Trimin1|349039|estExt_Genemark1.C_Ctg_340093 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349039
Unique NameTrimin1|349039|estExt_Genemark1.C_Ctg_340093
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length492
Homology
[Close]
BLAST of jgi.p|Trimin1|349039 vs. uniprot
Match: A0A835YWU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWU0_9STRA)

HSP 1 Score: 787 bits (2033), Expect = 1.720e-284
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0 
Query:    1 MTPQRYAQREAALEFVLRLVPGQWLYAAAVCRQWRNLYSEVFSDTCTYYTSAASSSQCLQYAFESGLKLAERDFHRAAGSHGSIDTIQLARSLGMRWSPDLCTGAARTGRVELLRWLRAQGCPXXXXXXXXXXXXVAGAADALTQELRRELDFYISTGPAGAGAGPVPGAVPAAVLPLYAAGARLLHARPEIRAVNGSSVKRAWGYSVAMVAAARGDIAVLQWVWTTSPWTANSYYICXXXXXXXXXXXXXXMLRRGCLWDVFKGDLVTEAARNGHLNMLKWLRAMGFKFGARTVQLAXXXXXXXXXXXXXXXGAEVNAPALRAHAAAGGSVPLLRFLDEAAAADAEAQAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAQLNDMLLQACIHGRTNAAAWLRARGAQWPERLWTVDTYGADYRCFRLQTLKWAIAEGCPWGPWPAGLCQSLRKRRGGGRGEGACGAAAVAVASA 491
            MTPQRYAQREAALEFVLRLVPGQWLYAAAVCRQWRNLYSEVFSDTCTYYTSAASSSQCLQYAFESGLKLAERDFHRAAGSHGSIDTIQLARSLGMRWSPDLCTGAARTGRVELLRWLRAQGCPXXXXXXXXXXXXVAGAADALTQELRRELDFYISTGPAGAGAGPVPGAVPAAVLPLYAAGARLLHARPEIRAVNGSSVKRAWGYSVAMVAAARGDIAVLQWVWTTSPWTANSYYICXXXXXXXXXXXXXXMLRRGCLWDVFKGDLVTEAARNGHLNMLKWLRAMGFKFGARTVQLAXXXXXXXXXXXXXXXGAEVNAPALRAHAAAGGSVPLLRFLDEAAAADAEAQAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAQLNDMLLQACIHGRTNAAAWLRARGAQWPERLWTVDTYGADYRCFRLQTLKWAIAEGCPWGPWPAGLCQSLRKRRGGGRGEGACGAAAVAVASA
Sbjct:    1 MTPQRYAQREAALEFVLRLVPGQWLYAAAVCRQWRNLYSEVFSDTCTYYTSAASSSQCLQYAFESGLKLAERDFHRAAGSHGSIDTIQLARSLGMRWSPDLCTGAARTGRVELLRWLRAQGCPXXXXXXXXXXXXVAGAADALTQELRRELDFYISTGPAGAGAGPVPGAVPAAVLPLYAAGARLLHARPEIRAVNGSSVKRAWGYSVAMVAAARGDIAVLQWVWTTSPWTANSYYICXXXXXXXXXXXXXXMLRRGCLWDVFKGDLVTEAARNGHLNMLKWLRAMGFKFGARTVQLAXXXXXXXXXXXXXXXGAEVNAPALRAHAAAGGSVPLLRFLDEAAAADAEAQAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAQLNDMLLQACIHGRTNAAAWLRARGAQWPERLWTVDTYGADYRCFRLQTLKWAIAEGCPWGPWPAGLCQSLRKRRGGGRGEGACGAAAVAVASA 491
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349039 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YWU0_9STRA1.720e-284100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 35..437
e-value: 1.1E-13
score: 52.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 105..424
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 34..343

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_34contigContig_34:987578..997365 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349039mRNA_8332Tribonema minus UTEX_B_3156 mRNAContig_34 987578..997365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349039|estExt_Genemark1.C_Ctg_340093 ID=Trimin1|349039|estExt_Genemark1.C_Ctg_340093|Name=jgi.p|Trimin1|349039|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=492bp
MTPQRYAQREAALEFVLRLVPGQWLYAAAVCRQWRNLYSEVFSDTCTYYT
SAASSSQCLQYAFESGLKLAERDFHRAAGSHGSIDTIQLARSLGMRWSPD
LCTGAARTGRVELLRWLRAQGCPWNESMACPWTESVAGAADALTQELRRE
LDFYISTGPAGAGAGPVPGAVPAAVLPLYAAGARLLHARPEIRAVNGSSV
KRAWGYSVAMVAAARGDIAVLQWVWTTSPWTANSYYICNAAARHGQLAAL
QWMLRRGCLWDVFKGDLVTEAARNGHLNMLKWLRAMGFKFGARTVQLAVR
GGHFETVKWLHKEGAEVNAPALRAHAAAGGSVPLLRFLDEAAAADAEAQA
VAAAQLAAAVDDGADSDDDDGSGKAAAVAAALEAAQAAAAAAVASSAQLN
DMLLQACIHGRTNAAAWLRARGAQWPERLWTVDTYGADYRCFRLQTLKWA
IAEGCPWGPWPAGLCQSLRKRRGGGRGEGACGAAAVAVASA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf