Trimin1|349141|estExt_Genemark1.C_Ctg_370047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349141
Unique NameTrimin1|349141|estExt_Genemark1.C_Ctg_370047
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length171
Homology
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A835YVZ2_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ2_9STRA)

HSP 1 Score: 271 bits (694), Expect = 3.790e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query:    1 MSKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLHEFTAFLYS 170
            MSKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLHEFTAFLYS
Sbjct:    1 MSKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLRAIDLHEFTAFLYS 170          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A835YVF8_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF8_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.580e-57
Identity = 107/182 (58.79%), Postives = 112/182 (61.54%), Query Frame = 0
Query:    6 KALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMXXXXXXXXXXXFEMMLXXXXXXXXXXXXXXXXXFFDKDGSGDIIPEELASIMRGLGANLR-----------------AIDLHEFTAFLYS 170
            +AL+ EEVEDYEEAFKNFDK GNGEIDLKELGIVMRSLGYSPTDKQLRDML+Q         TFNEFVEMMRRCELSTDFE+EIKGAFE                                    FFDKDG GDI  EELAS+MRGLGANL                  AI LHEFT FLYS
Sbjct:    6 RALTKEEVEDYEEAFKNFDKDGNGEIDLKELGIVMRSLGYSPTDKQLRDMLKQAXXXXXXXXTFNEFVEMMRRCELSTDFEMEIKGAFE------------------------------------FFDKDGDGDITSEELASVMRGLGANLSDQEIALLVKEADKNGDGAISLHEFTTFLYS 151          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A835YUT0_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT0_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.770e-30
Identity = 57/90 (63.33%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    5 MKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFE 94
            M+  + EE+EDY EAF NFDK  +GEID  ELG VMRSLGY+PTD+QL DM+ +VD DGNG I+F+EFV MMR+CE+ TDF+ EI  AF+
Sbjct:    9 MREATEEELEDYREAFNNFDKDQSGEIDEYELGTVMRSLGYNPTDEQLHDMMLKVDIDGNGSISFDEFVIMMRKCEVETDFDREITEAFK 98          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: D8LH46_ECTSI (Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH46_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.140e-29
Identity = 55/91 (60.44%), Postives = 72/91 (79.12%), Query Frame = 0
Query:    5 MKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEY 95
            +K L+ EEVED +E F+ FDK G+GEIDL EL  VM SLGYSPT+KQL DM+ +VD DGNG+I F EFV MMR+C++ TDF+ +I+ AF++
Sbjct:    9 IKDLTGEEVEDLKETFRTFDKDGSGEIDLDELRTVMTSLGYSPTNKQLEDMMAKVDLDGNGLINFAEFVTMMRKCKVDTDFDRQIREAFKF 99          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: D8LJU6_ECTSI (Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU6_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 8.320e-29
Identity = 56/94 (59.57%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    2 SKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEY 95
            +K  K LS EE+EDY+EAF NFDK GNG ID  ELG+VMRSLGYSPT++QL++M+ +VD D +G I+F+EFV MM+  E+ TDF  EI  AF++
Sbjct:    5 AKTTKELSEEEIEDYKEAFSNFDKDGNGNIDELELGVVMRSLGYSPTNQQLKEMMAKVDTDQSGGISFDEFVAMMQLGEVETDFTKEINEAFKF 98          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A835Z1Q3_9STRA (Calmodulin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 5.030e-28
Identity = 55/93 (59.14%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    2 SKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFE 94
            S EM+ L+ EE++DY+EAF NFDK GNGEID  EL  VMRSLGY+PTD+QL DM+  +D DGN      EFV MMR+CE+ TDF+ E++ AF+
Sbjct:    7 SSEMRELTQEELDDYKEAFDNFDKDGNGEIDEIELSTVMRSLGYNPTDEQLHDMMLNIDLDGN------EFVTMMRKCEVETDFDREVREAFQ 93          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A6H5JMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF0_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.470e-27
Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    6 KALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEY 95
            K LS EE+EDY+EAF NFDK  +G ID  ELG+VMRSLGYSPT++QL++++ +VD DGNG I+F EFV MM+  E+ TDF+ EI  AF++
Sbjct:   72 KELSEEEIEDYKEAFSNFDKDCSGNIDESELGVVMRSLGYSPTNEQLKEIMAKVDTDGNGGISFEEFVAMMQLGEVETDFKKEINEAFKF 161          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A0V0WQS6_9BILA (Calmodulin n=5 Tax=Trichinella TaxID=6333 RepID=A0A0V0WQS6_9BILA)

