mRNA_7837 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349141
Unique NamemRNA_7837
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A835YVZ2_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ2_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.210e-89
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 
Query:    1 MSKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLHEFTAFLYS 510
            MSKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLHEFTAFLYS
Sbjct:    1 MSKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLHEFTAFLYS 170
[Close]
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A835YVF8_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF8_9STRA)

HSP 1 Score: 185 bits (469), Expect = 8.710e-56
Identity = 107/182 (58.79%), Postives = 112/182 (61.54%), Query Frame = 1 
Query:   16 KALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLR-----------------AIDLHEFTAFLYS 510
            +AL+ EEVEDYEEAFKNFDK GNGEIDLKELGIVMRSLGYSPTDKQLRDML+Q         TFNEFVEMMRRCELSTDFE+EIKGAFE                                    FFDKDG GDI  EELAS+MRGLGANL                  AI LHEFT FLYS
Sbjct:    6 RALTKEEVEDYEEAFKNFDKDGNGEIDLKELGIVMRSLGYSPTDKQLRDMLKQAXXXXXXXXTFNEFVEMMRRCELSTDFEMEIKGAFE------------------------------------FFDKDGDGDITSEELASVMRGLGANLSDQEIALLVKEADKNGDGAISLHEFTTFLYS 151
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BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A835YUT0_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT0_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.330e-36
Identity = 76/152 (50.00%), Postives = 92/152 (60.53%), Query Frame = 1 
Query:   13 MKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANL 468
            M+  + EE+EDY EAF NFDK  +GEID  ELG VMRSLGY+PTD+QL DM+ +VD DGNG I+F+EFV MMR+CE+ TDF+ EI  AF+                                     FDKDGSG I  EEL +IM+GLGANL
Sbjct:    9 MREATEEELEDYREAFNNFDKDQSGEIDEYELGTVMRSLGYNPTDEQLHDMMLKVDIDGNGSISFDEFVIMMRKCEVETDFDREITEAFKV------------------------------------FDKDGSGSIDKEELTAIMKGLGANL 124
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BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: D8LJU6_ECTSI (Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU6_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.450e-35
Identity = 80/186 (43.01%), Postives = 101/186 (54.30%), Query Frame = 1 
Query:    4 SKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLR-----------------AIDLHEFTAFLYS 510
            +K  K LS EE+EDY+EAF NFDK GNG ID  ELG+VMRSLGYSPT++QL++M+ +VD D +G I+F+EFV MM+  E+ TDF  EI  AF+                                    FFDKDG G++ P ELA IMRGLG  L                   I + EF +F+YS
Sbjct:    5 AKTTKELSEEEIEDYKEAFSNFDKDGNGNIDELELGVVMRSLGYSPTNQQLKEMMAKVDTDQSGGISFDEFVAMMQLGEVETDFTKEINEAFK------------------------------------FFDKDGDGEVTPAELAEIMRGLGDKLSDDEIELLVKVAXXXXXXVISIDEFISFMYS 154
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BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: D8LH46_ECTSI (Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH46_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.860e-33
Identity = 77/183 (42.08%), Postives = 100/183 (54.64%), Query Frame = 1 
Query:   13 MKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLR-----------------AIDLHEFTAFLYS 510
            +K L+ EEVED +E F+ FDK G+GEIDL EL  VM SLGYSPT+KQL DM+ +VD DGNG+I F EFV MMR+C++ TDF+ +I+ AF+                                    FFD+DGSG I  +EL +IMR LGA L                   +D++EF   +YS
Sbjct:    9 IKDLTGEEVEDLKETFRTFDKDGSGEIDLDELRTVMTSLGYSPTNKQLEDMMAKVDLDGNGLINFAEFVTMMRKCKVDTDFDRQIREAFK------------------------------------FFDQDGSGAIDTKELGNIMRQLGAKLTDSEINLLVQEADVDGDGQVDINEFLKIMYS 155
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BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A6H5JMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF0_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 6.840e-32
Identity = 71/151 (47.02%), Postives = 89/151 (58.94%), Query Frame = 1 
Query:   16 KALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANL 468
            K LS EE+EDY+EAF NFDK  +G ID  ELG+VMRSLGYSPT++QL++++ +VD DGNG I+F EFV MM+  E+ TDF+ EI  AF+                                    FFDKDG G++   ELA IMRGLG  L
Sbjct:   72 KELSEEEIEDYKEAFSNFDKDCSGNIDESELGVVMRSLGYSPTNEQLKEIMAKVDTDGNGGISFEEFVAMMQLGEVETDFKKEINEAFK------------------------------------FFDKDGDGEVTRAELAEIMRGLGDTL 186
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BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A835Z1Q3_9STRA (Calmodulin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.850e-28
Identity = 73/177 (41.24%), Postives = 92/177 (51.98%), Query Frame = 1 
Query:    4 SKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANL---------RAIDLHEFTAFLY 507
            S EM+ L+ EE++DY+EAF NFDK GNGEID  EL  VMRSLGY+PTD+QL DM+  +D DGN      EFV MMR+CE+ TDF+ E++ AF+                                     FD+DGSG I   EL  IM+     L          AI+L EF   +Y
Sbjct:    7 SSEMRELTQEELDDYKEAFDNFDKDGNGEIDEIELSTVMRSLGYNPTDEQLHDMMLNIDLDGN------EFVTMMRKCEVETDFDREVREAFQV------------------------------------FDRDGSGAIDKAELTVIMKAKIELLVREADVDGDGAINLDEFIRIMY 141
[Close]
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: D7G0X3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0X3_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.010e-24
Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 1 
Query:   13 MKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLH 486
            ++ LS E+V D +EAF NFD+ G+G ID  EL  V+RSLGYSPT  QL+ ++ +VD DG G I+F EFV +MR   + TD+E EI GAF                                     FFDK+G G +  +ELA I R LG +L   +++
Sbjct:   12 IRGLSEEDVADLKEAFDNFDRNGDGTIDSVELATVLRSLGYSPTKDQLKKLMDKVDLDGTGDISFEEFVVLMRVGGMETDYEKEINGAFS------------------------------------FFDKNGDGQVDRQELAEIARALGDSLTDAEIY 133
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BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A210PL44_MIZYE (Calmodulin n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PL44_MIZYE)

HSP 1 Score: 102 bits (254), Expect = 1.400e-23
Identity = 61/162 (37.65%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:   13 MKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLHEFTA 498
            M+ LS+++V +++EAF  FDK G+G++  KELG VM+SLG +PT+K+L DM+ +VD DGNG I F EF+ MMR      D + E+  +F+                                     FDKDG G I  EEL S+M  LG NL   +L    A
Sbjct:    1 MEDLSSDQVAEFKEAFDLFDKDGDGKVSAKELGTVMKSLGQNPTEKELVDMINEVDSDGNGTIEFEEFLNMMRVKMNCVDHQDELHQSFKV------------------------------------FDKDGDGSITKEELRSVMTTLGENLTDAELDSMMA 126
[Close]
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A6V7TMR3_9BILA (Hypothetical protein n=3 Tax=Meloidogyne TaxID=189290 RepID=A0A6V7TMR3_9BILA)

HSP 1 Score: 102 bits (254), Expect = 4.520e-23
Identity = 57/160 (35.62%), Postives = 90/160 (56.25%), Query Frame = 1 
Query:   10 EMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLHE 489
            +++ L+ ++V +++EAF+ FDK G+G +   ELGIVM+SLG+SPTD++L++M++++DEDGNG I  NEFV+MM R    ++ E E++ AF+                                     FDKD  G I P EL  +M+ LG +L   ++ E
Sbjct:   31 QIEGLTEDQVAEFKEAFELFDKDGDGRVTAAELGIVMKSLGHSPTDQELQEMVREIDEDGNGSIELNEFVKMMSRKVKESESEKELREAFQV------------------------------------FDKDNDGFISPFELRFVMQNLGEDLTDFEVKE 154
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVZ2_9STRA1.210e-89100.00Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID... [more]
A0A835YVF8_9STRA8.710e-5658.79Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID... [more]
A0A835YUT0_9STRA5.330e-3650.00Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID... [more]
D8LJU6_ECTSI1.450e-3543.01Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosu... [more]
D8LH46_ECTSI1.860e-3342.08Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JMF0_9PHAE6.840e-3247.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1Q3_9STRA8.850e-2841.24Calmodulin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
D7G0X3_ECTSI1.010e-2439.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A210PL44_MIZYE1.400e-2337.65Calmodulin n=1 Tax=Mizuhopecten yessoensis TaxID=6... [more]
A0A6V7TMR3_9BILA4.520e-2335.63Hypothetical protein n=3 Tax=Meloidogyne TaxID=189... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_37contigContig_37:383092..389448 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349141|estExt_Genemark1.C_Ctg_370047
BRITEko00000,ko00001,ko01009,ko03036,ko04131,ko04147
KEGG Pathwayko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
KEGG koko:K02183
DescriptionCalcium-binding protein
COG categoryDTZ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5126@1|root,KOG0027@2759|Eukaryota
Evalue1.36e-37
Seed ortholog2880.D8LJU6
Hectar predicted targeting categoryother localisation
TranscriptId349463
TrackFilteredModels1
ProteinId349141
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349141gene_7837Tribonema minus UTEX_B_3156 geneContig_37 383092..389448 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349141Trimin1|349141|estExt_Genemark1.C_Ctg_370047Tribonema minus UTEX_B_3156 polypeptideContig_37 383363..389448 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7837_7exon_7837_7Tribonema minus UTEX_B_3156 exonContig_37 383092..383405 -
exon_7837_6exon_7837_6Tribonema minus UTEX_B_3156 exonContig_37 385133..385212 -
exon_7837_5exon_7837_5Tribonema minus UTEX_B_3156 exonContig_37 386122..386181 -
exon_7837_4exon_7837_4Tribonema minus UTEX_B_3156 exonContig_37 386261..386308 -
exon_7837_3exon_7837_3Tribonema minus UTEX_B_3156 exonContig_37 386407..386514 -
exon_7837_2exon_7837_2Tribonema minus UTEX_B_3156 exonContig_37 387294..387392 -
exon_7837_1exon_7837_1Tribonema minus UTEX_B_3156 exonContig_37 389374..389448 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_7837UTR3_7837Tribonema minus UTEX_B_3156 three_prime_UTRContig_37 383092..383362 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7837CDS_7837Tribonema minus UTEX_B_3156 CDSContig_37 389374..389448 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7837 ID=mRNA_7837|Name=jgi.p|Trimin1|349141|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=784bp|location=Sequence derived from alignment at Contig_37:383092..389448- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCAAGGAAATGAAGGCGCTGTCGACGGAGGAGGTGGAAGATTACGA
GGAGGCGTTTAAGAACTTTGACAAGGGTGGCAACGGGGAAATCGACCTGA
AGGAGCTGGGCATTGTGATGCGCTCACTGGGCTACTCACCAACAGACAAG
CAGCTCAGGGATATGCTTCAACAGGTCGATGAGGATGGAAATGGCGTGAT
CACGTTCAACGAGTTTGTGGAGATGATGCGGCGGTGTGAACTGTCCACGG
ACTTTGAGCTGGAGATCAAGGGCGCGTTTGAGTATGATATGTCCACGGAC
TTTGAGCTGGAGATCAAGGGCGCATTTGAGATGATGCTGCGGTGTGAACT
GTCTACAGACTTTGAGCTGGAGATCAAGGGCGCGTTTGAGTTCTTTGACA
AAGACGGCAGCGGTGATATCATACCAGAGGAGCTGGCATCCATCATGAGG
GGTCTCGGCGCAAACCTCAGGGCCATCGACCTACACGAGTTCACGGCCTT
CCTGTACTCCTAGTGTACTCGTGAAGTACCCATCTAGATGCCTACCTGCT
CCCGTTCCCTGCTGTCATCAACACACGAGCGCAAACAAGCAGAACCAGGC
ACTGCTGCCTGTTACACCAAGGTTTGAACCTACATAGGTGGTGTCAGTTT
GTGTGCTGGCAGCACCACCTGCTACGGGTTCAACACAGTGGTCGTGAAGC
GCCACCTGTGTTGTTTTTAAACATGTCCTTATTTATGAGGCACACGAGTG
CCGGTTGCGTTCCAAAACGCCCGCTTTGTTTCCA
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protein sequence of jgi.p|Trimin1|349141

>Trimin1|349141|estExt_Genemark1.C_Ctg_370047 ID=Trimin1|349141|estExt_Genemark1.C_Ctg_370047|Name=jgi.p|Trimin1|349141|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=171bp
MSKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDK
QLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMSTD
FELEIKGAFEMMLRCELSTDFELEIKGAFEFFDKDGSGDIIPEELASIMR
GLGANLRAIDLHEFTAFLYS*
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mRNA from alignment at Contig_37:383092..389448-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7837 ID=mRNA_7837|Name=jgi.p|Trimin1|349141|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6357bp|location=Sequence derived from alignment at Contig_37:383092..389448- (Tribonema minus UTEX_B_3156 )
ATGAGCAAGGAAATGAAGGCGCTGTCGACGGAGGAGGTGGAAGATTACGA
GGAGGCGTTTAAGAACTTTGACAAGGTACATTATTCTTTCACAAAATATT
TTTGCAATCGATAAGAATCCTGGGCAGCCCTGCCCTCATGCATCCCTCAG
CAGTCGAGCGCGATGTTGTTGTTCACCATTATAGCAATGGCGAAGCTTTT
GACGCTGGCGACTCCGCTCTCCAGCAGTCGTGGTTTCGGAGAACGACAGT
TCCAGTGTGCGTGCGGGAATGCAGCCTAACTTGCTTTTGATGCGCTTCGC
GGTCCACGCAAGTATCATCCAATATTAGTTTTGAGCAAGAGTCTGGTTGG
ACACGATGTTGTGCCGCCGGCAAGTGCCGCGCTGCAAAGCCCTCAATTTG
CGCGCCAGGGCGCGCCAAAACTGCTGTCCTGCCAGTGTGTGCACAATGTG
GTGCACAATGCTTTCTGCGCACCTATTGCGACGACATATCATTGCTTCGA
CCCTTGTGCTACTGCCTTCAGTCTGTTGATGTGATATTTCTGTTGCTGGT
TGCGTTCCGCGGTTAGTGGTGCCCGAGTAATGCCGTCTCCGCCGCCACTT
GCCATGTTGGCGCTTTCACGCAATTCACGCAGTACATGTACGGCATCACT
ATCGGAGCACTTCGTTCTTGGTGCCAGTAATGTGTTTCATTGCAATTGAC
ATTTCAAGCATTTTTGGATTTGCTGTCGAGACTCACATTCGACCAGCCGA
CTGTCCCACGATGACGTGAAATCAGCGGAGCGTTCGCTGGTTAGCCCTTG
GTCTACAAGGCAGATTTTCTTTCATCCAGTAGGGCATTGGCATCCGCAAA
TTTCATTGAGACTGCTGGCGGGTTGTTTGGCTGCAGTTATTGTTAAGCAG
TCACGAACATCACCTTTGTCGCAAATTGCACTATACAGTTGTAAAGCCCT
CTGCAACAACTGGCCGTGTGCATTGACCAGCGTGGCTGGTTGTGTAGACC
TGTCACTGCTGAACTGCCTGCAAGGTCTATGCTTATGGTGGAAAAGACCA
GACACGCGCATAGTTGAGCAAGCCTCGCAGCAGCACAGGTTACTTGTGCC
ATCGGCCCCACTGTTGAAGTATTCGTTGAAGGCTCATCGCGATAATAGCG
ATGGTGGGCAAACGACAGCCAAAAATACGTGTTGGCACGCGGTCCCGCTG
ATGGGGTGGCAATCCTTTGAGCAGCCTGCTGGTCAAGCACTGCTGCACAA
TTGCACTTCCAACTACCACGGCGTTGTACATGTCTGCAGAATGGTGCAGA
ACATTTCTGCACTAACACCTGATCCGCTTTATGAATTTCAGAAACCCTAA
CACTGGCAGCCACAGCTGCTCACCTCTCCTGTTTCGCTTCCAGCATACTG
GCACTGATACGCCGCAGTGGCAGTCACAAAACTGCAATATGGCTTAGGGC
AATGGCAGTCACAAAACTGCAATATGGCTTGGCGCTCGAGACACCAATTT
AAGTCAGATGAGAGGCGTTTTAGTGTTGTTGCATACCCAATGCTTGCCTG
CTCACCCAATCACACATGAACACATTGTCAAGTTCAACAAGCACATGAGT
TCTTTCAGAGTACATGTGTATGTGCGTGTCGCATCCCTTTCAAGTCTGCA
ACACCTGGCTGTTGAAGCCAGAAGACCTGCAACTGTCGTCTTGCTCTGTA
TATGTGTGTTTATCTGCCTGCTGAGCATGACGGCGGTGGAGCTGAAAGCC
CCTGGCACTGCTATTGACGTTACCATTATGTTCCCCCACACATGGCTTGG
CCACAAGTGCTGCTGTGGCTAACATGGACATGTTCAATGATGTGCTGGGT
GTGTTGATTATTGATGATGTTGGTATGTTGCTCGATTGTGCACATTACCA
TTATGTTTCCCACACACATGACATGACCACACCTGCTGCTGTGTTCAACA
TTGACAAATTCGCTCAACATTTGCTGAGTATCAATCGTCGATTAGCTCTT
TCGTTGATTAGCTCTGCTGCACCTTTCACTTTGTAACCGACTTTGTGACT
GCCCAGGGTGGCAACGGGGAAATCGACCTGAAGGAGCTGGGCATTGTGAT
GCGCTCACTGGGCTACTCACCAACAGACAAGCAGCTCAGGGATATGCTTC
AACAGGTGATGAAGTAGGGGTATGTTTTCAGCACAAAGAGGAGTGCGTGA
CCATGTGAACTGCACCACGACTAACACTTTTGGTTGTTATTCATGAAGCA
GCAGTTTGGATTTGGGGCTACTTGCGTGGATTAACAGCCTGAACAGGGTC
TGCTTTACCCGGCGCAGGCACTTGCAGCATTTCTACACAAACTACTGCAA
GTGTTCGACCAGTGAGTGTCGCGAACAGCAAGTGCACTATCACCAGGGGT
TGTTATCACGAGTCCACACCATCTGAACGACTCCGACTCCTCCCCGCGAA
GCTGTGACTCGTGCACTCACGACTCCGACTCCGCTCTGCAAAGCTGGCAC
CAGTCATTGGATGATTCCAGCTTTGACTCCGGGGAGCCATGTGACAGCCC
AAACGACTCCGAGTCCGGTCCATGGCAGCCTAACCCTAACCCTAACCCTA
ACCCTAAGTAGGGGTCAGCGACGACTCTGAGTGTGGAGTCGTGATTTGTG
CTCCCTGAATATACCTTACTTCATCACGTGACAACTTGCTAGTACAGGGA
CGAACGCCGCATTTTTCATTAACCCTAAACCCTAACCCTAACCCTAACCC
CAAGACAGACTGCAAAGTCGTACTTCTATAGGTTATTGAGGCTCAGACCA
GGTCAGGAGCGTTTTCCTGCACTCCGCTGTTTTTAACGCGTCAGGCTTGT
CGGAGCGTCACACACACGGACTTCAACCTCGCTATACACATTTGATGTTT
ATTCTCTCTCGCATTGGCCATGCATTCGCGCTAGGTCGATGAGGATGGAA
ATGGCGTGATCACGTTCAACGAGTTTGTGGAGATGATGCGGCGGTGTGAA
CTGTCCACGGACTTTGAGCTGGAGATCAAGGGCGCGTTTGAGGTCAGTTC
ACAGTCCATGAACAGTACAGTAAGTCCACAAACTGTACAGCCAATTCTCA
AACAGTACAGCCAGTCACAAATATGGAGATGATGCGGCAGTATGATATGT
CCACGGACTTTGAGCTGGAGATCAAGGGCGCATTTGAGGTCAGAACACAG
TCTATAAACAGTACAGCCAGTCTAAAAATTGTACAGTAAGTCCACAAACA
GTACAGCCAATCTGGAGATGATGCTGCGGTGTGAACTGTCTACAGACTTT
GAGCTGGAGATCAAGGGCGCGTTTGAGGTCAGTTCACAGTCCACCACGCA
GTACAGTCCACCTAGTGGTGTACAGTTGCACGGGTGCCACCTCGATACCT
GTACACGCTCATGCTTGCATTTGAGCTGAGTTCACAGTCCACCAAGCAAG
TACAGTCCACCTTGTGGTGTACAGTTGCACGGGTCCATCTCGATGCCTGT
ACATGCTCATGCTCGCATGCAAGTATAGTAATGAGTAGCGGAGGCGTATG
CAAAGTCAACTTGCCATGTACCTCAGCTTTGGTGAGTAGTCTGTGAGTGC
AGGATGGTGCATCTGACCAAGAATCTTGTGTCAGTTCACAGTGCACCAAA
CAGTACAGCCAGTTCACCAGACAGTGCAACCTTACTGTTTTACACTTCAC
GCCGGCTCACTGCTGAAAGATGTTGGTGTAGTTGCGTTTTTTTTTACTGA
CCCTGCTGTTGTACAAGACAAGCAGACTGAAGCATGCGTCGACTCTCAGC
GAGAACACAAGTGCACATGACTGATTTTCGCTCAGAAATAGTTTGCTGCT
GTGAGCACGAGTGCAGTGCTTTGAGGGCTAGCATTTGTTGCTGCGCACGA
ATGCAGCGTTCTTGAGGGCTTGTATTCTTGGCAATTTGTCATGCTGTGCT
TGGCGGATGGTTATCAATCCTCCCCTGCGTTCTTTGCAACCACCTCTAGC
TCTCATCTGATGCTGTGCCACTTCTTCGTGCGCTGGTGCAAGTGCTTTGA
CAGTGATGGTAGGTACAGTACCCGAATATAACTCAGAGTTAGCGAAAGGT
TAGGGTTCACTATTGGCAAACCAAACGTCCTTGAAATCGTTCGTGCTCTT
TCTGCACCATCATGCCCCATATGCACATACCATGTTCTTTAATCATCTTC
ACATCTAATGTTCGCACCTGGTACCCGTTGCTGCAGTTCTTTGACAAAGA
CGGCAGCGGTGATATCATACCAGAGGAGCTGGCATCCATCATGAGGGGTC
TCGGCGCAAACCTCAGGTAAACTTCAACTGCACATTTCAACTTCAATAGC
ACCATTACGTGTTTCATGTGCTCAATCCGCTGGTGGGGGTACGAGAACCT
CAGTATTTCATCAGAGGTGCAAATGTCGCTGATCTGACCTTGGTCACTCC
AAAGTGATACTGCAAGGGGTCACTTCAACTTCCAACTTCAATGCTCGTCT
GTAACTGTAATATCTGCCTCTCCCAGCCAAAGTAAAGGCTGACTCTTCTT
CAGATGTACAAATATCGCCGATCCGACCATGGGTGATTCCAAACTGTAGA
GGGTAACTAACTTGAACCTCAACACCTCTCTCAAGGATATGATGTGCTCC
TGCCATCACAAAGTTAAGGCTGTTGCTTGATGCCGAGAAATCCATGTGCC
ATGACAATGTAATTCAGCCCCTTTGTGCAGTCACATATGCAAGCAGGGCG
TGCAATGCCTCGACAGCCAGCAACAGGTGAAGAGCTCACAAAGATGGCCA
TTTCAAGCGTCAAGTCATGACGCTAAGCAATCGGCACAGGTGTCGCTGAA
CTTGGTAGAATTTTCAATTGAGCGTTGCCATCAATCAAGACTATGCTTTG
GTGTACTCCAAATAAAAACACGTGCCACGTACGCTACATAGATTCTTTTG
TGTAATCCCAAGAAAAACACGTGCCACGCATGCTAGATCCCTGCTCTCAT
TCACTCGTGCCTGCTCCGTTTCTTCGTACACTGCTGAGCCCTGACACCGT
GCACATGATATGGTCGAGTCCTGAGACTGAGTGACTTCTGAACATTTTTC
GCCACGCGTTGTGCTTGCCATGCATCGCAGCGACCAAGAAATAGAGCTGC
TTGTCAGAGAAGCTGATGCTAATGGAGACGGGTGAGTGGCAGCGCGAACA
CATACCTACATACCTACATGCTTTGCCAGTGCTTCACGGGTGGCTTTGTT
GCTCATGTATTTGCACATGCTGCTACTAGTCAGCACTGTCACCAGCGCTG
GGAGCTCTGTTGCGTGCTATCAGATCTGATGTTTGCCATCGGAACACTGT
CAAGGTCACTCGACCATCAGGGTCAGCACGCTGCTATTGGTCAGCATTGT
CACCAACGCTGAGCTCTGTTGCATGCTATCGGACGTGGTATCGCCATTGT
AACACTGTCGAGATCACTAGGCGGCACCATTGGCACTGGTGTGGACATTG
CACACGGGATGCGCAGTTGCCCCCGCTGTGGGACTCGAATTAGGTTAGGG
TTAGGGCGGCAGTGAACGCTCTTGCCACCAAGTGAGTCAGGCATGCAACT
GGCACACCAGTGGATGTCTACAACGACAGACGCACGGGTGGGTATGACAA
GCACAGCTAATGCAGCAGATTCTGCAACTTTTGTGGCACAACAAACAGCG
CTGCCATCACAACCTTGGTCATGCGTTCCTGCCAAGCGACGACGTGTTAA
TTCAGTTCTGTCAGGGCGCAGAGCTCACTTATTGCTGCTCAATCTGCTGC
ATGATCATTGCATCACTTTGCAGCTACTGGTATGTGTACCCAGCCCCGCT
ATGCATCATTTTTTGTCAAATGAGTCATATCGAGCGCTTTCTATCATTTT
TGATCTGTATAAGCTCTCCGTATGTTCTCAGGTACTGCTCTGTATGTTCT
CAGGTACTGTACCTATACGCCTTCTTTCCTGGTTGATTGAGCGCTGTTAA
ATCAATTGAGCACTGCGTTGCCGCACTGCTCGCGCTGCTGCAGGGCCATC
GACCTACACGAGTTCACGGCCTTCCTGTACTCCTAGTGTACTCGTGAAGT
ACCCATCTAGATGCCTACCTGCTCCCGTTCCCTGCTGTCATCAACACACG
AGCGCAAACAAGCAGAACCAGGCACTGCTGCCTGTTACACCAAGGTTTGA
ACCTACATAGGTGGTGTCAGTTTGTGTGCTGGCAGCACCACCTGCTACGG
GTTCAACACAGTGGTCGTGAAGCGCCACCTGTGTTGTTTTTAAACATGTC
CTTATTTATGAGGCACACGAGTGCCGGTTGCGTTCCAAAACGCCCGCTTT
GTTTCCA
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Coding sequence (CDS) from alignment at Contig_37:383092..389448-

>mRNA_7837 ID=mRNA_7837|Name=jgi.p|Trimin1|349141|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=513bp|location=Sequence derived from alignment at Contig_37:383092..389448- (Tribonema minus UTEX_B_3156 )
ATGAGCAAGGAAATGAAGGCGCTGTCGACGGAGGAGGTGGAAGATTACGA
GGAGGCGTTTAAGAACTTTGACAAGGGTGGCAACGGGGAAATCGACCTGA
AGGAGCTGGGCATTGTGATGCGCTCACTGGGCTACTCACCAACAGACAAG
CAGCTCAGGGATATGCTTCAACAGGTCGATGAGGATGGAAATGGCGTGAT
CACGTTCAACGAGTTTGTGGAGATGATGCGGCGGTGTGAACTGTCCACGG
ACTTTGAGCTGGAGATCAAGGGCGCGTTTGAGTATGATATGTCCACGGAC
TTTGAGCTGGAGATCAAGGGCGCATTTGAGATGATGCTGCGGTGTGAACT
GTCTACAGACTTTGAGCTGGAGATCAAGGGCGCGTTTGAGTTCTTTGACA
AAGACGGCAGCGGTGATATCATACCAGAGGAGCTGGCATCCATCATGAGG
GGTCTCGGCGCAAACCTCAGGGCCATCGACCTACACGAGTTCACGGCCTT
CCTGTACTCCTAG
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