Trimin1|349282|estExt_Genemark1.C_Ctg_400089 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349282
Unique Name	Trimin1\|349282\|estExt_Genemark1.C_Ctg_400089
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	632

Homology

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BLAST of jgi.p|Trimin1|349282 vs. uniprot
Match: A0A835YTJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ8_9STRA)

HSP 1 Score: 677 bits (1748), Expect = 1.130e-236
Identity = 631/631 (100.00%), Postives = 631/631 (100.00%), Query Frame = 0

Query:    1 MLPVSVLGRVSTASYAYLRDASNAELVCFGLVLFAMLFAGHQLSLHHRSSTLKSVDGTDGRFGGSDSDTRGEKDTKSDDDAVGDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTESVHSELSEEMEDGEDEQAFISSRWRMLKAAIAFWIIVVTAHMVVERATGRKLFFMKPDVDTAEDQMDAVAIQGVDPASQPLPTQATETPASSAAADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAPASGQEGDARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEXXXERERLAKEQXXXXXXXXXXAEDRERSEXXXXXRLXXXXXXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEERLRDAEASXXXXXXXXXXXXXXXXVRQQQSTVLMAGGAPLRVGEVLRWRGSELQITPIGDLELRCNGSVTFEVRASAKRPRVGTALARRLVRRPPQPPPPCDACGLRVTTEGSCDCKAQQXXXXXXXXXXXXXXXDRLELRDDAKLLWASNPRQKFSQGWEGIMELPSGEEECPSVVVRLSSLKVWDSADHPVPPSDEQ 631
            MLPVSVLGRVSTASYAYLRDASNAELVCFGLVLFAMLFAGHQLSLHHRSSTLKSVDGTDGRFGGSDSDTRGEKDTKSDDDAVGDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTESVHSELSEEMEDGEDEQAFISSRWRMLKAAIAFWIIVVTAHMVVERATGRKLFFMKPDVDTAEDQMDAVAIQGVDPASQPLPTQATETPASSAAADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAPASGQEGDARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEXXXERERLAKEQXXXXXXXXXXAEDRERSEXXXXXRLXXXXXXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEERLRDAEASXXXXXXXXXXXXXXXXVRQQQSTVLMAGGAPLRVGEVLRWRGSELQITPIGDLELRCNGSVTFEVRASAKRPRVGTALARRLVRRPPQPPPPCDACGLRVTTEGSCDCKAQQXXXXXXXXXXXXXXXDRLELRDDAKLLWASNPRQKFSQGWEGIMELPSGEEECPSVVVRLSSLKVWDSADHPVPPSDEQ
Sbjct:    1 MLPVSVLGRVSTASYAYLRDASNAELVCFGLVLFAMLFAGHQLSLHHRSSTLKSVDGTDGRFGGSDSDTRGEKDTKSDDDAVGDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTESVHSELSEEMEDGEDEQAFISSRWRMLKAAIAFWIIVVTAHMVVERATGRKLFFMKPDVDTAEDQMDAVAIQGVDPASQPLPTQATETPASSAAADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAPASGQEGDARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEXXXERERLAKEQXXXXXXXXXXAEDRERSEXXXXXRLXXXXXXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEERLRDAEASXXXXXXXXXXXXXXXXVRQQQSTVLMAGGAPLRVGEVLRWRGSELQITPIGDLELRCNGSVTFEVRASAKRPRVGTALARRLVRRPPQPPPPCDACGLRVTTEGSCDCKAQQXXXXXXXXXXXXXXXDRLELRDDAKLLWASNPRQKFSQGWEGIMELPSGEEECPSVVVRLSSLKVWDSADHPVPPSDEQ 631

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349282 vs. uniprot

BLAST of jgi.p|Trimin1|349282 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YTJ8_9STRA	1.130e-236	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 299..333
None	No IPR available	COILS	Coil	Coil	coord: 357..454
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..413
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..413
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..285

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_40	contig	Contig_40:775349..784022 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349282	mRNA_8103	Tribonema minus UTEX_B_3156	mRNA	Contig_40 775349..784141 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349282|estExt_Genemark1.C_Ctg_400089 ID=Trimin1|349282|estExt_Genemark1.C_Ctg_400089|Name=jgi.p|Trimin1|349282|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=632bp
MLPVSVLGRVSTASYAYLRDASNAELVCFGLVLFAMLFAGHQLSLHHRSS
TLKSVDGTDGRFGGSDSDTRGEKDTKSDDDAVGDAEDGDDAGDGAGDGGD
GRSEDSDDGSGSEEGDTESVHSELSEEMEDGEDEQAFISSRWRMLKAAIA
FWIIVVTAHMVVERATGRKLFFMKPDVDTAEDQMDAVAIQGVDPASQPLP
TQATETPASSAAADVAADKRSETGAAAAAAAAGADARDAARDAPAAAARA
ATESAPASGQEGDARAAAAEQRRQRDATAAAAAAAAAADEQHARAAAAAA
AQRQAAEAAAADAAEAEREAAAAAAERDRERAAAAAAAAAATEAAAERER
LAKEQAAERARLAAEAEDRERSEAAEQERLAEAAEQERAAAAEAAAAAAA
ERERAEAEQRRLAEEAEAAAAAAAAAKQAEEERLRDAEASAAAAAARKAE
EERLRDVRQQQSTVLMAGGAPLRVGEVLRWRGSELQITPIGDLELRCNGS
VTFEVRASAKRPRVGTALARRLVRRPPQPPPPCDACGLRVTTEGSCDCKA
QQAPPPCGACGLRVTTEDRLELRDDAKLLWASNPRQKFSQGWEGIMELPS
GEEECPSVVVRLSSLKVWDSADHPVPPSDEQ*