mRNA_8332 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349039
Unique Name	mRNA_8332
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349039 vs. uniprot
Match: A0A835YWU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWU0_9STRA)

HSP 1 Score: 787 bits (2033), Expect = 1.720e-284
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 1

Query:    1 MTPQRYAQREAALEFVLRLVPGQWLYAAAVCRQWRNLYSEVFSDTCTYYTSAASSSQCLQYAFESGLKLAERDFHRAAGSHGSIDTIQLARSLGMRWSPDLCTGAARTGRVELLRWLRAQGCPXXXXXXXXXXXXVAGAADALTQELRRELDFYISTGPAGAGAGPVPGAVPAAVLPLYAAGARLLHARPEIRAVNGSSVKRAWGYSVAMVAAARGDIAVLQWVWTTSPWTANSYYICXXXXXXXXXXXXXXMLRRGCLWDVFKGDLVTEAARNGHLNMLKWLRAMGFKFGARTVQLAXXXXXXXXXXXXXXXGAEVNAPALRAHAAAGGSVPLLRFLDEAAAADAEAQAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAQLNDMLLQACIHGRTNAAAWLRARGAQWPERLWTVDTYGADYRCFRLQTLKWAIAEGCPWGPWPAGLCQSLRKRRGGGRGEGACGAAAVAVASA 1473
            MTPQRYAQREAALEFVLRLVPGQWLYAAAVCRQWRNLYSEVFSDTCTYYTSAASSSQCLQYAFESGLKLAERDFHRAAGSHGSIDTIQLARSLGMRWSPDLCTGAARTGRVELLRWLRAQGCPXXXXXXXXXXXXVAGAADALTQELRRELDFYISTGPAGAGAGPVPGAVPAAVLPLYAAGARLLHARPEIRAVNGSSVKRAWGYSVAMVAAARGDIAVLQWVWTTSPWTANSYYICXXXXXXXXXXXXXXMLRRGCLWDVFKGDLVTEAARNGHLNMLKWLRAMGFKFGARTVQLAXXXXXXXXXXXXXXXGAEVNAPALRAHAAAGGSVPLLRFLDEAAAADAEAQAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAQLNDMLLQACIHGRTNAAAWLRARGAQWPERLWTVDTYGADYRCFRLQTLKWAIAEGCPWGPWPAGLCQSLRKRRGGGRGEGACGAAAVAVASA
Sbjct:    1 MTPQRYAQREAALEFVLRLVPGQWLYAAAVCRQWRNLYSEVFSDTCTYYTSAASSSQCLQYAFESGLKLAERDFHRAAGSHGSIDTIQLARSLGMRWSPDLCTGAARTGRVELLRWLRAQGCPXXXXXXXXXXXXVAGAADALTQELRRELDFYISTGPAGAGAGPVPGAVPAAVLPLYAAGARLLHARPEIRAVNGSSVKRAWGYSVAMVAAARGDIAVLQWVWTTSPWTANSYYICXXXXXXXXXXXXXXMLRRGCLWDVFKGDLVTEAARNGHLNMLKWLRAMGFKFGARTVQLAXXXXXXXXXXXXXXXGAEVNAPALRAHAAAGGSVPLLRFLDEAAAADAEAQAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAQLNDMLLQACIHGRTNAAAWLRARGAQWPERLWTVDTYGADYRCFRLQTLKWAIAEGCPWGPWPAGLCQSLRKRRGGGRGEGACGAAAVAVASA 491

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349039 vs. uniprot

BLAST of jgi.p|Trimin1|349039 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YWU0_9STRA	1.720e-284	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_34	contig	Contig_34:987578..997365 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349039\|estExt_Genemark1.C_Ctg_340093
Hectar predicted targeting category	other localisation
TranscriptId	349361
Track	FilteredModels1
ProteinId	349039

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349039	gene_8332	Tribonema minus UTEX_B_3156	gene	Contig_34 987578..997365 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349039	Trimin1\|349039\|estExt_Genemark1.C_Ctg_340093	Tribonema minus UTEX_B_3156	polypeptide	Contig_34 987578..997365 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8332_14	exon_8332_14	Tribonema minus UTEX_B_3156	exon	Contig_34 987578..987644 -
exon_8332_13	exon_8332_13	Tribonema minus UTEX_B_3156	exon	Contig_34 987713..987793 -
exon_8332_12	exon_8332_12	Tribonema minus UTEX_B_3156	exon	Contig_34 989059..989263 -
exon_8332_11	exon_8332_11	Tribonema minus UTEX_B_3156	exon	Contig_34 990157..990339 -
exon_8332_10	exon_8332_10	Tribonema minus UTEX_B_3156	exon	Contig_34 991605..991730 -
exon_8332_9	exon_8332_9	Tribonema minus UTEX_B_3156	exon	Contig_34 992377..992452 -
exon_8332_8	exon_8332_8	Tribonema minus UTEX_B_3156	exon	Contig_34 992931..993047 -
exon_8332_7	exon_8332_7	Tribonema minus UTEX_B_3156	exon	Contig_34 993528..993570 -
exon_8332_6	exon_8332_6	Tribonema minus UTEX_B_3156	exon	Contig_34 993649..993704 -
exon_8332_5	exon_8332_5	Tribonema minus UTEX_B_3156	exon	Contig_34 994201..994256 -
exon_8332_4	exon_8332_4	Tribonema minus UTEX_B_3156	exon	Contig_34 994453..994510 -
exon_8332_3	exon_8332_3	Tribonema minus UTEX_B_3156	exon	Contig_34 995597..995620 -
exon_8332_2	exon_8332_2	Tribonema minus UTEX_B_3156	exon	Contig_34 995818..995969 -
exon_8332_1	exon_8332_1	Tribonema minus UTEX_B_3156	exon	Contig_34 997134..997365 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8332	CDS_8332	Tribonema minus UTEX_B_3156	CDS	Contig_34 997134..997365 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_34:987578..997365-
coding sequence from alignment at Contig_34:987578..997365-

spliced messenger RNA

>mRNA_8332 ID=mRNA_8332|Name=jgi.p|Trimin1|349039|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1476bp|location=Sequence derived from alignment at Contig_34:987578..997365- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACACCACAGCGCTATGCTCAGAGGGAGGCGGCGCTCGAATTCGTCTT
GCGGCTGGTTCCTGGACAGTGGCTGTACGCAGCTGCCGTGTGCAGGCAGT
GGCGAAACCTGTACTCGGAGGTGTTCAGTGACACCTGCACCTATTACACC
TCAGCTGCGAGCTCCAGCCAGTGTCTGCAGTACGCCTTCGAGAGCGGCCT
GAAGTTGGCGGAGAGAGATTTTCATCGCGCTGCGGGCAGCCACGGCAGCA