HSP 1 Score: 99.0 bits (245), Expect = 2.860e-23
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 0
Query:    8 LSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFE 94
            L+ E++ +++EAF  FDK G+G+I  +ELGIVMRSLG  PT+ +LRDM+ +VDEDGNG I F+EF++MM R    +D E E+K AF+
Sbjct:    8 LADEQIAEFQEAFNLFDKDGDGKITSQELGIVMRSLGQRPTESELRDMVNEVDEDGNGTIEFDEFLQMMSRKMKDSDSEQELKEAFQ 94          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A0V1J8K8_TRIPS (Calmodulin n=2 Tax=Trichinella TaxID=6333 RepID=A0A0V1J8K8_TRIPS)

HSP 1 Score: 99.0 bits (245), Expect = 2.940e-23
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 0
Query:    8 LSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFE 94
            L+ E++ +++EAF  FDK G+G+I  +ELGIVMRSLG  PT+ +LRDM+ +VDEDGNG I F+EF++MM R    +D E E+K AF+
Sbjct:    9 LADEQIAEFQEAFNLFDKDGDGKITSQELGIVMRSLGQRPTESELRDMVNEVDEDGNGTIEFDEFLQMMSRKMKDSDSEQELKEAFQ 95          
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Match: A0A6P7S8Z1_OCTVU (neo-calmodulin-like n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7S8Z1_OCTVU)

HSP 1 Score: 98.6 bits (244), Expect = 3.730e-23
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    8 LSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDKQLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFE 94
            LS++E+E+Y EAF  FD+  +G I  KELG V+RSLG +PT+ +LRDM+ +VD DGNG I FNEF+EMM +C+  T+   E+  AF+
Sbjct:    5 LSSDEIEEYREAFTMFDRDKDGRITAKELGTVLRSLGQNPTEVELRDMINEVDIDGNGTIEFNEFLEMMMKCKSETNERQEVTDAFK 91          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349141 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVZ2_9STRA3.790e-91100.00Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID... [more]
A0A835YVF8_9STRA3.580e-5758.79Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID... [more]
A0A835YUT0_9STRA3.770e-3063.33Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID... [more]
D8LH46_ECTSI2.140e-2960.44Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LJU6_ECTSI8.320e-2959.57Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosu... [more]
A0A835Z1Q3_9STRA5.030e-2859.14Calmodulin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A6H5JMF0_9PHAE1.470e-2760.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0V0WQS6_9BILA2.860e-2354.02Calmodulin n=5 Tax=Trichinella TaxID=6333 RepID=A0... [more]
A0A0V1J8K8_TRIPS2.940e-2354.02Calmodulin n=2 Tax=Trichinella TaxID=6333 RepID=A0... [more]
A0A6P7S8Z1_OCTVU3.730e-2352.87neo-calmodulin-like n=1 Tax=Octopus vulgaris TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 124..152
e-value: 0.0013
score: 28.0
coord: 51..79
e-value: 2.7E-6
score: 36.9
coord: 15..43
e-value: 5.3E-4
score: 29.3
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 128..148
e-value: 0.0074
score: 15.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 16..77
e-value: 4.6E-14
score: 52.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 47..82
score: 14.764463
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 11..46
score: 14.708673
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 120..155
score: 12.755995
IPR002048EF-hand domainCDDcd00051EFhcoord: 15..77
e-value: 1.65489E-15
score: 65.2617
NoneNo IPR availableGENE3D1.10.238.10coord: 1..86
e-value: 5.6E-27
score: 96.0
NoneNo IPR availableGENE3D1.10.238.10coord: 98..164
e-value: 8.4E-9
score: 37.2
NoneNo IPR availablePANTHERPTHR23050:SF427CALMODULIN-1coord: 107..158
coord: 7..94
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 107..158
coord: 7..94
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 60..72
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 5..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_37contigContig_37:383363..389448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349141mRNA_7837Tribonema minus UTEX_B_3156 mRNAContig_37 383092..389448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349141|estExt_Genemark1.C_Ctg_370047 ID=Trimin1|349141|estExt_Genemark1.C_Ctg_370047|Name=jgi.p|Trimin1|349141|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=171bp
MSKEMKALSTEEVEDYEEAFKNFDKGGNGEIDLKELGIVMRSLGYSPTDK
QLRDMLQQVDEDGNGVITFNEFVEMMRRCELSTDFELEIKGAFEYDMSTD
FELEIKGAFEMMLRCELSTDFELEIKGAFEFFDKDGSGDIIPEELASIMR
GLGANLRAIDLHEFTAFLYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair