mRNA_4742 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|6986
Unique NamemRNA_4742
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: A0A836CMJ2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ2_9STRA)

HSP 1 Score: 522 bits (1344), Expect = 2.640e-184
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1 
Query:  187 MACNPFFAMLPIGFFIVFIWGRLGGLWGAIHEISRPQPRSIDDSSRRKYAVRRPGREKFVNFWVVRLRQGGDSPPPEPPSGGLWNSAFNSLWGTSQNGGGLSAASGSGSSVLGTGAAAAPVASPPRPPQFEVKLCITQGVTIDEVKERASQALLEEGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCRADFNADFDDDGNAVDAEGGGGGVVDGDALSADVESGIIAQQPGASTAARXXXXXXXXXXXXXXXXXAAGAXXXXXXXXXXXXXXXXXXXXASVREAPPLVAPIRSI 1101
            MACNPFFAMLPIGFFIVFIWGRLGGLWGAIHEISRPQPRSIDDSSRRKYAVRRPGREKFVNFWVVRLRQGGDSPPPEPPSGGLWNSAFNSLWGTSQNGGGLSAASGSGSSVLGTGAAAAPVASPPRPPQFEVKLCITQGVTIDEVKERASQALLEEGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCRADFNADFDDDGNAVDAEGGGGGVVDGDALSADVESGIIAQQPGASTAARXXXXXXXXXXXXXXXXXAAGAXXXXXXXXXXXXXXXXXXXXASVREAPPLVAPIRSI
Sbjct:    1 MACNPFFAMLPIGFFIVFIWGRLGGLWGAIHEISRPQPRSIDDSSRRKYAVRRPGREKFVNFWVVRLRQGGDSPPPEPPSGGLWNSAFNSLWGTSQNGGGLSAASGSGSSVLGTGAAAAPVASPPRPPQFEVKLCITQGVTIDEVKERASQALLEEGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCRADFNADFDDDGNAVDAEGGGGGVVDGDALSADVESGIIAQQPGASTAARXXXXXXXXXXXXXXXXXAAGAXXXXXXXXXXXXXXXXXXXXASVREAPPLVAPIRSI 305
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BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: A0A836CNW5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW5_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.800e-36
Identity = 94/232 (40.52%), Postives = 121/232 (52.16%), Query Frame = 1 
Query:  211 MLPIGFFIVFIWGRLGGLW----GAIHEISRPQPRSIDDSSRRKYAVRRPGREKFVNFWVVRLRQG---GDSPPPEPPSGGLWNSAFNSLWGTSQNGGGLSAASGSGSS---------------------------VLGTGAAAAPVASPPRPPQFEVKLCITQGVTIDEVKERASQALLEEGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCRADFNADF 804
            M+P+   +V IW R+GGLW    GA+     P+   +D+SSRRK+AVRR GR++F++F V ++ Q    G    P  P   L  SA             ++ A   GSS                           V G   +AA   +      + +K  +T GVT   V  + SQA LE+GCSICLQGF    PIT VPC HLYHA+CLR+WLVLHTTCP CRADFN+DF
Sbjct:    1 MVPVSCVVVLIWSRVGGLWSPLAGAVAAGGAPR---MDESSRRKWAVRRVGRDRFIHFLVTKVAQEQEPGQQTQPHSPQ--LQRSA-------------VAEAPAHGSSGXXXXXXXXXXXXXXXXXXXXXXSVTIVAGVQDSAACAHA-----AYRIKTVLTAGVTPQAVSAQVSQAALEQGCSICLQGFDTADPITRVPCHHLYHARCLRKWLVLHTTCPECRADFNSDF 209
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BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: S8CQ10_9LAMI (RING-type domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CQ10_9LAMI)

HSP 1 Score: 61.6 bits (148), Expect = 2.090e-8
Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 1 
Query:  604 VTIDEVKERASQALLEEGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCRADFNADFDDD 813
            V I+E +E  S+  L  GC+IC   FS    +  +PC HLYH +C+ RWL    TCP CR     D +DD
Sbjct:   23 VAIEEEEEEDSR--LNPGCAICKDSFSVGSLVKQLPCFHLYHPRCISRWLSTKNTCPLCRYQLPTDNEDD 90
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BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: A0A8J5C0G5_ZINOF (RING-type domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5C0G5_ZINOF)

HSP 1 Score: 62.8 bits (151), Expect = 3.670e-8
Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:  652 EGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCR 783
            + CSICLQ F  T  +  +PCGHL+HA CL++WLV + +CP CR
Sbjct:  111 DSCSICLQDFGTTTRVLAMPCGHLFHAACLKKWLVRNCSCPLCR 154
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BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: A0A2I0W5V0_9ASPA (RING-type E3 ubiquitin transferase n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W5V0_9ASPA)

HSP 1 Score: 59.7 bits (143), Expect = 2.110e-7
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1 
Query:  586 LCITQGVTIDEVKERA-------SQALLEEGCSICLQGFSHTHPIT-LVPCGHLYHAKCLRRWLVLHTTCPSCRAD 789
            L +T  +T +E++ R         +   EE CS+CL  F     +  L+ C H YHA C+ RWL+LH +CP CRAD
Sbjct:   37 LVVTGKMTKEELERRIPARRYERKEGKGEEECSVCLSAFLDGQRVRRLLDCNHCYHASCIDRWLMLHASCPICRAD 112
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BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: W6KXH6_9TRYP (RING-type domain-containing protein n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6KXH6_9TRYP)

HSP 1 Score: 63.2 bits (152), Expect = 3.550e-7
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 1 
Query:  634 SQALLEEGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCR 783
            + A +E+ C ICL  FS    +  +PCGHL+H +C+R WL +H  CP CR
Sbjct:  243 TSASVEQACGICLDDFSEGERVKRLPCGHLFHGRCVRHWLHMHNDCPMCR 292
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BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: A0A103YIF9_CYNCS (RING-type domain-containing protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103YIF9_CYNCS)

HSP 1 Score: 59.7 bits (143), Expect = 3.620e-7
Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:  655 GCSICLQGFSHTHPITLVP-CGHLYHAKCLRRWLVLHTTCPSCR 783
            GCSICL  ++  + I L+P CGHL+H KC+ +WL +H TCP CR
Sbjct:   98 GCSICLADYNPANVIRLMPKCGHLFHVKCIDKWLKVHPTCPVCR 141
[Close]
BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: A0A067ES83_CITSI (RING-type E3 ubiquitin transferase n=3 Tax=Citrus TaxID=2706 RepID=A0A067ES83_CITSI)

HSP 1 Score: 58.2 bits (139), Expect = 4.470e-7
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 1 
Query:  622 KERASQALLEEG----CSICLQGFSHTHPITLVP-CGHLYHAKCLRRWLVLHTTCPSCRA 786
            KE++S+  L  G    C++CL   S   P+ ++P C H +HA C+  WLVLH+TCP CRA
Sbjct:   30 KEKSSRGSLSLGISADCAVCLSKISSAEPLQVLPTCHHGFHAHCIDAWLVLHSTCPLCRA 89
[Close]
BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: UPI001C4AD9FB (NEP1-interacting protein 1-like n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4AD9FB)

HSP 1 Score: 59.7 bits (143), Expect = 6.460e-7
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 1 
Query:  652 EGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCR 783
            + CSICLQ F  T  +  +PCGHL+HA CL++WL    +CP CR
Sbjct:  133 DSCSICLQDFGTTTRVLAMPCGHLFHAACLKKWLERSCSCPLCR 176
[Close]
BLAST of jgi.p|Trimin1|6986 vs. uniprot
Match: UPI001B88B470 (RING finger protein 24-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B470)

HSP 1 Score: 57.8 bits (138), Expect = 7.220e-7
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 1 
Query:  652 EGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCRAD 789
            + C++CL+ F     IT+ PC H +H KCL  WL  H TCP C++D
Sbjct:   55 DNCAVCLEEFQPKETITICPCKHGFHKKCLSEWLKQHNTCPMCKSD 100
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|6986 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMJ2_9STRA2.640e-184100.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CNW5_9STRA2.800e-3640.52RING-type domain-containing protein n=1 Tax=Tribon... [more]
S8CQ10_9LAMI2.090e-842.86RING-type domain-containing protein (Fragment) n=1... [more]
A0A8J5C0G5_ZINOF3.670e-854.55RING-type domain-containing protein n=1 Tax=Zingib... [more]
A0A2I0W5V0_9ASPA2.110e-739.47RING-type E3 ubiquitin transferase n=3 Tax=Dendrob... [more]
W6KXH6_9TRYP3.550e-746.00RING-type domain-containing protein n=1 Tax=Phytom... [more]
A0A103YIF9_CYNCS3.620e-754.55RING-type domain-containing protein n=1 Tax=Cynara... [more]
A0A067ES83_CITSI4.470e-745.00RING-type E3 ubiquitin transferase n=3 Tax=Citrus ... [more]
UPI001C4AD9FB6.460e-752.27NEP1-interacting protein 1-like n=1 Tax=Zingiber o... [more]
UPI001B88B4707.220e-745.65RING finger protein 24-like n=1 Tax=Gigantopelta a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_11contigContig_11:447260..451665 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|6986|CE6985_50
BRITEko00000,ko01000,ko04121
KEGG koko:K22378
EC2.3.2.27
GOsGO:0001664,GO:0003674,GO:0003824,GO:0004842,GO:0005102,GO:0005109,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0008150,GO:0008152,GO:0008283,GO:0009056,GO:0009057,GO:0009966,GO:0009968,GO:0009987,GO:0010498,GO:0010646,GO:0010648,GO:0016020,GO:0016021,GO:0016055,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0022603,GO:0023051,GO:0023052,GO:0023057,GO:0030111,GO:0030163,GO:0030178,GO:0031224,GO:0031226,GO:0032446,GO:0032801,GO:0035567,GO:0036211,GO:0038018,GO:0043112,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051603,GO:0051716,GO:0060070,GO:0060071,GO:0060828,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0071944,GO:0072089,GO:0090090,GO:0090175,GO:0140096,GO:0198738,GO:1901564,GO:1901565,GO:1901575,GO:1905114,GO:1905330,GO:2000026,GO:2000027,GO:2000050,GO:2000051
Descriptionubiquitin-protein transferase activity
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0800@1|root,KOG0800@2759|Eukaryota
Evalue8.04e-09
Seed ortholog2880.D8LS07
Hectar predicted targeting categorysignal peptide
TranscriptId7308
TrackFilteredModels1
ProteinId6986
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|6986gene_4742Tribonema minus UTEX_B_3156 geneContig_11 447260..451665 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|6986Trimin1|6986|CE6985_50Tribonema minus UTEX_B_3156 polypeptideContig_11 447446..451595 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4742_1exon_4742_1Tribonema minus UTEX_B_3156 exonContig_11 447260..447505 +
exon_4742_2exon_4742_2Tribonema minus UTEX_B_3156 exonContig_11 447740..447846 +
exon_4742_3exon_4742_3Tribonema minus UTEX_B_3156 exonContig_11 448734..448998 +
exon_4742_4exon_4742_4Tribonema minus UTEX_B_3156 exonContig_11 450580..450775 +
exon_4742_5exon_4742_5Tribonema minus UTEX_B_3156 exonContig_11 451306..451665 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_4742UTR5_4742Tribonema minus UTEX_B_3156 five_prime_UTRContig_11 447260..447445 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4742CDS_4742Tribonema minus UTEX_B_3156 CDSContig_11 447446..447505 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4742UTR3_4742Tribonema minus UTEX_B_3156 three_prime_UTRContig_11 451596..451665 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4742 ID=mRNA_4742|Name=jgi.p|Trimin1|6986|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1174bp|location=Sequence derived from alignment at Contig_11:447260..451665+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCCCCCGCTGTGTGACGCGACAGCGGCATACAGGTGACGCTGCAGCGAGA
CACGCCTGCCTGGCTGCGCCTGCGTGAGGTAGCGCAGCAGCAGCGGGAAA
GACCGCCCTCACGAAAAAAGTCCCTCGAGCGTGTGCATTGACATCAAATA
CGAAAGCGTGCGTGGTGGCTGGCCGCGGGGAGCAGGATGGCCTGCAACCC
CTTCTTCGCGATGCTTCCCATTGGGTTCTTTATCGTCTTCATCTGGGGGC
GTTTAGGGGGATTGTGGGGAGCTATTCACGAGATAAGCAGGCCGCAGCCG
CGAAGCATTGACGACTCATCACGGCGCAAGTATGCGGTGCGGCGACCTGG
CAGGGAAAAGTTTGTAAACTTCTGGGTGGTGCGGCTGCGCCAGGGCGGCG
ATTCCCCCCCGCCTGAACCTCCCAGCGGGGGGCTGTGGAATTCGGCCTTC
AACTCGCTCTGGGGGACGAGCCAAAATGGGGGGGGGTTGAGCGCTGCCTC
AGGATCAGGGTCATCAGTGCTCGGCACGGGGGCGGCGGCGGCGCCGGTCG
CGAGCCCGCCGCGGCCGCCGCAGTTTGAGGTCAAGCTGTGCATAACGCAG
GGCGTCACGATCGACGAGGTGAAGGAGCGCGCGTCGCAGGCGCTCCTGGA
GGAGGGCTGCTCCATCTGCCTGCAGGGCTTCAGCCACACGCACCCCATCA
CGCTCGTCCCCTGCGGCCACCTGTACCACGCCAAGTGCCTGCGGCGCTGG
CTCGTGCTGCACACGACGTGCCCGAGCTGCCGCGCGGACTTCAACGCGGA
CTTTGACGACGACGGCAACGCCGTGGACGCAGAAGGCGGCGGCGGCGGCG
TGGTGGACGGCGACGCGCTGAGCGCTGATGTGGAGTCGGGCATCATCGCT
CAGCAGCCTGGAGCGTCAACCGCGGCGCGGAGTGCTGACGTGGAGCTCGG
CGTCATTGCTCAGCAGCCTGGAGCGTCAACCGCGGCTGGAGCGTCAACCG
CGGCGCGGAGCGCTGACGTGGAACTGGGCGTCATTGCTCAGCAGCCGAGG
GCGGCGTCCGTGCGCGAGGCGCCGCCGCTGGTGGCTCCCATACGGTCCAT
ATAGGAGACATGTACTACTAGTAGTCGCTGCGCTGCGCCGGCGCAGCAGC
GGATCAGAGGGGCAGAATGGGGCG
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protein sequence of jgi.p|Trimin1|6986

>Trimin1|6986|CE6985_50 ID=Trimin1|6986|CE6985_50|Name=jgi.p|Trimin1|6986|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=306bp
MACNPFFAMLPIGFFIVFIWGRLGGLWGAIHEISRPQPRSIDDSSRRKYA
VRRPGREKFVNFWVVRLRQGGDSPPPEPPSGGLWNSAFNSLWGTSQNGGG
LSAASGSGSSVLGTGAAAAPVASPPRPPQFEVKLCITQGVTIDEVKERAS
QALLEEGCSICLQGFSHTHPITLVPCGHLYHAKCLRRWLVLHTTCPSCRA
DFNADFDDDGNAVDAEGGGGGVVDGDALSADVESGIIAQQPGASTAARSA
DVELGVIAQQPGASTAAGASTAARSADVELGVIAQQPRAASVREAPPLVA
PIRSI*
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mRNA from alignment at Contig_11:447260..451665+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4742 ID=mRNA_4742|Name=jgi.p|Trimin1|6986|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4406bp|location=Sequence derived from alignment at Contig_11:447260..451665+ (Tribonema minus UTEX_B_3156 )
GCCCCCGCTGTGTGACGCGACAGCGGCATACAGGTGACGCTGCAGCGAGA
CACGCCTGCCTGGCTGCGCCTGCGTGAGGTAGCGCAGCAGCAGCGGGAAA
GACCGCCCTCACGAAAAAAGTCCCTCGAGCGTGTGCATTGACATCAAATA
CGAAAGCGTGCGTGGTGGCTGGCCGCGGGGAGCAGGATGGCCTGCAACCC
CTTCTTCGCGATGCTTCCCATTGGGTTCTTTATCGTCTTCATCTGGGTAA
GCAGCGCGCAGCGTGTGCTCATGTTGCACTCAATGCATTCTCTGCTTGTA
GATCTCGGCCTGACGGAGAGCACGCTGTGTGTACCTGTGTGACACTTGCT
GCAGGCTACCACAGCCTTTTCTGCTCTGACTTACAGGTTTCTCAAGCGCG
TTTGTCACTTCAAGCCCGCTCACTAAACATAAGAGCCTCTAGCCTCACCA
TCTTCCTCTTTTGCTTTCGATTCGCCGCAGGGGCGTTTAGGGGGATTGTG
GGGAGCTATTCACGAGATAAGCAGGCCGCAGCCGCGAAGCATTGACGACT
CATCACGGCGCAAGTATGCGGTGCGGCGACCTGGCAGGCGAGTTAGTGCG
ACAGAACACACGTTTCTAAAGGATCTACTGTGCCGAGAGATGTCAGTCAG
TCGCTGTCTTGACCACGCATATCACTCATCGGCTGAGGCAAACTGCACGC
AAATGCTCGCACACATATGCACTGCAGTCAGCCTTAGATATGCAGGTCAA
CTCATATTTTGCTTGTCTACAGTTCTGGCAAATGCAAGTGACAGCATACT
TCCTGTCAGATTCCCACAATTCGCCGCACTTTACTGCCCCCGACACTGAC
CTGTTATTATATGGCTTTTCTGAACAAGCATTGTGACAGGCACATTGATA
TTCATTCTCAGCTTTCGCACTGTGAAGATTTCATCAACTATGACTGCTAC
ATGCAATACATGGTTTCACGACTGCATGCGAGTTGAAGTGCAGTTCTGCG
GTGTCTCCCGGAAGCTGCCGGATGCACGGTCGGCGGCGAAAATATGCCTA
CTCATTTATACTGGATTTATTGCATCAACTGCTGCGCAGCCATAATAATC
ATACTGCTCACGAAAATAAATATTTAGTCCAATCATTTGAGCTTGCTGTT
GCTGTTGCTATAAATGCAGTTTGAGCTTCAACAATGTTTCGCCAGATCGG
TCATACGATGCCAGATATGTCGAGCTTCATCGCAGGCGTTCAAGCATGCC
TGCTGGCTGCAGACAGTCTATTGAAGCTCCCCGCCTGCACGGGGAGCAAT
GATTAAGCTGCTTTTGTTTTCTGGAAGACGACAACCACACGACATGTGTC
TGATTGGCTCTCCACGCTATGTACTGACATGCTCAACCTCACATCTGGGC
ATGAGTTTGCACCGAGCCAATTGTCTCAACTGCTGCAAACGCCCCCCCCC
CCCCCGCCCGTGCTTATTCTCCAGGGAAAAGTTTGTAAACTTCTGGGTGG
TGCGGCTGCGCCAGGGCGGCGATTCCCCCCCGCCTGAACCTCCCAGCGGG
GGGCTGTGGAATTCGGCCTTCAACTCGCTCTGGGGGACGAGCCAAAATGG
GGGGGGGTTGAGCGCTGCCTCAGGATCAGGGTCATCAGTGCTCGGCACGG
GGGCGGCGGCGGCGCCGGTCGCGAGCCCGCCGCGGCCGCCGCAGTTTGAG
GTCAAGCTGTGCATAACGCAGGGCGTCACGATCGACGAGGTGAGGCAGCA
TCACTTCAACTTGTGGTAGCATTACTTCAAGTGGCAGTTGATATATACTG
CTTCGATTTGTTTGTCTTCGGCACTTGGTGAGCACTTGAGCGCCGCGGCG
GGGGGCCCTCAGAACGGCCGCCGCCGCAGTTTGAGGTGAAGCTGTGCGTA
ATGCAGGGCGTCGCAATCGACGAGGCGCGTACAGAATGGCAGCATTGCTC
CGAGTGACACTAGCAGGTACAGCAGCTTTATTCTCCGGCGCTTGGCGAAC
GATTGAGCAGCGGGCCCCACAATATGGCTGCTGCAGTGTGAGGTGAAGCT
GTGCATGGCGCGCAGGGCGTCGCGACCGACGAGGTGGACACCGAGGCAGC
ATTGCTTCCGGTAGCGCGTGCTGTCAGCGTAAGCGTCCTTCTCTGGCACC
TGGTGAATGGTGCGGAGCACTGCGGCGGAGCTCCAGTACGGCAGCCTTAG
CTTGAGGTCACGCTGTGCACAGCGCAGGGCGCCACAATCGACGAGGTGAG
TACATACCTCGAGTGATACTAGCAGTGCTGTAGCATGTGGTGAACGGTCG
AGCAGCGGGGCCCGCAGTTCGGCTGCCGCAGTTGGAGGTGAAGCTGTGCG
CAATGCAGGGCGTCACGATCGACGGGGTGAGGCAGCATCACTTAGCGTCA
CTTCAAGTAACTGTTGAATAGTGCATTGTTTGTCTTCGGCACTTGGTGAA
CAATTGAGCACTGCGGCAGGGCCCACAATTTGGCTACCGCAGTTTGAGGT
GAAGCTGTTCACAATGCAGTGCGTCACGGGCAATGAGGCAAGTACAGAAT
GGCAGCATTGCTCCGAGTGACACTTGTAGTATCATTACTTCAAGTGATGA
TTGTAGTAATGTAGCGTTTTTATCCAGCATTTTGTAAACGGTGGGGCACC
GCGGCGGGGCCGGATACGGCCGCTACAGTTGAAGTACAGCTGAAGTTGCA
CTCATGCGGGGCGCCACGATCGACAAAAGGCGAGCGACAGCCTACGTGAA
GTGGTGAATCCAGCTGTGACTGACGCATGCCTGAAGCAGCACTTGAAGCG
GCGCAGCCTTCCAGCGTTCGGCGACAGCACGAGCACAACACGCACGAGCA
CAACACGCACGAGCACAACTAGCGGCTGCTGCAGGTCACAGTGCTCAACA
GCCGCAGCCAACTCACCATACGTGCGCCCCTGCGCGCTCAACAGCTGCAG
ATTGCTCATCATACACCTGCCCGCCCCTGCGCGTGCGCGTATACCTACCT
ACCCGCCCACCAGGTGAAGGATCGCGCGTCGCAGGCGCCCCTGGAGGAGG
GCTGCTCACGGCACATCCTGATTGCCGAGTACGCCCCACATACGCAGTAC
TTGAGTGGCCACATGCGTTTTCGTGCAGCCCCGCTCAACAGCCGCAGCTA
ACTCATGATATACCTGCCCCCCTGCTCACGACGCATCCTGATTGCCAAAT
ACGCCCCAAATACGCAGCATTTACGTGGCCACATGCGTTTTCGTGCAACC
CCCTTCAACAGCCGGAGCTAACTCATAATAACCTGCCCCCCCCTGCGCTC
GCGCGTATACCTACCCACAGGTGAAGGAGCGCGCGTCGCAGGCGCTCCTG
GAGGAGGGCTGCTCCATCTGCCTGCAGGGCTTCAGCCACACGCACCCCAT
CACGCTCGTCCCCTGCGGCCACCTGTACCACGCCAAGTGCCTGCGGCGCT
GGCTCGTGCTGCACACGACGTGCCCGAGCTGCCGCGCGGACTTCAACGCG
GACTTTGACGACGACGGTGAGCGTCACCTGTTGAAGTTGGGAGGCGGCAT
GCAAAAGCGACTCGTTTGCGTTTCGTTGTTTTTGTGCACCATTCCTCAGT
TGCGTGGACCGGGTCGCGACATCAGCCGGTACAACCTCGCGCTGGAATTA
CGCCTGTGCGCGTGCACCCCATTTCTGCTGGCGTGCATGATGGGTTTCTG
AGTTTCTGGTCAAATGCGCATGCGTGTGATCATGTGATGCTCAGAGACAT
GCGGTCGTGGTGACTGCAGTGGCGGAAGGCGTGATGGCGGCGCAGACTGC
ACCCCAATCTGCTGAAGCGTCGTTCGTCGCCATCATTTCAGCCGTGCAGG
CTCGACGCCAGATCAGATCGCTACATCCAAGAAACTGCTTGCTTGATGTC
ACGTGCACATACACCTCAGCGTTCACATGCGCGCCGCTGCGCTGCAAGTT
GCGGCACAGCATCCGAAACTGCTATTCACTTGTAACTGCCAATTGCTGTC
CGCTGACACCCCCCCCCCCCCCCCCCCCGCCCGCCCCCCTTTACAGGCAA
CGCCGTGGACGCAGAAGGCGGCGGCGGCGGCGTGGTGGACGGCGACGCGC
TGAGCGCTGATGTGGAGTCGGGCATCATCGCTCAGCAGCCTGGAGCGTCA
ACCGCGGCGCGGAGTGCTGACGTGGAGCTCGGCGTCATTGCTCAGCAGCC
TGGAGCGTCAACCGCGGCTGGAGCGTCAACCGCGGCGCGGAGCGCTGACG
TGGAACTGGGCGTCATTGCTCAGCAGCCGAGGGCGGCGTCCGTGCGCGAG
GCGCCGCCGCTGGTGGCTCCCATACGGTCCATATAGGAGACATGTACTAC
TAGTAGTCGCTGCGCTGCGCCGGCGCAGCAGCGGATCAGAGGGGCAGAAT
GGGGCG
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Coding sequence (CDS) from alignment at Contig_11:447260..451665+

>mRNA_4742 ID=mRNA_4742|Name=jgi.p|Trimin1|6986|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=918bp|location=Sequence derived from alignment at Contig_11:447260..451665+ (Tribonema minus UTEX_B_3156 )
ATGGCCTGCAACCCCTTCTTCGCGATGCTTCCCATTGGGTTCTTTATCGT
CTTCATCTGGGGGCGTTTAGGGGGATTGTGGGGAGCTATTCACGAGATAA
GCAGGCCGCAGCCGCGAAGCATTGACGACTCATCACGGCGCAAGTATGCG
GTGCGGCGACCTGGCAGGGAAAAGTTTGTAAACTTCTGGGTGGTGCGGCT
GCGCCAGGGCGGCGATTCCCCCCCGCCTGAACCTCCCAGCGGGGGGCTGT
GGAATTCGGCCTTCAACTCGCTCTGGGGGACGAGCCAAAATGGGGGGGGG
TTGAGCGCTGCCTCAGGATCAGGGTCATCAGTGCTCGGCACGGGGGCGGC
GGCGGCGCCGGTCGCGAGCCCGCCGCGGCCGCCGCAGTTTGAGGTCAAGC
TGTGCATAACGCAGGGCGTCACGATCGACGAGGTGAAGGAGCGCGCGTCG
CAGGCGCTCCTGGAGGAGGGCTGCTCCATCTGCCTGCAGGGCTTCAGCCA
CACGCACCCCATCACGCTCGTCCCCTGCGGCCACCTGTACCACGCCAAGT
GCCTGCGGCGCTGGCTCGTGCTGCACACGACGTGCCCGAGCTGCCGCGCG
GACTTCAACGCGGACTTTGACGACGACGGCAACGCCGTGGACGCAGAAGG
CGGCGGCGGCGGCGTGGTGGACGGCGACGCGCTGAGCGCTGATGTGGAGT
CGGGCATCATCGCTCAGCAGCCTGGAGCGTCAACCGCGGCGCGGAGTGCT
GACGTGGAGCTCGGCGTCATTGCTCAGCAGCCTGGAGCGTCAACCGCGGC
TGGAGCGTCAACCGCGGCGCGGAGCGCTGACGTGGAACTGGGCGTCATTG
CTCAGCAGCCGAGGGCGGCGTCCGTGCGCGAGGCGCCGCCGCTGGTGGCT
CCCATACGGTCCATATAG
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