TAGACACGATACAGCTGGCGCGGAGCCTGGGCATGCGGTGGTCGCCGGAC
CTGTGCACTGGAGCTGCCAGGACAGGGCGCGTGGAGCTGCTGCGCTGGCT
GCGGGCGCAGGGGTGCCCGTGGAACGAGAGCATGGCGTGCCCGTGGACCG
AGAGCGTGGCTGGCGCCGCCGACGCCCTCACACAAGAACTCCGCCGGGAG
CTCGACTTCTACATCAGCACGGGGCCGGCCGGGGCCGGGGCCGGCCCCGT
GCCTGGGGCCGTGCCGGCGGCGGTCCTGCCGCTGTACGCCGCAGGCGCGC
GCCTCTTGCACGCGCGCCCTGAGATTCGCGCCGTCAACGGCAGCAGTGTG
AAGCGGGCCTGGGGGTACAGCGTGGCAATGGTGGCTGCAGCTAGAGGCGA
CATAGCGGTGCTGCAGTGGGTGTGGACGACCTCCCCTTGGACGGCAAACT
CGTACTACATCTGCAATGCGGCTGCCAGGCATGGTCAGCTCGCTGCGCTC
CAGTGGATGCTGCGGCGGGGATGCCTCTGGGACGTGTTCAAGGGCGATCT
GGTGACAGAAGCAGCGCGAAACGGCCACCTAAACATGTTGAAGTGGCTCA
GGGCGATGGGCTTCAAGTTTGGGGCGCGAACGGTGCAGCTGGCGGTGCGC
GGCGGGCACTTCGAAACCGTCAAGTGGCTGCACAAAGAAGGTGCAGAGGT
TAACGCGCCGGCGCTCCGCGCGCACGCTGCCGCCGGCGGCTCCGTGCCGC
TGCTGCGCTTTCTGGACGAAGCCGCAGCTGCCGATGCGGAGGCTCAGGCG
GTGGCAGCGGCTCAACTCGCAGCTGCAGTTGACGATGGCGCGGATAGCGA
CGACGATGACGGCAGCGGTAAAGCCGCGGCAGTTGCAGCGGCGCTGGAGG
CTGCGCAAGCCGCGGCAGCAGCAGCCGTCGCCAGCAGCGCTCAGCTCAAC
GACATGCTGCTGCAGGCGTGCATTCACGGTCGCACGAATGCGGCAGCGTG
GCTGCGCGCGCGCGGCGCACAGTGGCCGGAGCGCCTGTGGACAGTGGACA
CGTACGGGGCGGACTACCGCTGCTTCAGACTGCAGACGCTCAAGTGGGCC
ATCGCCGAGGGGTGCCCCTGGGGCCCCTGGCCAGCAGGCCTGTGCCAGAG
CCTGCGCAAGAGGAGGGGGGGCGGAAGGGGGGAGGGGGCGTGCGGTGCCG
CTGCCGTCGCGGTTGCTAGCGCTTGA

protein sequence of jgi.p|Trimin1|349039

>Trimin1|349039|estExt_Genemark1.C_Ctg_340093 ID=Trimin1|349039|estExt_Genemark1.C_Ctg_340093|Name=jgi.p|Trimin1|349039|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=492bp
MTPQRYAQREAALEFVLRLVPGQWLYAAAVCRQWRNLYSEVFSDTCTYYT
SAASSSQCLQYAFESGLKLAERDFHRAAGSHGSIDTIQLARSLGMRWSPD
LCTGAARTGRVELLRWLRAQGCPWNESMACPWTESVAGAADALTQELRRE
LDFYISTGPAGAGAGPVPGAVPAAVLPLYAAGARLLHARPEIRAVNGSSV
KRAWGYSVAMVAAARGDIAVLQWVWTTSPWTANSYYICNAAARHGQLAAL
QWMLRRGCLWDVFKGDLVTEAARNGHLNMLKWLRAMGFKFGARTVQLAVR
GGHFETVKWLHKEGAEVNAPALRAHAAAGGSVPLLRFLDEAAAADAEAQA
VAAAQLAAAVDDGADSDDDDGSGKAAAVAAALEAAQAAAAAAVASSAQLN
DMLLQACIHGRTNAAAWLRARGAQWPERLWTVDTYGADYRCFRLQTLKWA
IAEGCPWGPWPAGLCQSLRKRRGGGRGEGACGAAAVAVASA*

mRNA from alignment at Contig_34:987578..997365-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8332 ID=mRNA_8332|Name=jgi.p|Trimin1|349039|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9788bp|location=Sequence derived from alignment at Contig_34:987578..997365- (Tribonema minus UTEX_B_3156 )
ATGACACCACAGCGCTATGCTCAGAGGGAGGCGGCGCTCGAATTCGTCTT
GCGGCTGGTTCCTGGACAGTGGCTGTACGCAGCTGCCGTGTGCAGGCAGT
GGCGAAACCTGTACTCGGAGGTGTTCAGTGACACCTGCACCTATTACACC
TCAGCTGCGAGCTCCAGCCAGTGTCTGCAGTACGCCTTCGAGAGCGGCCT
GAAGTTGGCGGAGAGAGATTTTCATCGCGCTGGTGAGTTGTTGTTCAAGT
TTGTCAGCTGCTGCTGCGAGCGTGTGTCATGACTGAACAGTTCAAATCCA
GCTCACTGTGTGAATGCTGTGCGCAATTTAGATTTCACCTGCTTGCACAC
ATCAGATACGGGTACCGAGATTAGCATCATGAGCCGCTGTACCCCTATAA
TCTTTTTTCGAGGCCCACCTGTGTGGCCAATCGCATATACGGCAGCAAGG
CTGCTGCAGAATTCGTCACAGAAACATGTAGTAAAGCCTACCATCTTCTG
GGATGTCACCAGGGGTGTGATGAAGCCATGAAGGTCGACGCTGACAGTGC
GTCATCAAGGTGTGTGCGCCTCTTGCTGATGCGCAAGTTGCTGAGGTGCA
GGCTGGTACCTCAAGCGCAACCAAACCAAGTACCTGCCAGCTGCGTTGTG
TACACTTGAAAAGGGGGATTGTTATGGTGCCCCCCGCCCCAGTCACTTTG
CAACTATTCATCACTTCAACGGCAGCCTCAATGCACTTAGACAGTGGCAC
TTCAATTTCCCGCAGCCTGGCAGACATCACTGTAACCTCAACTTTATTGT
TGAAATTATGAATAATTGTATTCCATCAACGCTCATGTGGTGGGTCGCCC
AAAGTGAAGTTGACAATCCGTAGTCTTTCAGATGCGCTGTTGCAGCTGGC
ACATGGCTTGGGAGAGCCATCCTTGCAAAACTTGTGAAGCTAATGCTCCA
TGATTCTACGCCCCGCTGCAGGTGGCAGCCATGGCAGCATAGTCACAAGA
CAGCTGGCGCGCAGCTCGAGCATACGATTGGGTGGACTAAACTTGAAGTT
GACACTCCCGCGGTTTCCCACGCCCGCGCTGCAGCCAGCAGCCACGGCAG
CATAGTCACGGTGCAGCTGGCGGGCATGCATGCTGAACCAAACTTGAAGT
TGACACCATCAACTTGAAGTTGAAAACTCAGCGTCACGTCGCGCCTTGAG
CTGCAGCCGGCAGCCACATGCGATTTGGTGGCCAAACTAAACTTGAGCTT
GACACTCGGCGTTTCCACGTGTGCTGCAGCCGGCAGCCACGGCAATATAG
ACACGATAGAGCTGGCGTGGAGGCTGGGCATGATGCGATGGTGGCCAGAC
TAAACTTGAAGTTGACACTCCGTCTCTTTTCACGCCTTTGCTGCAGCGGG
CAGCCACGGCAGCATAGACACGATACAGCTGGCGCGGAGCCTGGGCATGC
GGTGGTCGCCGGACCTGTGCACTGGAGCTGCCAGGACAGGGCGCGTGGAG
CTGCTGCGCTGGCTGCGGGCGCAGGGGTGCCCGTGGAACGAGAGCATGGT
GAGCGCTGGTTGCACAGTTGAAGTTTAGATCTAACTTCAAACCTAAGACC
TAACTCTAAACTCGCACATGGCAGCTGGCTGCGAGGGCAGGGGTGCCCGT
GGAACAAGAGCATGGTGAGCGCTGCTGCGCACTTGAACTTCAGAGTTGAC
TGCAACATTACACATAACGGCAGCTGGCGGTGTGCCCCCACTCAGGCGTG
CCCGTGGACCGAGAGCGTGGTGAGCGCTGTTGCTTGACTGAACTATTACG
CCTTGCTGTAAACGAGCGACCTTATTCTAAAGTTACGCATGGCAGCTGGT
GGCGCACTCCCGTTCAGGGGCACCCGTGACATGAGGAACGAGAGCCAGGT
GAGCACTGCCGCACAGTTAAACTTCAGACCTAACTTCGAACTTACACACG
GTGGCAGCTGGCAGCGTCCTGCACGGGTCATTGCAGCGACCTGAAGTGCA
CGCCGCCTCGCTCACCATTAGGGAGGTCTGCTGCCATATGAAGCTCCCAC
TGAGAGGTGCCCGTGGAATGAGAGCATGGTGAGCGAATTGGCGGTCAACA
CACACTTTCGTCATGTGCCAAAGCAGGCCGGTCAGTATTAGGAGCGTACG
GAGCACCGATCCTAATCAGGCCTGGGTGTTGTATCGGGCATCCCTTTTTA
GGCCTGGTGGCACTTTCTTGTGGTCGCCCTGTAGGTACCTGGCGTTTCAG
CGGAGGGCGCAGACCGTAGCGCTGAAACCCCAGGCCCACTTCACGCCGCG
TGACGTCGCTACGCCCAGCGTTCGTGCAGCTGAGTAAAGGCATCATGGGC
ACTCTTATCAGCAAGGGCGTCGATGACCACATGGAAAAAGATCAAAGAGA
TCGTAGAGCTCCTGGTGACAAGGTGTGGTCAGGCGCCAGCGCCTTCCACT
AATGACCGTGGTCGCCGCTGCTGCAGTCATTGGCCACGAGTCCAACAGTG
CCACCATATGCACAGTAGTCAAGAAGACTTCTGTGTGCAAGCTTTTTAGC
ATTCGAGGCATGGGTGTTCGGTATGGAAAGGTCTCACGTGCTCAGTAGGG
CCAGCTCCAGCTGGTAGCCCACACACAGGAGGTTCAGCAGCTTCTGACAG
CGCTCTTGCATGCGCGTAGTGCGGAAGGTCGTGAGCCACATGCCGCCTCT
TACGGCGCACATGTCAGAGGCGCGTTACTGCGAAGAGCGGACCCAGCGGA
GGTGCAGCCAGGTTAGGGTTAGGGGTTAGGGTGAGGGGTTAGGGTTAGGG
TTAGGGTTAGGGCGTCACCGGCGCTGCAGGGTGGTTCGTCGCAACGCTGG
CGCAGGCTGGCGCCGCCGACGCCCTCACACAAGAACTCCGCCGGGAGCTC
GACTTCTACATCAGTGCTGGCAGCCAACAGCGCGCGAAGTTCAAGTCGGC
ACTGCAACACGGCCAGACTGACACTGCCTGGTGGGGTGGGGTGTTCGACT
TCCATACCAGGCAGCGGCGTCGGGGGAACAAACGCCCGCCTCCAATAACG
CGCTATTGGCGGCGGCCAGACCCGAGAAAGCTGCCATGCCGCCGCCGGCA
CGGCCCCAGGCACGGGGCCGGCCGGGGCCGGGGCCGGCCCCGTGCCTGGG
GCCGTGCCGGCGGCGGTATGGCAGCTTTCTCGGGTCTGGCCGCCGCCGAT
GGCGCCGGCGTTTGTCTCTTCGCTGCCGCCGCCGCCTGGTGTGGAAGTCG
AACACGCCCCGCGTCAGGCAGTGTCGGTCTGGCGCACTTGCAGCGCCGGC
GTGAACTCCTCGCGCTGTTGGTCGCCAGCGCGATCGTAGACATCGAGCTC
ACGGTAGTTTTTGCGTGTGAGGACGCCGGCGGCGCCACCCCGCTTAGGGT
TAGGGTTAGGGTTAGGGTTAGGGTTAGCGTTGCGGCGGACCGCCCTGCAG
CGCCGCTGATGCCAGCGAGCCAGCGGCCGCACCTCCGCCAGGTCCCGCCG
TTCTACGCCGCAGACGCGCCTCTGGCGCGCGCGCCCTGAGAGCTGGTATG
TTGTCATCAGCGACCTTGCTGATGAGCATTGCAGCACACCGCTCTGCATG
GCAGCAAATCACCCTTGTAGCGTCGCTGACGCTGGCGATTTAGCGGCTGC
ACCTCCGTCAGGTCCTGCCGCTGTACGCCGCAGGCGCGCGCCTCTTGCAC
GCGCGCCCTGAGATTCGGTAAGTGGTCATCAACGAGATGTTTATCACCCA
TCAATGACCTTATTGATTACCAAGCTGCGCGAACGCTGGGCGCAGCGCCG
TCAACGGCAGCAGTGTGAAGCGGGCCTGGGGGTACAGCGTTCGGGGCTGC
GCCTAATCCTAACCCTAGCCCTAACCCTAACACTATTCGTAGCCCTCCGC
TGAAACGCCAGGTAGCGTATGTTGGCCGTCAGACGTAACTTCAACTTCAA
ATTCACGCCATGGCAACCGGCAGGGTGCCCGTGGATTGAGAGCAGCGTGT
GAGCGCTGCTGCACAGTTGCACCAGTTAGTGAGAGCGCGCTTGATTCACA
CCTAATTGCGAACCAAACGGGCTGCGAGGAAAACCGCTGTTATAGCACAT
GTCTTGGAGGAATAATCTGTTTTTACTCTGTGAACTGAGTACACTGCAGA
GTAATTTTGAGGGTCTCTGAGCATCACCAAGCACAGTAAGAATAATTACT
GGGTGCTCCAACTGTCTACCGAGTAGAGTACTGTTACTGAGTAATTACCT
GGGAAGCCTGAGTAACAAAAATGCATCTGATAGTGCCTGCGTCTCTTCCT
TGCTCCCAATGAGAACAGGTGGCAATGGTGGCTGCAGCTAGAGGCGACAT
AGCGGTGCTGCAGTGGGTGTGGACGACCTCCCCTTGGACGGCAAACTCGT
ACTACATCTGCAATGCGGCTGCCAGGCATGGTCAGGTACGCGCATGCGAC
TATACCTATACTTACCCCTGGAGGTGCAGGTGTCGGGGAGGGCGACATCC
CCTTTGTCATCGAACTCGTACTACATCTGCAATGCGGCCGCCAGGCACGG
TCAGGTGCGCGCGCGTGACTGTATACCGCCATCTACCCAGGTGCAGGTCG
CATCGGCGAGGATCAGTATGGCGCTAGGGTTTCTTAGGTTTAGAATTAGG
ATTAGGTCTAGAAAACGGCATTGAGGATCAGGGTCAGGTCAGAGTTCACA
GTCTCGGTACTCTCGCGACGCTGTTTGTGCTTTGATTGAGGCGACATAGT
TGCTGAGCCTCCAGTTCCATGGGTCTTTAAGCGAAAAGCCTCAGAGAGGC
CCCAGCTTTTCTCTCGTCTTTTCATCGTCCACTTGGGGGGGGGTCATGTG
CTGCAGCGACATCACAGCAGCGCTCAGCATCATGCCCTCCTGTATGCGCT
TTGGTCTTTACAGCTCGCTGCGCTCCAGTGGATGCTGCGGCGGGGATGCC
TCTGGGACGTGTTCAAGGGCGATCTGGTGACAGAAGCAGGTGAGTCACTG
TTTGTGGTTGATACTTCAAGTTGAAGCTTGTGACACTGACGGAGCGCTGC
TAGTGGGACGGCTTCAAGGGCGGTTTGGTGACGGAAGCAGGTGAGGTACC
GCATGGGTGATACTTCAAACTGAAGTTTATGCTCCACAGGAATTATTGGT
GGCATGGCATACGTTATCGCATGTATCTAAACAAGTAGAGCCATACAGCT
GAGCTATGTGATGCTGAGCCTGTAACGGTGTACCCACTGCCCTGTGGCGT
CATCGTGCAACGGTCAACTGAACAGCCGTTGATGATTGGCGGCATGACCC
ACATCAGCGCGCGCAGTAGGTATGTATGTATGTATGTATGCGGCACGACT
CATATTAGCGCGCACACTATGTGTGCGTGTGCGGCACGACCCACATTGGC
TCACACAGTAGGTACGTATATGTATGCGGCATGACCCACGTTGGCGCACA
CAGTAAGTATGTATATATCGCGGCACACCCACATGAGTGCACACAGTAGA
ATCACGCGACCCTGACCACGGTGGCACCGCCCGATTCCGCTGAACATGCC
ACATGCCCTACATACCGTACGTAGTACAATTGTGCGACCCTGACAGCTGT
AATGCCATGCTTTCTCCCATTGTCTGTGCCACCAGCGCGAAACGGCCACC
TAAACATGTTGAAGTGGCTCAGGGCGATGGGCTTCAAGTTTGGGGCGCGA
ACGGTGCAGCTGGCGGTGCGCGGCGGGCACTTCGAAACCGTCAAGTGGCT
GCACAAAGAAGGTACTTCAAGTAGGTACTTCAAGTGCATGAAGTTGTATG
GCGATGACATTCTACTTTTGCCAGGAATTTTCGCCACGATTTGCTTCATC
GTGACGCAGTGATCATCTGGGCGTCTTGCTCAGGAGGCGAGAAACAACAA
CACGAGCATGTACTTCACCAGGAAATTTGTGCTGATCACCATCAGTCACT
CGTGCTAGTATAGTTTCGTGCTGAGGCTTAGGTCACTCTTTGCGACATTG
CGCACAAAGTTGATCTCTCACTCTGACAAGTCACACAGATAAAAATGTGC
CGAGAGTTTCAAAGTATTCATCATCTTCACATCATCAAACACGTGTATGC
GCTCGCCGCAGACCGCCGGCGCAGAGGCGATTGTGCCATCACGCACGCCG
CCGCTGGCTGCTTACAAAAAATCATACGGGGACCAGCGTAGAATGGGTAC
TTTTTGCAAGCCCCCGGGGGAAGTTGGCAGTGTGCCAAATCACTCCTGGT
GCTGACAGGCAGCCAACGAGTGTTAGGCACAGCTGCAGTAGAGGCGATAG
CTGGTAGGCACAGTTGAAATCCCACCCACCCTGCCCTCCTTGCACTGAGG
GGGTAGGGTACAGGTGAAAAAAGGGAGAGGGGCATTTGGAGGTGCTGGGG
TACCCAGGTGGTTCCCACTTAGCTCTTTGCCGTTTTTTCCCTTTCCCCCG
CGATTGTGCCATTACGCACGCCGCTGCCGGCAGCTAACAAAAATCATACA
TATAACTCTTACGTATTACAACGTGAAGTCCCTTTTCATGAAGAACATGC
TGACCAACACTGTTCAGATGGAACAACTTCTCATCCTGCAAGCGATGTAC
GCGTATTTTGCCGCCCGCAGGCGCAGAGGTCAATGCGCCAGCGCTCCGCG
CGCACGCCGCCGCCTGCAGGTCATTAATACCGCTCTGAAGTTGGAAGTAC
TGAAACTTCAATCCTCTCCCCCGAACTTCCATATCCTTCTTCAAACCAAC
CCCCTCAGCACCACTGTTTGACCGACACAGCCACTCATCCTGCCAGCGAC
GTGTGCTGTTTTCGCCTTTCGCAGGCGCAGAGGTTAACGCGCCAGTGCTC
CGCGCTCCGTGCGCACGCCGCCCCTGGCAACGCACGGATCACAAAACTCT
GAATTATTTTAAAAACCTCCAGTTTCTTTCCACAAAGCACGTACACGGAC
CAAGATTATTCAGACGGGATAGAACTTTGACGCTCTTGATGACATTCCCT
CACGTTTGTGGTTTCCGCTATCGCAGGTGCAGAGGTTAACGCGCCGGCGC
TCCGCGCGCACGCTGCCGCCGGCGGCTCCGTGCCGCTGCTGCGCTTTCTG
GACGAAGCCGCAGCTGCCGATGCGGAGGCTCAGGCGGTGGCAGCGGCTCA
ACTCGCAGCTGCAGTTGACGATGGCGCGGATAGCGACGACGATGACGGCA
GCGGTAAAGGTGAGTTGACTGTGAGTATCGTAAGTGTCGGTGTTGGTTGA
GCATCGCTGCAAGAGTCAGCGTCTCTTGAGCATTGCTGTCACTGTCGGTG
GTGCATCGCCATTAGCGTTGGTTTCAGTTGGGCTTGCCACGATGCGGAGG
CTCGGGCGGTGGCAGCGGCTCAGCTCGCAGCTGCAGTCGGCAATGGCGCA
GATAGCGACGACGAGGACGGCAGCGGTAAATAAAGGTCAGTTGGCCGTTT
CTATCATCAGTGTTGGCGAGCGAGTGGAGCATCGCTGTCAGAGTTAACGT
AAGCATCATTGGCAGTGTGTATGTTGAGCATCGTCCTCAGTGTCAGCTGA
GACGCTGATGCGGAGACTAAGGTCTCAGCAGCGGGTACCGACAGCGCGGG
CAGCGACGGCGATGACGGCAGCAGTCAAGGTCAAATGAGCACTGTCACCA
GCATTGTTGTTAGTGGAGCGCCGAAAAATTCAGCTCAACGAGATGCTGCT
GCACCCTGTAAGGAATGTACACGTGAATTCATGTGTCCGTCCGCAAATCA
ACTCATCCATTCCATTGTGTTCATGCCCACAACATCTGCCACCGCAGCCG
CGGCTGTTGCGGCGGGTGGCAGCGCTCAGCTCGACGAGATGCTGCTGCAA
TTTGTTTGAGTGTGTGCATGAATTCATGCATGCATCCTCAAGTCAATCCA
TTCATTCATCCGTGTTCATCACGTGCATCTGCGCCCGCAGGCGTGGCAGT
GGCAGCGGCGCTAGATGCTGCAGGACGCAGCAGCAGCGGCCATCCCCAAC
AACGCTCAGCTAGACAATATGCTTCGCCAAATCATATGCTGGCGAGGGAC
TCTCCATTCCGTGGAATCACACATTCATTCAAATTCATGCACTTCCCCGC
AGCCGCGGCAGTTGCAGCGGCGCTGGAGGCTGCGCAAGCCGCGGCAGCAG
CAGCCGTCGCCAGCAGCGCTCAGCTCAACGACATGCTGCTGCAGGCGTGC
ATTCACGGTCGCACGAATGCGGCAGCGTGGCTGCGCGCGCGCGGCGCACA
GTGGCCGGAGCGCCTGTGGACAGTGGACACGTACGGGGCGGACTACCGCT
GCTTCAGGTGGGCTGATGTTACCGTATTTGAAGTTGAAGTTGTTGGCGGA
CTACCGCTGCTTAGGTGTGCTGGTGTGTACAGTTGATCATATGTGTCAAA
GTTGAAATTTATGTTTGGAGTTTACAGGGTACCGCTGCTTCAGGTTACCG
CTGCCTCAGGTGTGGCTGACTCAGAGAGATGACGTGTAATGCTCAAAGTT
GACGTTGAAGGCTGAAGTTGAAGCGTGCATGGGTGCTGCAGCCTGGCTCC
CCACACACGACACGCAGCGGCTGTAGCGCCTGCGGACGGTATGCATGTAT
GGGGCGGATTACAGCTGCTTCAGGTTGGCTGCTCAGAGATGGTTTTGTCG
GGTTTGAGTTTTCAAGATGTAGAACTTAAAGTTGAATTGATCTTAGAGGC
TAAATTTGAAACTGAAGTTTGGGCATGGCTGCGCTGCGCGCGCTGCGGCG
CGCAGTGGCCAGTGCGCTGTTGACTGTTCATATGTGCGGGGCAGACCACC
GCACTTCAGGTATGGTGTCGGCGGGGACGGTGTTTTCCTTCCGTCTGTTT
TCACGCAGTCATGGCATGAAGTTGACGATTCCAGAGCTTGTATGGTGGAA
GCAGGTAAATCTGCGTTCTTGCAGTTCTGCACATGTAAGGCTGCCATGGT
GGATTGTGGATGGCAAGGTCTGGTGCATCCATATGTTTCCCCACCCTGTG
CGATGCGGTTCTCCACAAACAGAGAAGCACTGGGGTGTGGTGTGATTCAC
AGATTCGTTGTGTATATTGAATAATGCCCCAAGTCAGCGGCTGCAGCATC
GAAGGACATTCAGCGTGAGAGGTGACACTGTACAGCTTGCTGTGCGTCAC
AGCTTTGGGCGAGATTAAAGTTGCCGGCGCCGCTGTTGATTTGCGCCTTG
TGCCTGGTGTGACATAATTGAACTTGCAGGTGCCGCTGCTGAGCTGTGCA
CTGTGGCGTGCAGTGCCCTTCGTGACAGCCTGCATGCAGAAGTGACAATG
ACCACAGAGGTCTACCCGGCCTGAATTCAACCCGAAGTGCCTTCAAAGTA
TTCAATCTCATGAGTCCGTGCCATAGCCTTTTGCCGAGTGCAGCCACATA
ACAAATGGCCATTGCTTTGGGGTGCCCCTGGGGGCATAACAAGCAGGCCA
GTTCCAGAGCTTGAGTCCACAGGCACCGCCTACCAATGCCAGAGCTTCTT
GACAGCGCGCAATAAATTCGTCAAGAGATTGTCACAAACTAATGGCCTGA
CCCCTATCCTCGCCTCTCGCAGACTGCAGACGCTCAAGTGGGCCATCGCC
GAGGGGTGCCCCTGGGGCCCCTGGCCAGCAGGCCTGTGCCAGAGCCTGCG
CAAGTGGGGGCACAGCTCAGAAGTGGATTGGGCACACAACCACGGTGCCC
CCTGCCCCTGTCCCGAACGAGGAGGAGGGGGGGCGGAAGGGGGGAGGGGG
CGTGCGGTGCCGCTGCCGTCGCGGTTGCTAGCGCTTGA

Coding sequence (CDS) from alignment at Contig_34:987578..997365-

>mRNA_8332 ID=mRNA_8332|Name=jgi.p|Trimin1|349039|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1476bp|location=Sequence derived from alignment at Contig_34:987578..997365- (Tribonema minus UTEX_B_3156 )
ATGACACCACAGCGCTATGCTCAGAGGGAGGCGGCGCTCGAATTCGTCTT
GCGGCTGGTTCCTGGACAGTGGCTGTACGCAGCTGCCGTGTGCAGGCAGT
GGCGAAACCTGTACTCGGAGGTGTTCAGTGACACCTGCACCTATTACACC
TCAGCTGCGAGCTCCAGCCAGTGTCTGCAGTACGCCTTCGAGAGCGGCCT
GAAGTTGGCGGAGAGAGATTTTCATCGCGCTGCGGGCAGCCACGGCAGCA
TAGACACGATACAGCTGGCGCGGAGCCTGGGCATGCGGTGGTCGCCGGAC
CTGTGCACTGGAGCTGCCAGGACAGGGCGCGTGGAGCTGCTGCGCTGGCT
GCGGGCGCAGGGGTGCCCGTGGAACGAGAGCATGGCGTGCCCGTGGACCG
AGAGCGTGGCTGGCGCCGCCGACGCCCTCACACAAGAACTCCGCCGGGAG
CTCGACTTCTACATCAGCACGGGGCCGGCCGGGGCCGGGGCCGGCCCCGT
GCCTGGGGCCGTGCCGGCGGCGGTCCTGCCGCTGTACGCCGCAGGCGCGC
GCCTCTTGCACGCGCGCCCTGAGATTCGCGCCGTCAACGGCAGCAGTGTG
AAGCGGGCCTGGGGGTACAGCGTGGCAATGGTGGCTGCAGCTAGAGGCGA
CATAGCGGTGCTGCAGTGGGTGTGGACGACCTCCCCTTGGACGGCAAACT
CGTACTACATCTGCAATGCGGCTGCCAGGCATGGTCAGCTCGCTGCGCTC
CAGTGGATGCTGCGGCGGGGATGCCTCTGGGACGTGTTCAAGGGCGATCT
GGTGACAGAAGCAGCGCGAAACGGCCACCTAAACATGTTGAAGTGGCTCA
GGGCGATGGGCTTCAAGTTTGGGGCGCGAACGGTGCAGCTGGCGGTGCGC
GGCGGGCACTTCGAAACCGTCAAGTGGCTGCACAAAGAAGGTGCAGAGGT
TAACGCGCCGGCGCTCCGCGCGCACGCTGCCGCCGGCGGCTCCGTGCCGC
TGCTGCGCTTTCTGGACGAAGCCGCAGCTGCCGATGCGGAGGCTCAGGCG
GTGGCAGCGGCTCAACTCGCAGCTGCAGTTGACGATGGCGCGGATAGCGA
CGACGATGACGGCAGCGGTAAAGCCGCGGCAGTTGCAGCGGCGCTGGAGG
CTGCGCAAGCCGCGGCAGCAGCAGCCGTCGCCAGCAGCGCTCAGCTCAAC
GACATGCTGCTGCAGGCGTGCATTCACGGTCGCACGAATGCGGCAGCGTG
GCTGCGCGCGCGCGGCGCACAGTGGCCGGAGCGCCTGTGGACAGTGGACA
CGTACGGGGCGGACTACCGCTGCTTCAGACTGCAGACGCTCAAGTGGGCC
ATCGCCGAGGGGTGCCCCTGGGGCCCCTGGCCAGCAGGCCTGTGCCAGAG
CCTGCGCAAGAGGAGGGGGGGCGGAAGGGGGGAGGGGGCGTGCGGTGCCG
CTGCCGTCGCGGTTGCTAGCGCTTGA