Trimin1|349122|estExt_Genemark1.C_Ctg_360119 (polypeptide) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A835Z2K1_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K1_9STRA) HSP 1 Score: 380 bits (976), Expect = 1.630e-133 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 Query: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQETTKRAILHQVCHL 189 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQETTKRAILHQVCHL Sbjct: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQETTKRAILHQVCHL 189
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A6H5JLZ3_9PHAE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ3_9PHAE) HSP 1 Score: 182 bits (462), Expect = 1.990e-55 Identity = 83/178 (46.63%), Postives = 124/178 (69.66%), Query Frame = 0 Query: 12 LGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQETTKRAILHQVCHL 189 + +I+L++ +M SFG G +V+LPG+ P FPFGTPY+E+ D L ++ L+ RN VL LL R+A TKR PERWQ L V ++DVV+CFE+R+FD+ V+DLQ RD FKP+ ++S+ ++D+ D+ A DV LC+MLE C+DL+S+ + ++ F+ +KR +LHQVCH+ Sbjct: 1 MAEILLKEHDMRAQSFGTGREVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGGHVASFDVVVCFESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSANDSAAAAGDVLDLCKMLEDCDDLDSNAAELLNDFRIRSKRTVLHQVCHI 178
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A6H5KZG9_9PHAE (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG9_9PHAE) HSP 1 Score: 175 bits (444), Expect = 3.930e-50 Identity = 80/189 (42.33%), Postives = 128/189 (67.72%), Query Frame = 0 Query: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQETTKRAILHQVCHL 189 +VCS+N NRS++ +L++ N V S+G G +V+LPG+ P VFPFGTPY ++ D L A D+ L+++N +L L+AR+A K P+R+Q++ + +DVV+CFE R+F + V+DLQ RD FKP+ +I++ +KD+ +++ A + V LC ML+ L+ + +G++E F TKR +LHQVCH+ Sbjct: 204 VVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEDLQSRDPETFKPLHVINMTIKDSFEESAAAADSVLELCRMLDGVSQLDDETAGVLEVFTRKTKRTVLHQVCHV 392
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A836C7Y0_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y0_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.930e-48 Identity = 75/125 (60.00%), Postives = 99/125 (79.20%), Query Frame = 0 Query: 65 QLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQETTKRAILHQVCHL 189 QL+ R +L+LL+RDACTKRHPERWQDL SA +D++ICF ++IFD+C++D Q+R DFKPI ++S+PV DTPQ AE+AM DV L +ML+AC+DL++ + +VEAFQ TTK ILHQVCHL Sbjct: 78 QLHARAALLKLLSRDACTKRHPERWQDLGSADTAKFDIIICFNDKIFDLCIEDFQNRPPFDFKPIHIVSLPVMDTPQHAEQAMVDVLKLVKMLDACDDLDNHGADVVEAFQATTKWPILHQVCHL 202
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A6S8R8X9_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8R8X9_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.330e-48 Identity = 90/196 (45.92%), Postives = 126/196 (64.29%), Query Frame = 0 Query: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAA--DKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALD-FKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQET----TKRAILHQVCHL 189 +VCSSN+NRS+ G +VL + V S+G GT V+LPG+S EP VF FGTPY EM++ L A D+ +T NGVL+L R A K P+RWQD+ S + +DVVI FE RI+D V+DLQ R+ + F+PI +I + KD P +A+ LC +LEA +DL + GIVE+FQ+ T+ +L+Q+C+L Sbjct: 61 VVCSSNINRSMEGHVVLGNAGLRVESYGTGTSVRLPGKSALEPRVFKFGTPYEEMYNSLAATPEDEAFFTHNGVLQLCRRGAAVKTAPQRWQDMSSDFIATHDVVIAFEERIYDAVVEDLQTREPTESFEPIHVICLDTKDNPHEAKLQGRVALELCWLLEAADDLVVEAPGIVESFQDERMTHTQIKVLYQLCYL 256
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A7S2A5S7_TRICV (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A5S7_TRICV) HSP 1 Score: 166 bits (420), Expect = 3.510e-48 Identity = 92/196 (46.94%), Postives = 122/196 (62.24%), Query Frame = 0 Query: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAA--DKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDAL-DFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQET----TKRAILHQVCHL 189 +VCSSN+NRS+ +VL + V S+G GT V+LPGRS EP VF FGTPY EMH L A D+ +T NGVL+L R A KR P+RWQD+PS V +DVVI FE RIFD ++DLQ R+ DF PI ++ + KD P +A+ LC +LE DL ++ I++AFQE T +L+Q+C+L Sbjct: 51 VVCSSNINRSMEAHVVLGNAGLRVESYGTGTTVRLPGRSAMEPRVFKFGTPYEEMHASLAATPDDEAFFTHNGVLQLCRRGAAVKRAPQRWQDVPSREVQKHDVVIAFEERIFDAVIEDLQMREPTEDFLPIHVVCLDTKDNPHEAKLQGRVALELCWLLEGANDLVLEMPEILDAFQEERMTHTPIKVLYQLCYL 246
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A061RLN1_9CHLO (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RLN1_9CHLO) HSP 1 Score: 163 bits (413), Expect = 9.450e-48 Identity = 83/187 (44.39%), Postives = 118/187 (63.10%), Query Frame = 0 Query: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQETTKRAILHQVC 187 MVC+SN NRS+ +L++ N V S+GVG VKLPG S EP V+ FGTPY +++ L A D +LYTRNG+L++L R+ K PERWQD YDVV+CFE R+FD CV DLQ R+ + + ++++ VKD ++A A LC+ML+A ED E ++ I+ F++ T R L+ +C Sbjct: 13 MVCASNQNRSMEAHALLKEHNFRVGSYGVGQHVKLPGASAKEPNVYGFGTPYKRIYEELSAKDPELYTRNGLLKMLHRNMGVKTAPERWQDCRDR----YDVVVCFEERVFDACVDDLQKREQSLCRSVLVVNLEVKDNHEEAANAAPHALRLCQMLDASEDWEEEIDAILNVFEKETGRRPLYTIC 195
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A7S1FXY9_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FXY9_9STRA) HSP 1 Score: 162 bits (411), Expect = 7.320e-47 Identity = 87/194 (44.85%), Postives = 121/194 (62.37%), Query Frame = 0 Query: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALD-FKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQET----TKRAILHQVCHL 189 +VCSSN+NRS+ G +VL + V S+G G+ V+LPGRS +P +F FGTPY +M++ L D+ + +NGVL+L R + K P+RWQD PS A+ ++DVVI FE RIFD V+DLQ RD D F PI +I + KD P +A LC +LE DL ++ IVE FQ T+ +L+Q+C+L Sbjct: 50 VVCSSNINRSMEGHVVLGNAGLKVESYGTGSTVRLPGRSAMDPRIFKFGTPYAQMYESLATEDEAFFFQNGVLQLCRRGSGVKVAPQRWQDTPSTAIASHDVVIAFEERIFDAVVEDLQTRDPTDDFAPIHVICLDTKDNPHEAHIQGRVCLELCWLLENAGDLVAEAPEIVENFQMVHMSHTQIKVLYQLCYL 243
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A7S1GS15_CYCTE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GS15_CYCTE) HSP 1 Score: 162 bits (409), Expect = 1.380e-46 Identity = 93/197 (47.21%), Postives = 121/197 (61.42%), Query Frame = 0 Query: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAA--DKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDAL-DFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLE-ACEDLESDVSGIVEAFQET----TKRAILHQVCHL 189 +VCSSN+NRS+ +VL + V S+G GT V+LPGRS EP +F FGTPY EM+ L A D + RNGVL+L R A K P+RWQD P AV +DVVI FE RIFD ++DLQ R+ DFKPI +I + KD P +A+ LC MLE A +DL + IV+AFQ+ T +L+Q+C+L Sbjct: 45 VVCSSNINRSMEAHVVLGNAGLKVESYGTGTQVRLPGRSAMEPRIFKFGTPYEEMYKSLAATQDDAAFFMRNGVLQLCRRGAAVKVAPQRWQDTPPEAVTKHDVVIAFEERIFDAVIEDLQTREPTEDFKPIHVICLDTKDNPHEAQLQGRVALELCWMLESASDDLINQAPTIVDAFQKERMTHTPIQVLYQLCYL 241
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Match: A0A7S2Y8T2_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=4 Tax=Naviculales TaxID=38748 RepID=A0A7S2Y8T2_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.620e-46 Identity = 87/196 (44.39%), Postives = 119/196 (60.71%), Query Frame = 0 Query: 1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAA--DKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDAL-DFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQET----TKRAILHQVCHL 189 +VCSSN+NRS+ +VL + V S+G GT V+LPGR+ EP +F FGTPY EMH + D +TRNGVL+L R A KR P+RWQD+ S + +++VI FE RIFD ++DLQ R DF+P+ +I + KD P +A LC LE CEDL+ + + I++ FQ T IL+QVC+L Sbjct: 32 VVCSSNINRSMEAHVVLGNAGLRVESYGTGTQVRLPGRTAMEPRIFKFGTPYEEMHQSMNVTPEDTTYFTRNGVLQLCQRGAAVKRAPQRWQDMASEDISKHNIVIAFEERIFDAVIEDLQLRQPTEDFRPMHVICLDTKDNPHEAARQGIVALRLCWRLEHCEDLDLEAAEIIDEFQRERDSETNIKILYQVCYL 227 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349122 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|349122|estExt_Genemark1.C_Ctg_360119 ID=Trimin1|349122|estExt_Genemark1.C_Ctg_360119|Name=jgi.p|Trimin1|349122|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=190bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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