mRNA_5936 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348942
Unique Name	mRNA_5936
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348942 vs. uniprot
Match: A0A836CDA5_9STRA (KH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDA5_9STRA)

HSP 1 Score: 735 bits (1898), Expect = 5.540e-262
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 1

Query:    1 MQQGGEPAXXXXXXXXXXXXXQXHKRVNKKKKAPVVSTGPNAGDSPAVSQDPAVQQHQSSAAPINGAKQXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXRRTDDAGGSHRQTDRSPSSEPSDGGAGGLGGVQNSAPHATVGADLPSVGDVSNVEGLFMEAVDIPAVLNEWAREGNAAFVGVLAAVKRQTEVQCLQTRVVAAPLTGPQRKQLVVAAAEAALARAAAMLLTTHVRCQAALLALERRASAERREVHVAYQVEVEKGLRVSFNATTXXXXXXXXXXXXVPEAFVGLLIGKQGNRINAAMEKTGCNIHVEDGGIVTVIGPSAEAVAAARESMDFEQAAVTITPAQLASLSNVRIGELRDNAGCSAISVDDHCDPPKVMLLGTRSAVAAAREMLDTLFLCAEPQQKLQRQQSVFAARMASLXXXXXXXXXXXXXXXXXXXXXXXXXXGGFKPAGGXXXXXXXXXXXXXXXXXGRGGYQRAQMSQTPVLLQRPTGAAAGQQLGRXXXXXXXXXXXXXXXXXXXXXXXXXXGRGANMAGRRRK 1653
            MQQGGEPAXXXXXXXXXXXXXQXHKRVNKKKKAPVVSTGPNAGDSPAVSQDPAVQQHQSSAAPINGAKQXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXRRTDDAGGSHRQTDRSPSSEPSDGGAGGLGGVQNSAPHATVGADLPSVGDVSNVEGLFMEAVDIPAVLNEWAREGNAAFVGVLAAVKRQTEVQCLQTRVVAAPLTGPQRKQLVVAAAEAALARAAAMLLTTHVRCQAALLALERRASAERREVHVAYQVEVEKGLRVSFNATTXXXXXXXXXXXXVPEAFVGLLIGKQGNRINAAMEKTGCNIHVEDGGIVTVIGPSAEAVAAARESMDFEQAAVTITPAQLASLSNVRIGELRDNAGCSAISVDDHCDPPKVMLLGTRSAVAAAREMLDTLFLCAEPQQKLQRQQSVFAARMASLXXXXXXXXXXXXXXXXXXXXXXXXXXGGFKPAGGXXXXXXXXXXXXXXXXXGRGGYQRAQMSQTPVLLQRPTGAAAGQQLGRXXXXXXXXXXXXXXXXXXXXXXXXXXGRGANMAGRRRK
Sbjct:    1 MQQGGEPAXXXXXXXXXXXXXQXHKRVNKKKKAPVVSTGPNAGDSPAVSQDPAVQQHQSSAAPINGAKQXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXRRTDDAGGSHRQTDRSPSSEPSDGGAGGLGGVQNSAPHATVGADLPSVGDVSNVEGLFMEAVDIPAVLNEWAREGNAAFVGVLAAVKRQTEVQCLQTRVVAAPLTGPQRKQLVVAAAEAALARAAAMLLTTHVRCQAALLALERRASAERREVHVAYQVEVEKGLRVSFNATTXXXXXXXXXXXXVPEAFVGLLIGKQGNRINAAMEKTGCNIHVEDGGIVTVIGPSAEAVAAARESMDFEQAAVTITPAQLASLSNVRIGELRDNAGCSAISVDDHCDPPKVMLLGTRSAVAAAREMLDTLFLCAEPQQKLQRQQSVFAARMASLXXXXXXXXXXXXXXXXXXXXXXXXXXGGFKPAGGXXXXXXXXXXXXXXXXXGRGGYQRAQMSQTPVLLQRPTGAAAGQQLGRXXXXXXXXXXXXXXXXXXXXXXXXXXGRGANMAGRRRK 551

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BLAST of jgi.p|Trimin1|348942 vs. uniprot
Match: A0A7S3BPL6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BPL6_9EUKA)

HSP 1 Score: 62.0 bits (149), Expect = 1.840e-6
Identity = 64/205 (31.22%), Postives = 103/205 (50.24%), Query Frame = 1

Query:  628 TGPQRKQLVVAAAEAALARAAAMLLTTHVRCQAALLALERRASAERREVHVAYQVEVEK---GLRVSFNATTXXXXXXXXXXXXVPEAFVGLLIGKQGNRINAAMEKTGCN-IHVEDGGI-VTVIGPSAEAVAAARESMDFEQAAVTITPAQLASL---SNVRIGELRDNAGCSAISVDDHCDPPKVMLLGTRSAVAAAREMLDT 1218
            T P+  QL +  +E ++A+A  MLL  H++ Q+ +     R S ER  +    + E EK   G RV F  T                  +GL++GK G  I    + TG + + V+  G  V +IGP+ EAV AARE ++F    V + P Q+  L   +     +L++    + ++VD   +  +V+L+GT+SAV AA+  +DT
Sbjct:  166 TSPKIAQLRLIGSEKSIAKAK-MLLELHIKHQSEM----HRISNERSMLSTKLEAEREKLSSGYRVEFPITRDV---------------IGLVVGKSGKNIVDTQKATGVDRVEVDPSGPRVVIIGPTQEAVDAARELLEFVTVRVDVKPEQVGWLIGRAGKTFKDLQEKTKVTRLNVDKTMN--QVVLVGTKSAVEAAQLYMDT 348

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348942 vs. uniprot

BLAST of jgi.p|Trimin1|348942 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CDA5_9STRA	5.540e-262	100.00	KH domain-containing protein n=1 Tax=Tribonema min...	[more]
A0A7S3BPL6_9EUKA	1.840e-6	31.22	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_33	contig	Contig_33:324200..328672 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348942\|estExt_Genemark1.C_Ctg_330048
Hectar predicted targeting category	other localisation
Ec32 ortholog description	K Homology domain, type 1
Ec32 ortholog	Ec-16_002550.1
TranscriptId	349264
Track	FilteredModels1
ProteinId	348942

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348942	gene_5936	Tribonema minus UTEX_B_3156	gene	Contig_33 324200..328672 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348942	Trimin1\|348942\|estExt_Genemark1.C_Ctg_330048	Tribonema minus UTEX_B_3156	polypeptide	Contig_33 324200..328672 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5936_1	exon_5936_1	Tribonema minus UTEX_B_3156	exon	Contig_33 324200..324781 +
exon_5936_2	exon_5936_2	Tribonema minus UTEX_B_3156	exon	Contig_33 325374..325615 +
exon_5936_3	exon_5936_3	Tribonema minus UTEX_B_3156	exon	Contig_33 325704..325748 +
exon_5936_4	exon_5936_4	Tribonema minus UTEX_B_3156	exon	Contig_33 327073..327275 +
exon_5936_5	exon_5936_5	Tribonema minus UTEX_B_3156	exon	Contig_33 328089..328672 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5936	CDS_5936	Tribonema minus UTEX_B_3156	CDS	Contig_33 324200..324781 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_33:324200..328672+
coding sequence from alignment at Contig_33:324200..328672+

spliced messenger RNA

>mRNA_5936 ID=mRNA_5936|Name=jgi.p|Trimin1|348942|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1656bp|location=Sequence derived from alignment at Contig_33:324200..328672+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCAGGGCGGCGAGCCTGCAGCAGCAGCTAACGGAGGAGGAGCAGG
CGCGCAAAAACTCCAGCAGCACAAGCGCGTCAACAAGAAGAAGAAAGCTC
CCGTCGTCTCAACTGGACCAAACGCTGGCGACAGCCCGGCTGTCTCCCAG
GATCCAGCCGTGCAGCAGCATCAGTCATCGGCAGCCCCTATTAATGGTGC
GAAGCAGCAGCAGCAGCAGCAATATCAACAACAGCACGTCCAGGTAGCGA
AGAAGGCTTCTCCGCAGCACCAACACAAGCCGCAGCAGAAGCCGAGGCAG
CATCTGCAGCAGCAGCGTCGGACCGACGATGCCGGCGGCAGCCACCGACA
GACGGATAGATCGCCCTCTTCTGAGCCCTCAGACGGAGGCGCAGGAGGCC
TAGGAGGCGTCCAAAACTCTGCTCCTCATGCTACCGTGGGCGCGGACCTG
CCGAGCGTCGGGGATGTCAGCAATGTTGAGGGGCTCTTCATGGAGGCAGT
TGACATCCCTGCTGTGCTCAATGAGTGGGCCCGCGAGGGCAACGCGGCGT
TTGTGGGTGTGCTGGCCGCCGTCAAGCGGCAGACGGAGGTGCAGTGCCTG
CAGACGCGCGTGGTCGCGGCGCCGCTGACCGGCCCGCAGCGCAAGCAGTT
GGTTGTGGCGGCGGCGGAGGCGGCGCTGGCGCGCGCGGCGGCGATGCTGC
TGACGACGCACGTGAGGTGTCAGGCGGCGCTGCTGGCACTGGAGCGGCGT
GCGTCTGCGGAGCGCAGGGAGGTGCACGTGGCGTATCAGGTGGAGGTGGA
GAAGGGGCTGCGCGTGTCCTTCAATGCAACGACAGTGGAGGTGGAGAAGG
GGCTGCGCGTGTCCTTCAACGTCCCAGAAGCCTTTGTGGGACTGCTGATA
GGCAAGCAGGGCAACCGCATCAATGCCGCCATGGAGAAAACGGGCTGCAA
CATACACGTGGAGGACGGCGGAATCGTAACTGTCATTGGGCCGAGCGCTG
AGGCAGTGGCAGCAGCGCGCGAGTCCATGGACTTTGAGCAGGCGGCGGTG
ACCATCACGCCCGCGCAGCTCGCGTCGCTGTCAAACGTGCGCATCGGCGA
GCTGCGCGACAACGCGGGCTGCAGCGCCATCTCCGTGGACGACCACTGCG
ACCCTCCCAAGGTCATGCTGCTCGGCACGCGCTCCGCCGTCGCGGCCGCG
CGCGAGATGCTCGACACGCTGTTCCTCTGCGCGGAGCCGCAGCAGAAGCT
GCAGCGCCAGCAGAGTGTCTTCGCGGCGCGCATGGCGTCGCTGCTGCAGC
AGCAGCAGCAGCAGCGCTCGCTGGCGGGGCGGGGGGCGGGGGCGGCGGGC
GGCAGCGCTGCCGCTGCTGCGGGCGGGTTCAAGCCTGCCGGCGGCGCTGC
TGCTGCGGGCGGTTTCAAGCCTGCCGGCGCGGGGGGGGAGGGGGGGGGGC
GGGGCGGATATCAACGCGCGCAGATGTCGCAGACGCCGGTGCTGCTGCAG
CGGCCTACGGGCGCGGCGGCAGGGCAGCAGCTGGGGCGGCAGCAGCAGCA
GCACGAGCAGCAGCAGCACCGCGGCGCGCCGGCGGCAGCGGCGTATGATG
GCGGCGGCGGCAGCGGGGGCAGGGGGGCAAACATGGCGGGGCGCAGGCGG
AAGTAG

protein sequence of jgi.p|Trimin1|348942

>Trimin1|348942|estExt_Genemark1.C_Ctg_330048 ID=Trimin1|348942|estExt_Genemark1.C_Ctg_330048|Name=jgi.p|Trimin1|348942|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=552bp
MQQGGEPAAAANGGGAGAQKLQQHKRVNKKKKAPVVSTGPNAGDSPAVSQ
DPAVQQHQSSAAPINGAKQQQQQQYQQQHVQVAKKASPQHQHKPQQKPRQ
HLQQQRRTDDAGGSHRQTDRSPSSEPSDGGAGGLGGVQNSAPHATVGADL
PSVGDVSNVEGLFMEAVDIPAVLNEWAREGNAAFVGVLAAVKRQTEVQCL
QTRVVAAPLTGPQRKQLVVAAAEAALARAAAMLLTTHVRCQAALLALERR
ASAERREVHVAYQVEVEKGLRVSFNATTVEVEKGLRVSFNVPEAFVGLLI
GKQGNRINAAMEKTGCNIHVEDGGIVTVIGPSAEAVAAARESMDFEQAAV
TITPAQLASLSNVRIGELRDNAGCSAISVDDHCDPPKVMLLGTRSAVAAA
REMLDTLFLCAEPQQKLQRQQSVFAARMASLLQQQQQQRSLAGRGAGAAG
GSAAAAAGGFKPAGGAAAAGGFKPAGAGGEGGGRGGYQRAQMSQTPVLLQ
RPTGAAAGQQLGRQQQQHEQQQHRGAPAAAAYDGGGGSGGRGANMAGRRR
K*

mRNA from alignment at Contig_33:324200..328672+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5936 ID=mRNA_5936|Name=jgi.p|Trimin1|348942|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4473bp|location=Sequence derived from alignment at Contig_33:324200..328672+ (Tribonema minus UTEX_B_3156 )
ATGCAGCAGGGCGGCGAGCCTGCAGCAGCAGCTAACGGAGGAGGAGCAGG
CGCGCAAAAACTCCAGCAGCACAAGCGCGTCAACAAGAAGAAGAAAGCTC
CCGTCGTCTCAACTGGACCAAACGCTGGCGACAGCCCGGCTGTCTCCCAG
GATCCAGCCGTGCAGCAGCATCAGTCATCGGCAGCCCCTATTAATGGTGC
GAAGCAGCAGCAGCAGCAGCAATATCAACAACAGCACGTCCAGGTAGCGA
AGAAGGCTTCTCCGCAGCACCAACACAAGCCGCAGCAGAAGCCGAGGCAG
CATCTGCAGCAGCAGCGTCGGACCGACGATGCCGGCGGCAGCCACCGACA
GACGGATAGATCGCCCTCTTCTGAGCCCTCAGACGGAGGCGCAGGAGGCC
TAGGAGGCGTCCAAAACTCTGCTCCTCATGCTACCGTGGGCGCGGACCTG
CCGAGCGTCGGGGATGTCAGCAATGTTGAGGGGCTCTTCATGGAGGCAGT
TGACATCCCTGCTGTGCTCAATGAGTGGGCCCGCGAGGGCAACGCGGCGT
TTGTGGGTGTGCTGGCCGCCGTCAAGCGGCAGGTGAGACCACTCAATAAT
GTGATGCTGTCTGCGACAAGAAAGTGATGGTGAAGCTGTACGCCGATGCG
TCACATGGGGCTGTTGGTCAGGAGGAGTCCTATTGCCATCACTACACCGC
TTCCTATGCCTGGCACAAAATCTGACTGTCTTCAACTCAACTGGTAAGGC
TTGTGCGTTTAGAGCAATGTGCGGCTTTGTCAGCAGTAGTTGCGTACTGT
ATCTGGCCCTGACGCTAAGGCTTTGTAGCAGGGCGCAGCTGCCTGATAAT
GCAGTTCAGCCTTTATCCTTCCTCTGCGTGGACCAAAGACGTGCATTTTC
CGGGGGACGCTCCAAGCAAGGTCCTTGCAGCGCTGGTGTGTTCACAGCAG
TGCCGCCATGCATACTGAAAGTCAGGGCGCGACACACATTGAGAGCAGCT
GTGACACTGCGGACACTCGTGAAATGATTTCATTGGCGCCATGCAGCGTC
GCCGCAACAGAACTGCCCTCTCGCTGCATCAACCATCATGGCAGCCACCT
TTATCGGCGATGCCGTTGTGGCCTCATCATCACACTGTAAAACCATCACA
CAAATGCCCATTTTGTGTCTGCAGACGGAGGTGCAGTGCCTGCAGACGCG
CGTGGTCGCGGCGCCGCTGACCGGCCCGCAGCGCAAGCAGTTGGTTGTGG
CGGCGGCGGAGGCGGCGCTGGCGCGCGCGGCGGCGATGCTGCTGACGACG
CACGTGAGGTGTCAGGCGGCGCTGCTGGCACTGGAGCGGCGTGCGTCTGC
GGAGCGCAGGGAGGTGCACGTGGCGTATCAGGTGGAGGTGGAGAAGGGGC
TGCGCGTGTCCTTCAAGTGAGTGCACTTAAGTGAATACAGTAGCTGGAGT
TGAAGTGGAAAGATGGAGTCGAAGTGCAGAGAAAGCTAACCGTTACACTT
GCAGTGCAACGACAGTGGAGGTGGAGAAGGGGCTGCGCGTGTCCTTCAAG
TGAGTGTACGCGAGGGGGAAAGCTGCAGTTGAAGTGCAGGGCAGCAGTTA
TAGTTGCAGTGAAGAGACGGCGGAGGTGGAGAAGGGGCTGTGCGTGTCCT
TCAAGTGAGTGTACTTTTTATCAATTCTCGCTCAGGGCGCGAAAAAGCCC
TTGAAGTGAAAGGATGGAGTTGAAGTGCAGAGAAGCAGTTACAGTTGCAG
TGGAAAGAGTGGGAGTTGGAGAAGGAGCTGCGCGTGTTGTACAAGTGCAT
CGACAGTGTACTTGAAGTGGAGGGACGGAGTTGCAGTGCAGAGGAAGCAG
AGTAGCGGCAGTGGAAAGACAGACATGAGAGGGAGAAAGCAGAGTCCTTT
GAAGTGGGAAGAAACAGAGTCAAAGCGTGATGGTGTGACTGCCGTAGATG
AAGGCTTGTGCCCAGTGCAAGAGCAACTGGCGGAAGTGGCATTGAGAACC
TCAGAGCAGCCACGAAGTTGGGCAAGGCTACGCTGCCTGCGTGAGTGTTT
GTCTTGACGAAGCAGCAAAGTAGTTGAAGTTGAAGTGCTGTAGACTGGTG
