSADHPVPPSDEQ*

mRNA from alignment at Contig_40:775349..784141+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8103 ID=mRNA_8103|Name=jgi.p|Trimin1|349282|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8793bp|location=Sequence derived from alignment at Contig_40:775349..784141+ (Tribonema minus UTEX_B_3156 )
ATGCTTCCTGTGTCGGTGCTGGGGAGGGTGTCCACGGCTTCCTACGCCTA
CCTGCGCGATGCTTCCAACGCCGAGCTGGTGTGCTTTGGCTTGGTGCTGT
TTGCAATGCTTTTTGCGGGGCACCAGTTGTCCCTGCATCACCGGTCGTCT
ACTTTGAAGTCCGTTGACGGCACAGATGGGCGCTTCGGCGGCTCAGATTC
GGATACGCGCGGCGAGAAGGACACAAAAAGCGATGACGATGCAGTCGGCG
ATGCAGAAGATGGCGACGATGCAGGAGATGGCGCTGGTGACGGCGGCGAT
GGTCGCAGCGAGGACAGTGACGATGGAAGCGGCAGCGAGGAGGGTGACAC
GTAAGCTTCACGTGCATTGCATGCATCAGCCAAGGAGCAATCTTATGCAA
CTTGTCATGCAGCGTCGCTGAGACAGCACCAGCATCACAACCACGCTGCA
GTATAGAGCGTAATCCGCGTGTGTTGTACGTGCTTGCTATTGCAGTCATG
TGTTTCTTGACCTGATTCGCACCGCGCAATTGCTGGCATCGTTAGAACAA
AACGCAGCAGGTCCTGTAGTTGAAGTGAATGCAGCAGCTTGCAGGTTTCG
CGTGATTTCCACTACCCACATCTACTTGCCATGTTGCTTCTTCAATACGC
TCCTGTACATTATTGTAGGTGTGACTCCGCTTCTGATGGGCATGCGTGTC
ACGGACTGTCGTCGAAGTACCGCACATAAAAGGTGTTGTTGCCTGGTGTG
AGGAAGAATGTCAGACGTCATCACGACAGCGACATGCTGCTCTTGTGGTC
AAAGTGCACCCATGGTTGTGCGACGCAGCTCTCGGCCGGTTGTCATGCAC
AGGAAGTGCACATTAGGTCATGTGCGGGAAGTGCGCATCACGTTATTCGC
CTTCATCTTGCCTGCGGGCACGCCAGTGCCACTGCCGACTCGTGCTGCTG
ATCACCAGGCCTTCCCAGCTGAGCGGCGTGATCACAGAGACGCGGCGCTC
ACAGGCCTGCAGCAACGCTCTGCGCGCGTGCGCGGCATGCCATGATGCAC
GCAAACCCGGTGTGAAGGCGCAATGTGCGTCTCACAGGCCCACAGCACGC
TCTGCGCACGTGCGGTCCGCCATAATGCATGCAAGCCCAGCGTGATGGCG
TGCAGTCATTCTCGCGCTCAGCGCCTGCCATGGTCTGCACCGGCAAGGAC
CACCCCAGCGAGCCCTGCACTGATTTTGTGTTGTGCTCGCGGCAGTGAAC
CTTGTCCTGCGCTGTGATCCTCGCGGCTTCATTGCTGCACGTGGTAGTGT
ACTCCGTCCTCCGCTGTCGATTCTCACAGCTTCGTCGCTGCTGACACACT
TGTTGATCATCACCGCCGCCGCAGGGAGTCAGTGCACAGCGAATTGAGTG
AGGAGATGGAGGACGGCGAGGACGAGCAGGCTTTCATCAGCTCCAGGTGA
GTCAAAGGAGCGCCTAAAAAACAACAGGTTCAAGCCATGATAACTACAAC
CTGAAGCTCTATGGGTGTCTTGCTGGGAGCCTGCTCGGGATGTCTTTGTA
