Trimin1|349226|estExt_Genemark1.C_Ctg_390052 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349226
Unique NameTrimin1|349226|estExt_Genemark1.C_Ctg_390052
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length215
Homology
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: A0A835Z1Y4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y4_9STRA)

HSP 1 Score: 399 bits (1024), Expect = 5.280e-140
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query:    1 MGVGGGGGPLDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIMELLPWRQSRMAPAKGESPVTANTEQLTQPAAATREARTSRGRKGTRRRRVTLVTVRSRASVRAAARGATVAAQSR 214
            MGVGGGGGPLDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIMELLPWRQSRMAPAKGESPVTANTEQLTQPAAATREARTSRGRKGTRRRRVTLVTVRSRASVRAAARGATVAAQSR
Sbjct:    1 MGVGGGGGPLDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIMELLPWRQSRMAPAKGESPVTANTEQLTQPAAATREARTSRGRKGTRRRRVTLVTVRSRASVRAAARGATVAAQSR 214          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: D7G8A3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A3_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.550e-30
Identity = 55/131 (41.98%), Postives = 89/131 (67.94%), Query Frame = 0
Query:   10 LDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIME 140
            L  ++  FED+G+T ++ P    +HE L+VAFLA TWA+CYQ QP+Q  + AP+ + I+ S N +++  R+ F  +++ +E +++    L+ +G D+ R+  +LAEST+FRK  KP+TIPGKLW T K+ +
Sbjct:    2 LARIKEYFEDRGVTASNLPKVIVVHECLSVAFLALTWAVCYQIQPTQGPVLAPINKTIQNSNNAFIVRSRQSFEALISKSEKRLS-QDWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWLTLKLSQ 131          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: A0A7S0WNF0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WNF0_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 3.910e-18
Identity = 47/130 (36.15%), Postives = 74/130 (56.92%), Query Frame = 0
Query:   10 LDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSEN-RWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKI 138
            +  ++  F +QG+T AD P A  +HE++++ F A+TW + YQTQP ++     LA A+   +  ++++   +   G       K +   R+S    D  RLT + AES  FR  IKP+T+PGKLWA WK+
Sbjct:    1 MGKIKDYFVEQGLTVADIPKAIVLHEVVSIGFAAATWMVAYQTQPGKT-----LAMAVPADKRPKFLVNGYKAAMGAAKKQVEKTSFLKRIS----DPERLTVSCAESICFRGIIKPVTVPGKLWAAWKL 121          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: A0A7S0IM15_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IM15_MICPS)

HSP 1 Score: 78.6 bits (192), Expect = 1.080e-14
Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = 0
Query:   10 LDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSS----QGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIME 140
            +  ++  F +QG+ P D P AF  HE+++VAF ASTW  CY  QPS + +  PLA+    ++          F   +A ++AK+     L      +     RLT +LAES +FR +IKPIT  GKL+ ++K ++
Sbjct:    1 MGRIKDYFVEQGLGPKDIPVAFVFHEVISVAFAASTWVACYGIQPSAT-ICRPLAKLPIAAK------AAGAFEKALAFSDAKVGKMTWLKKVPIVKNAAPRRLTVSLAESLMFRGAIKPITFGGKLYLSYKFVQ 128          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: A0A7S3XSQ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSQ9_HETAK)

HSP 1 Score: 79.3 bits (194), Expect = 6.050e-14
Identity = 46/165 (27.88%), Postives = 81/165 (49.09%), Query Frame = 0
Query:   10 LDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEA-----------------------------------KIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIM 139
            ++ ++  F ++G   ++ P A A++E+L ++FL STW+ICYQ QP QSA+     + ++++E      +  G+   V SA++                                   KI  S  +     +T +L  +  +S++FRK+ KP+TIP K+W TWKI+
Sbjct:   27 INDIKKYFGEKGFEASEIPKAIAVYEILGLSFLVSTWSICYQLQPHQSAVLKSCRQFLQSNEQALPKFLSTGYQNAVHSADSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIPGKI--SEIIGGGFLNTEKLVASYIQSSVFRKACKPVTIPAKIWLTWKIL 189          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: A4S087_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S087_OSTLU)

HSP 1 Score: 75.1 bits (183), Expect = 1.770e-13
Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 0
Query:   10 LDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIM 139
            +   R  F D+G+TP D   AF  HE+++VAF ASTW   Y  +PS++ L  PLA+  + +E    +  R+  A             P L  +  +  RLT +LAES  FR  IKPIT  GKLW +++ +
Sbjct:    1 MGRAREYFVDKGLTPTDVVPAFVFHEVISVAFAASTWIAAYAIEPSRTVL-KPLAKT-KVAEKAAPL-FRKTLAAAAKQTAKATTRVPAL--RAANAERLTLSLAESLFFRGCIKPITFGGKLWLSYQFI 125          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: C1DY48_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DY48_MICCC)