CTACTGCTCAGCTGGCGCAAGGTTGGCGGGTGTCAGGAATAATGACCCAG
GTCTACTCAGCAGGCGATGCTGCCTGCTTCGCAGAATTGCAGGCATCTTT
CTCGTGAGGTGACGGTTGCAACAGACCCTGCTGCTACGGTCTTGCGACAG
GGGATACATTAGCGTCAAAGTCGCAAAGGCACCAAATATCTTGGCTGCGC
CATGCAGCAGTGCTTGGTGCTTTGTAATTGATTGGCACACGAGTATGTTG
TGCATGTTTGAGATCTGTCATAAGCAAGCTGCAACGCTATGTGTGCAAAG
AGAATAACCTGTTCCGTGCCATGCCATTTACGGCTACATGATTAGCAGTT
ACATAGTCAGCAGACACACGCGCATGTTACTGCGGAATGGGTTGGCGCAC
ATGATCAATTGGTCCTTGTTAAAACAACTTTAACTGAGTATCAAAGAAGC
TCAAGTTCATATCAGACTGTATTTGCGTTCAGGCAGTGGCAGTGGGTGCG
ATGCTGCTCCAATTTATTGGCAGTGCCGGCATGTTTGACCTGAATCTGTG
GCATATACTTCATGTACTTGAAGTATGCATGGTTTGCCTCCGGGATGCGC
TGTAACCGAGGTGGTAGCCTCTGTCATCAACACAGGTAGTGACCACGGTC
ATCAATCCCAGGCATTACTTCAAATTGTCATTATTGCAACTTCAACAGTT
GTGACGCTCCCAAATAGCTGCATTACTAACTCAGCTCTTCTGGCGCCGTG
TTCTCCTTATTTACAATCCGCAGCGTCCCAGAAGCCTTTGTGGGACTGCT
GATAGGCAAGCAGGGCAACCGCATCAATGCCGCCATGGAGAAAACGGGCT
GCAACATACACGTGGAGGACGGCGGAATCGTAACTGTCATTGGGCCGAGC
GCTGAGGCAGTGGCAGCAGCGCGCGAGTCCATGGACTTTGAGCAGGCGGC
GGTGACCATCACGCCCGCGCAGCTCGGTGAGTCACCAATTGAAGTTACGG
TATATCTGCAGCTCGGTGAGTCGCCGATTGAAGTTACAGTTTGATTATCG
CTTGATCAGCATGCAGGTGAGGCTTTCGTCAGTAGGTCAGCAACACTTAC
TTTGCGGCAGTACAATCGGTTGAACTTTGAGCAGGCCCAGTGATACGCCT
GCGCAGCTCGGTGAGTCGCCACTTGAAGTCTCAGTATTCAGAAGCCAAGT
CATCCCCCCTTCCCAGCATCAGTATTTCCTCAGCGACAGAGTACGCGGAT
GCTTGAGCTTTAGAGCGCACATGTGGCGTCGCCTTGGCGCACGTGCTCAG
CTTACTACACTCGCATTTACACATGGCTCAGCAAGTCTTTGTGCCACCTG
CATGCAGCCTAGGTAATACTGGCACACCATGCGCAAGTGACCGTGTTTCA
TTCGCAGTTCAAATCGCAGACCACGGCACCAACTGTAAACTATCTGGAGC
ACACTCTGGAGTCAACACAAACAGCACCCGTAACTTCAGTGTGAGACGCG
ACCTATCCCCATCCTGCAATGTTCAATGTCTTTGAACGACGCTGCACCAT
CACTATCGCCACGCTCCCTTGCGACCGCCCGCAGCGTCGCTGTCGAATGT
GTGACGCACGACCTACACGCAGCCTGCAATATTTCATAACCCTGCACCCT
CACTGCTGCGCCCCCCTCGCGACCGCCCGCAGCGTCGCTGTCGAACGTGC
GCATCGGCGAGCTACACGCACGGTGCAATGTTCTATGTCGCTCAACAACC
CTGCACCCTCACTGCTGCACCCCCTCGCGACCGCCGCAGCGTCGCTGTCA
AACGTGCGCATCGGCGAGCTGCGCGACAACGCGGGCTGCAGCGCCATCTC
CGTGGACGACCACTGCGACCCTCCCAAGGTCATGCTGCTCGGCACGCGCT
CCGCCGTCGCGGCCGCGCGCGAGATGCTCGACACGCTGTTCCTCTGCGCG
GAGCCGCAGCAGAAGCTGCAGCGCCAGCAGAGTGTCTTCGCGGCGCGCAT
GGCGTCGCTGCTGCAGCAGCAGCAGCAGCAGCGCTCGCTGGCGGGGCGGG
GGGCGGGGGCGGCGGGCGGCAGCGCTGCCGCTGCTGCGGGCGGGTTCAAG
CCTGCCGGCGGCGCTGCTGCTGCGGGCGGTTTCAAGCCTGCCGGCGCGGG
GGGGGAGGGGGGGGGGCGGGGCGGATATCAACGCGCGCAGATGTCGCAGA
CGCCGGTGCTGCTGCAGCGGCCTACGGGCGCGGCGGCAGGGCAGCAGCTG
GGGCGGCAGCAGCAGCAGCACGAGCAGCAGCAGCACCGCGGCGCGCCGGC
GGCAGCGGCGTATGATGGCGGCGGCGGCAGCGGGGGCAGGGGGGCAAACA
TGGCGGGGCGCAGGCGGAAGTAG

Coding sequence (CDS) from alignment at Contig_33:324200..328672+

>mRNA_5936 ID=mRNA_5936|Name=jgi.p|Trimin1|348942|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1656bp|location=Sequence derived from alignment at Contig_33:324200..328672+ (Tribonema minus UTEX_B_3156 )
ATGCAGCAGGGCGGCGAGCCTGCAGCAGCAGCTAACGGAGGAGGAGCAGG
CGCGCAAAAACTCCAGCAGCACAAGCGCGTCAACAAGAAGAAGAAAGCTC
CCGTCGTCTCAACTGGACCAAACGCTGGCGACAGCCCGGCTGTCTCCCAG
GATCCAGCCGTGCAGCAGCATCAGTCATCGGCAGCCCCTATTAATGGTGC
GAAGCAGCAGCAGCAGCAGCAATATCAACAACAGCACGTCCAGGTAGCGA
AGAAGGCTTCTCCGCAGCACCAACACAAGCCGCAGCAGAAGCCGAGGCAG
CATCTGCAGCAGCAGCGTCGGACCGACGATGCCGGCGGCAGCCACCGACA
GACGGATAGATCGCCCTCTTCTGAGCCCTCAGACGGAGGCGCAGGAGGCC
TAGGAGGCGTCCAAAACTCTGCTCCTCATGCTACCGTGGGCGCGGACCTG
CCGAGCGTCGGGGATGTCAGCAATGTTGAGGGGCTCTTCATGGAGGCAGT
TGACATCCCTGCTGTGCTCAATGAGTGGGCCCGCGAGGGCAACGCGGCGT
TTGTGGGTGTGCTGGCCGCCGTCAAGCGGCAGACGGAGGTGCAGTGCCTG
CAGACGCGCGTGGTCGCGGCGCCGCTGACCGGCCCGCAGCGCAAGCAGTT
GGTTGTGGCGGCGGCGGAGGCGGCGCTGGCGCGCGCGGCGGCGATGCTGC
TGACGACGCACGTGAGGTGTCAGGCGGCGCTGCTGGCACTGGAGCGGCGT
GCGTCTGCGGAGCGCAGGGAGGTGCACGTGGCGTATCAGGTGGAGGTGGA
GAAGGGGCTGCGCGTGTCCTTCAATGCAACGACAGTGGAGGTGGAGAAGG
GGCTGCGCGTGTCCTTCAACGTCCCAGAAGCCTTTGTGGGACTGCTGATA
GGCAAGCAGGGCAACCGCATCAATGCCGCCATGGAGAAAACGGGCTGCAA
CATACACGTGGAGGACGGCGGAATCGTAACTGTCATTGGGCCGAGCGCTG
AGGCAGTGGCAGCAGCGCGCGAGTCCATGGACTTTGAGCAGGCGGCGGTG
ACCATCACGCCCGCGCAGCTCGCGTCGCTGTCAAACGTGCGCATCGGCGA
GCTGCGCGACAACGCGGGCTGCAGCGCCATCTCCGTGGACGACCACTGCG
ACCCTCCCAAGGTCATGCTGCTCGGCACGCGCTCCGCCGTCGCGGCCGCG
CGCGAGATGCTCGACACGCTGTTCCTCTGCGCGGAGCCGCAGCAGAAGCT
GCAGCGCCAGCAGAGTGTCTTCGCGGCGCGCATGGCGTCGCTGCTGCAGC
AGCAGCAGCAGCAGCGCTCGCTGGCGGGGCGGGGGGCGGGGGCGGCGGGC
GGCAGCGCTGCCGCTGCTGCGGGCGGGTTCAAGCCTGCCGGCGGCGCTGC
TGCTGCGGGCGGTTTCAAGCCTGCCGGCGCGGGGGGGGAGGGGGGGGGGC
GGGGCGGATATCAACGCGCGCAGATGTCGCAGACGCCGGTGCTGCTGCAG
CGGCCTACGGGCGCGGCGGCAGGGCAGCAGCTGGGGCGGCAGCAGCAGCA
GCACGAGCAGCAGCAGCACCGCGGCGCGCCGGCGGCAGCGGCGTATGATG
GCGGCGGCGGCAGCGGGGGCAGGGGGGCAAACATGGCGGGGCGCAGGCGG
AAGTAG