GTACTGACTGAGTCAAGTGGAGCGCTTTTGCTTCCACACAGCACTTGACC
ATGCATCCAGGCTGGCTTACAGGTATACCTCCCATGTCATAGATGAGCTC
TCCGCCTGCTGTCGTGAGTTCGTTGGGGCACTGTCACTTTGTGCAGTGGT
TTATACAAGCACGCTTTTCATCACTGTTGGATATTGGGCACGTCTGACAC
GCTGTTGGTGACCACTACGGTGGATGGTAAGCAGCGGTCTGCGATGCGCC
GTTCTCAAGCTATCTTTTTCAGAGATGCAGGAGTATCATGGCGTGATTCC
ACGCAGGTGCGCACTCTGCACAGTTCATACCCCTATTGCGTACATAACCG
CTAGTAGTGATTGCGCATTGGTGGAAGGCACTTGCGGCTCACCACCCCTT
GTCACTTAGAGCTCTACGATCTTGAGAATCGTTTCCGTTGCATGTTCAAT
GGCATTGCTGTTGTGATACGCCAAAACGCCTGTCATGTGCACAGGTTCTG
CGCGGCCCATCATGGCCCCACGTCAACATGTTTTGAAGTTGCAGTTGAAG
TTGATTTGATCAAGTTTGTGTGCACTCTCAGACGTGGCAGTCATGCTGCT
CTGGTGTCGTGACGTTGACATCAGCAGAGGGAGCAGCGCCTGTGGCATCA
CTGAGGCGCCATCAGGCCAGAGCCGATGAAGTGCGCACTGCTGTTTGATC
TGTAACTGACGTCTGTAACTGCCGCCAGGTGGCGCATGCTCAAGGCCGCC
ATCGCGTTCTGGATCATCGTCGTGACGGCGCACATGGTCGTCGAGCGCGC
CACCGGCAGAAAGCTCTTCTTCATGAAACCCGACGTTGACACAGCGGAGG
TACTGTATAGTCTACACAATTCATCAATGATTATTCTAATCTGACAAAGC
TGAAGTACCTGTCGCACGTCACGCTAATTGCGGGCACAGGCGCTCACTGT
ACTTCGGCGGCACGTCCCATGTTGCAGACAAGTGCTGTGTTGGTGGTAAT
CTTAGTCATGAACCACAGGGCAACACAGAGCTGCGCGTCAATTGCTGCTG
GGCCTGCCGCAGGTAGCGTTAGGCTTACCGGTAGGGTTAGGTCTCGCTCA
TTGCAATGCTGTCGGCAGTTATAGCTGCTGCCAAGGCAAGTGTGTATGCG
GTCACATGCAGCTATGGCTGCGGCACGTCCACGTCGTGGTCAGCTACTGC
TGAGGCCTATATGCGTTTCGTACACACAGGATTGGATTCTTGTGAGCATA
CCTTAAGGTGAGTGCATTGGGAATGGAGTCACAGGGTCTATGATGCAGCT
AGGACTCGATTCAATGAGGTTGGGAGCATCATCGCAAGTCTGAATCACAG
TGACATCGACGCATGTAGAGGGAAATGTGCCGCACCATCTCCATCATACG
TGCAGACGCATGTACTGTCGCTACTGGTGGTGCAAGTGCAGCTGTTGCAC
GTACACCTACTTAGATACCGTGGAACTTCTGAATGATCGAGCATTTTGCT
GTACCCATGTGCTTCTTTTTGTGAAAGAGTCTTCTCCTCATTTTGCTTCT
TTTGCTGGCGCTTTGCTTACGCTGGTGCAGGACCAGATGGATGCTGTCGC
CATTCAAGGAGTCGACCCCGCATCTCAGCCACTGCCGACACAAGCGACCG
AAACGCCTGCCTCCAGGTGTGTACACCTCCAAGTGCAAAGCATGACTTTT
TCAAAATGTTTCTAAGCATGCGCTGTGCCTGTTGTGCTGAGCGCTGCTGC
TGCGTTTCTGTGCGTCGCCGCTCGATTGCTCCGCTTGTGCTGCACACGCT
TATCGTGTAGTTGCGCATACGGTCTGCTCTCACTCAGGGGGCGGCAAATG
GGGGGAGTACGCGCGTGCAGGTGCCCCAGCGCCAACTGCAGGTGATCCGC
ACAGCAGCAGCGCTCAGCACACCAGGCGCTTCGCTGCTCCGCGGCAGACC
AGCGACGCAGGCCGCCGCTGTCGCCGGCGTGATCTGCTGCGCATTGCTGC
CATGCAATACTAGCCATGTCGAATGATGACCTGCGCGTGTTCTCTTGTTT
ATGCATGCGCATGCCAGCGCTGCGGCGACGGCGGCAGGGGGAAGCGGCCG
ATGGCGCACCTGTGCAGCGCGTCGCATTGCCGCCGATGTCGTACTTGCAT
GTGGCTGCAAAATTGCTCATGGTGAGCATGTAGCAGCGCTCCGCGCGCAA
CTACAGGTGTCTGCAGAAGTGCTCACAGTGACGCACTGCGCGCTTCTGTC
CTGACAGCGCGGCGGCGGACGTGGCCGCCGACAAGCGCAGCGAAACGGGC
GCCGCCGCCGCCGCCGCTGCTGCTGGCGCCGATGCACGGGACGCAGCACG
CGACGCGCCCGCGGCTGCGGCGCGGGCAGCGACAGAGAGCGCACCAGCAT
CTGGTCAGGAGGGCGACGCGCGCGCGGCTGCGGCAGAGCAGCGGCGGCAA
CGCGATGCCACGGCGGCGGCGGCGGCAGCGGCAGCGGCGGCGGATGAGCA
GCATGCACGCGCGGCAGCAGCAGCAGCAGCACAGAGGCAAGCTGCTGAGG
CAGCGGCTGCAGATGCAGCGGAGGCAGAGAGGGAGGCGGCAGCAGCAGCG
GCAGAGCGCGACCGTGAACGCGCCGCTGCCGCCGCTGCTGCGGCCGCAGC
GACGGAGGCAGCGGCGGAACGCGAACGGCTGGCGAAGGAGCAGGCGGCGG
AAAGGGCGCGCTTGGCAGCAGAGGCAGAGGATCGCGAGCGGTCGGAAGCT
GCGGAACAGGAACGGTTGGCAGAGGCAGCGGAGCAGGAGCGGGCAGCGGC
GGCAGAGGCAGCGGCGGCGGCGGCGGCGGAGCGAGAGCGCGCAGAGGCAG
AGCAGCGGCGGTTGGCGGAAGAGGTACGCACAGCAGCTGATGAATGCTGT
TTGTCATCGATTTATCTTTTTCGCAAGGTTGTATTAGCAAGTGCGCATGG
TATGAGCGTGCTTTGACGATTCGCTTTGCTGGCAGTCAGAGCGGACCGGC
TGGCCAGTCCAACGTTGGCTACTTTGAGGTGAATGCTATCTGTCAGTGGT
TTGTCGCTTGAGAGGTCGTATTAATGAGTGTGCGTGCCATGTTCAGCGCG
CTTCGACGATACGTTTTGCTGCACACAAAGCTTTCAAATTGGGTGAGCTT
CGGGCAAGCTAGTGGAATGCACCCAGACCAAAGAGGTGTGGCGTGTTGCT
TTACATTCTGTGAATTGTGTGGTGACGTCAAGTGTAACAGCAACCGCGGC
AGGCTTTGAAGTTGAACTTGAACTTTGCAGGAGCGTCACTTTTTGGCGTC
TTGACCCAGTCACTTGTGCCGACACACCGCCACTACGCAGGCTTTGCCAA
GATATGTTACAATGTTTCCAGCTAAAACGTTGCTGCCCTGGCATCGTTAC
ACTGGTAGCAACCATACCTGCTTAGATGCAGCAGCTGGTGCTACTGACTC
CTCTTTGTAGCCTACCCGCGTTGAGACCGCACACGCGCAGCAGATATGTG
TAACTTCAACTTCATACCTTCTTGCCGCTCTGCAAGAGCATGTACAGCAC
CAGCAGCAACCTCGCTCCAGCCACTGCGGCTGCCAGCGCACGCAAGCGCA
GTCAACCGTGTCACAGCGCCGCAGTTCCTCGGCCGTGTGATGTCGGGTCA
GGGTCAGCTGCCGCAGCCCGCACAGCCCACAGCAGGACTAGACTATGCGC
GCCTCTAGCCGCCTCCTTTCTTGTTGTTGTGGCAAGTTGGTCTGCGGGCA
TGGCATCCACTCTAGAGTTGTCGAGGGTTGCCCCGCTATCGGAGCTGACA
ACAGCTCTCATGAGCTCCAGGGGTTGACCTAGCCAAGTACGGTTTGTCGC
AGGTGGCGACAATCTTTCGAGAAATCTCTGTCCTCTGAAGGTCACGCAGC
ACACCTGGAGGCACCAGCAGTGATTCATACTTGCTATTTCATGTTCAATT
AGAGCTCCGCTCCCCTGCATTGTAAACTATTAGCTGATGACATCATCCGC
ACATTGTAAACTGTACCGAAATTCTCACTCAAATGAAGTAGCGGCTCCGC
CACCGACAGGCCGAAGCAGCAGCAGCGGCAGCAGCAGCAGCGAAGCAGGC
GGAGGAGGAGCGGCTGCGCGACGTGCGGCAGCAGCAGTCCACAGTGCTCA
GACAAACAAGTACTCATCCGATCACAATTATCCAATGAGATCTCGTCAAC
TGAGAGTACACTTTGCACTCACATGAAGAATCTGCTCTTCCACCGACAGG
CTGAAGCATCGGCGGCAGCAGCGGCGGCGCGGAAGGCGGAGGAGGAGCGG
CTGCGTGATGTGCGGCAGCAGCAGTCCACGGTGCTCATGGCTGGCGGCGC
GCCGCTGCGTGTCGGCGAGGTGCTGCGGTGGCGCGGCTCAGAGCTGCAGA
TCACGCGTGAGTTGCATACACAGTACATGCCTTGAATGCTGTGTATACTA
GGGGTTTAGATTCTGCACAAGTTGCCCATGTTGCTTCGTGCTTGAGCTCA
TGCTGTGGTCAGAGTATGGTGTCAACCGCAGCCTGGTTAGGGTTAGGGTT
AGGGTTAGAGTGAGAGTATGGTGTCGCGGCTTCAAGCTCCAGATCACGCG
TCAATTGCATACCATATGTGCCGGCGTGCGATACGTTCATTAAAGTGTAT
TAGATAATCACGAATTCCGGATCGCCACGAGTCACCTGCAACACGTACTT
GCATGCTGCGTTGAGATTTGCTGCATACATGAGGGGAAGGCGTTGTGCAG
CGGCAATGTTGCTAACATATATAGTGGAGGGGGAGATGTCATATGGCGGT
GTCGTTTAGATTCGATTGTCAATGCGCATTGATACACTGTCAAGTCGTTA
CAAGATACATTTAGAGTTTGGTAGGAAGCTGGACGCCAAGAGCATTCATT
CATTCATGCATCAGTTCATGTGCGCCTGCAGCCATCGGCGACGTGGAGCT
GTGCTGCAACAATAGCGTCACCTGTCAAGTGCGCACCGGCATCCATTCAC
ACATTCATTCGTTCATCCATTCATTCACTCATTCATGCTGCGACCCCCTG
TGCGGCGCGCAGCCATCGGCGTGACCTGGAGCTGCGCCGCGATGTGCGCC
TCGCCTCCCACATGCGCGCTGACATTCATGCGCACATTCATTCATTCATT
CATTCATTCATCAATTCATGCGCGCCCGCAGCCGTTGGCGACCTGGAGCT
GCGCTGCAATGGGCGCCTGGCCTTCCGGGTACGCATCAACATTCATTCAC
GCATTCACTCGCTCATTCATTCATGCATTCACTGCGGACCTCCGCGCCTG
CAGCCATTGGCGACCTGGAGCTGCGCTGCAACGGGAGCGTCACCTTTGAA
GTTCGCGCCAGCATTCATTCACACATTCAATGATTAATTCAGTCATCCAC
TCATTCCTTCATTTCGCACTGCGACCCCCGCGCCCGCAGCCATCGGCGAC
CTGGAGCTGCGCTGCAACGGGAGCGTCACCTTTGAAGTGCGCGCCAGCGC
CAAGCGGCCGCGCGTGGGCACGGCGCTCGCGCGGCGGCTCGTGCGCCGCC
CTCCGCAGCCGCCGCCGCCGTGCGACGCGTGCGGCCTGCGCGTCACCACG
GAGGGCAGGTACGCACGTGTCAACGCTCAGCTGGTGTGCTTCTGCGATTG
CGTACATGTGTGTGTGAGTTGCGATTGCAAGGCGCAGCAGGCGCCGCCGC
CGTGCGGCGCGTGCGGCCTGCGCGTCACCACTGAGGACAGGTGGGCATGG
AACAGCTCGTGCCTTTCTTTGTGCATGTATGTGTTTGGTTTGCGTATTGC
TATACTTCAAGGTGTAGAAGTGTATGAACATGTTGTCAGAATTTATCGCC
GTCGGAATTGGCGAGCGCGAGCCGCAGGCGCTCCCGCCGTACGACGCGGA
CGGTCTGGCAGGCGTGACAACGCTCAGCAACTGTGCCTCAGTGATTGTGT
ACATGTGAGTGCGGCACTATTGCGAGGCGCGGCAGCGCCGGTTATTGAGA
AGACTCTAGTGGCAATATGGATGGCTATGTTTGCTATTGCACAATTCAGC
TCGGGGATGGCATACAGGACACATGCACTTGCCGGAGTACAATGCACCAT
CCATGCCTGCAAATTACTTGTAGACGTGGAGCAACCATGATGGTTTTGGA
AAGCAAGTGCTCATACATCTCATCATCTGTACAAAACGCGCTGCTTCATT
TCCACAATCAGGCTTGAGCTCAGGGATGACGCCAAGCTGCTGTGGGCAAG
CAACCCCAGGCAGAAGTTCTCGCAGGGTTGGGAGGGGATCATGGAGCTGC
CCAGTGGGGAAGAGGAGTGCCCCAGCGTTGTGGTCAGGTACGTCACCTGG
TGAATTTGGATTCAGATGTGTATGGTAGCCGCAAATGCACCCAGCTCTGT
TGCCAGGCTTGTCACCTGTTGAACTTGGGCTCAAATGTGTACCTCACCTT
TGTCAAATGCACCCCAGCTACTTTGTGGTTAGGCTCGTCACCTGTTGAGA
CTTGAGCTCAAATGAGTGTTTCAGCTTTGTCAGGCCCGTCACCCGTTGAC
TCTGAGTTCAAATGTGGTTGGTAGCGGCCATTCGCGAGCGCTTTCTGCAC
ATTGCTCGCGGCTTGCATCTTTGAAAACAGAGCCCGCGTCTGAGCTGCCG
TCGAGGGTGGGGCACACTGGTACCCAACCCCCACGCAAACATACGTTATT
CGAAGTATGCGTTTGCACCGGGGCACATCTGCCCTGACACGGGCCTACAC
ACCAGCCCAGGGAGTTCAGCAAAATTTGGCAACGCAGGTATGCAGCATTT
AGCATGCCAAATCTGCCGCCGTCGCCGCTGCTGCTGCTGCTGCTGCTGTC
GCTGCTTCTGCTGCTGCTGTCGCTGCTTCTGCTGCTGCCGCTACTGCTAC
TGCTGCGGCTGCTGAGCGTCCACGGTGCTGCTGCTGCTGACCCTGCTGAT
CCTGCTGCTGCCGCTACTGCTGCTGCTGCTGCCGCTACTGCTGCTGCTGC
TGAGCCTCCATGCTGCTGCTGCTGATCCTGCCGCCGCCGTGCTCTCATTC
GTTGTCGCAGGTTATCAAGCCTGAAGGTCTGGGACTCCGCAGACCATCCC
GTGCCTCCATCAGATGAGCAATGATGATCGCCTTACAGCAGCCGGCAATG
AGGGGACATCATCACCTCTGGTACCGCTTGGCAGCAGCAGGAGGCGCCTC
GTGCAACAAATGAGAAGGCGCGCAGCGCTCATCAATAATCAGC

Coding sequence (CDS) from alignment at Contig_40:775349..784141+

>mRNA_8103 ID=mRNA_8103|Name=jgi.p|Trimin1|349282|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1896bp|location=Sequence derived from alignment at Contig_40:775349..784141+ (Tribonema minus UTEX_B_3156 )