HSP 1 Score: 78.6 bits (192), Expect = 2.570e-13
Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = 0
Query:   10 LDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSS----QGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIME 140
            +  ++  F +QG+ P D P AF  HE+++VAF ASTW  CY  QPS + +  PLA+    ++          F   +A ++AK+     L      +     RLT +LAES +FR +IKPIT  GKL+ ++K ++
Sbjct:    1 MGRIKDYFVEQGLGPKDIPVAFVFHEVISVAFAASTWVACYGIQPSAT-ICRPLAKLPIAAK------AAGAFEKALAFSDAKVGKMTWLKKVPIVKNAAPRRLTVSLAESLMFRGAIKPITFGGKLYLSYKFVQ 128          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: A0A7S0GV26_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GV26_MICPS)

HSP 1 Score: 74.7 bits (182), Expect = 4.520e-13
Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = 0
Query:    8 GPLDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIA-------------ASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIM 139
            G +  ++  F DQG+T AD P A   HE+++V F A TW+ CY  QPS + +  P+A     S+      V   F   +A ++ K+A             A+PR         RLT +LAES +FR SIKPIT   KL+ ++K +
Sbjct:   38 GSVSRVKEYFTDQGLTAADLPAALIFHEVISVGFAAFTWSACYGIQPSVT-IARPMAGLPGASK------VAGAFDRALAFSDKKVANMKWLKKVPVVKHAAPR---------RLTVSLAESLVFRGSIKPITFGAKLYLSYKFV 166          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: A0A090M7Q6_OSTTA (Unnamed product n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M7Q6_OSTTA)

HSP 1 Score: 73.9 bits (180), Expect = 6.240e-13
Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = 0
Query:   10 LDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVAS-----AEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIMELL 142
            +  ++  F D+G+ P D   AF  HE +++AF ASTW   Y  +P+++ L     R +R ++    M    G A  +A+     A  +I A  R S++     RLT +LAES +FR SIKPIT  GKLW +++ ++ L
Sbjct:    1 MGRVKRYFIDRGLGPEDLIPAFVFHETISIAFAASTWIAAYAIEPTRTVL-----RPLRGTKAAKAMAKPFGAALELATKQTAKAVTRIPALKRASAE-----RLTVSLAESLMFRGSIKPITFGGKLWLSYEFVKWL 128          
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Match: A0A4Q6D0M9_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6D0M9_9PROT)

HSP 1 Score: 68.6 bits (166), Expect = 4.610e-11
Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = 0
Query:   15 GVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFA-PLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIMELL 142
            G  +D+G  P+D P A  IHELL +  LA TW++CY    SQS +F  PLA                     V S++   A +  L +  + ++ +  +  ES+  RK I+P+T+PGK++ T+K++ELL
Sbjct:   14 GKLKDKGFGPSDIPKAIFIHELLGMFMLALTWSLCYFYPLSQSPMFVKPLA---------------------VISSKMPAALAKSLEANKFLSSPIGVSYVESSCLRKLIRPLTLPGKVFLTFKLVELL 121          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349226 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835Z1Y4_9STRA5.280e-140100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G8A3_ECTSI2.550e-3041.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0WNF0_9CHLO3.910e-1836.15Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S0IM15_MICPS1.080e-1435.56Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S3XSQ9_HETAK6.050e-1427.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A4S087_OSTLU1.770e-1336.92Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
C1DY48_MICCC2.570e-1335.56Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A7S0GV26_MICPS4.520e-1335.17Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A090M7Q6_OSTTA6.240e-1335.51Unnamed product n=2 Tax=Ostreococcus tauri TaxID=7... [more]
A0A4Q6D0M9_9PROT4.610e-1134.11Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_39contigContig_39:399925..401914 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349226mRNA_9210Tribonema minus UTEX_B_3156 mRNAContig_39 399891..403284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349226|estExt_Genemark1.C_Ctg_390052 ID=Trimin1|349226|estExt_Genemark1.C_Ctg_390052|Name=jgi.p|Trimin1|349226|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=215bp
MGVGGGGGPLDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICY
QTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLS
SQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIMELLPWRQSRMA
PAKGESPVTANTEQLTQPAAATREARTSRGRKGTRRRRVTLVTVRSRASV
RAAARGATVAAQSR*
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