ATGCTTCCTGTGTCGGTGCTGGGGAGGGTGTCCACGGCTTCCTACGCCTA
CCTGCGCGATGCTTCCAACGCCGAGCTGGTGTGCTTTGGCTTGGTGCTGT
TTGCAATGCTTTTTGCGGGGCACCAGTTGTCCCTGCATCACCGGTCGTCT
ACTTTGAAGTCCGTTGACGGCACAGATGGGCGCTTCGGCGGCTCAGATTC
GGATACGCGCGGCGAGAAGGACACAAAAAGCGATGACGATGCAGTCGGCG
ATGCAGAAGATGGCGACGATGCAGGAGATGGCGCTGGTGACGGCGGCGAT
GGTCGCAGCGAGGACAGTGACGATGGAAGCGGCAGCGAGGAGGGTGACAC
GGAGTCAGTGCACAGCGAATTGAGTGAGGAGATGGAGGACGGCGAGGACG
AGCAGGCTTTCATCAGCTCCAGGTGGCGCATGCTCAAGGCCGCCATCGCG
TTCTGGATCATCGTCGTGACGGCGCACATGGTCGTCGAGCGCGCCACCGG
CAGAAAGCTCTTCTTCATGAAACCCGACGTTGACACAGCGGAGGACCAGA
TGGATGCTGTCGCCATTCAAGGAGTCGACCCCGCATCTCAGCCACTGCCG
ACACAAGCGACCGAAACGCCTGCCTCCAGCGCGGCGGCGGACGTGGCCGC
CGACAAGCGCAGCGAAACGGGCGCCGCCGCCGCCGCCGCTGCTGCTGGCG
CCGATGCACGGGACGCAGCACGCGACGCGCCCGCGGCTGCGGCGCGGGCA
GCGACAGAGAGCGCACCAGCATCTGGTCAGGAGGGCGACGCGCGCGCGGC
TGCGGCAGAGCAGCGGCGGCAACGCGATGCCACGGCGGCGGCGGCGGCAG
CGGCAGCGGCGGCGGATGAGCAGCATGCACGCGCGGCAGCAGCAGCAGCA
GCACAGAGGCAAGCTGCTGAGGCAGCGGCTGCAGATGCAGCGGAGGCAGA
GAGGGAGGCGGCAGCAGCAGCGGCAGAGCGCGACCGTGAACGCGCCGCTG
CCGCCGCTGCTGCGGCCGCAGCGACGGAGGCAGCGGCGGAACGCGAACGG
CTGGCGAAGGAGCAGGCGGCGGAAAGGGCGCGCTTGGCAGCAGAGGCAGA
GGATCGCGAGCGGTCGGAAGCTGCGGAACAGGAACGGTTGGCAGAGGCAG
CGGAGCAGGAGCGGGCAGCGGCGGCAGAGGCAGCGGCGGCGGCGGCGGCG
GAGCGAGAGCGCGCAGAGGCAGAGCAGCGGCGGTTGGCGGAAGAGGCCGA
AGCAGCAGCAGCGGCAGCAGCAGCAGCGAAGCAGGCGGAGGAGGAGCGGC
TGCGCGACGCTGAAGCATCGGCGGCAGCAGCGGCGGCGCGGAAGGCGGAG
GAGGAGCGGCTGCGTGATGTGCGGCAGCAGCAGTCCACGGTGCTCATGGC
TGGCGGCGCGCCGCTGCGTGTCGGCGAGGTGCTGCGGTGGCGCGGCTCAG
AGCTGCAGATCACGCCCATCGGCGACCTGGAGCTGCGCTGCAACGGGAGC
GTCACCTTTGAAGTGCGCGCCAGCGCCAAGCGGCCGCGCGTGGGCACGGC
GCTCGCGCGGCGGCTCGTGCGCCGCCCTCCGCAGCCGCCGCCGCCGTGCG
ACGCGTGCGGCCTGCGCGTCACCACGGAGGGCAGTTGCGATTGCAAGGCG
CAGCAGGCGCCGCCGCCGTGCGGCGCGTGCGGCCTGCGCGTCACCACTGA
GGACAGGCTTGAGCTCAGGGATGACGCCAAGCTGCTGTGGGCAAGCAACC
CCAGGCAGAAGTTCTCGCAGGGTTGGGAGGGGATCATGGAGCTGCCCAGT
GGGGAAGAGGAGTGCCCCAGCGTTGTGGTCAGGTTATCAAGCCTGAAGGT
CTGGGACTCCGCAGACCATCCCGTGCCTCCATCAGATGAGCAATGA