Trimin1|352075|estExt_Genemark1.C_Ctg_1070063 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352075
Unique NameTrimin1|352075|estExt_Genemark1.C_Ctg_1070063
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length225
Homology
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A835ZFL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL1_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 3.950e-140
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
Query:    1 MKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLDHQYAAXXXXXXXXXXXXXXXXLPRYDFLQLLAHSQRTLRAMHCAEFSYVTGLTVEE 224
            MKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLDHQYAAXXXXXXXXXXXXXXXXLPRYDFLQLLAHSQRTLRAMHCAEFSYVTGLTVEE
Sbjct:    1 MKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLDHQYAAXXXXXXXXXXXXXXXXLPRYDFLQLLAHSQRTLRAMHCAEFSYVTGLTVEE 224          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A6H5K7B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7B9_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.400e-28
Identity = 67/162 (41.36%), Postives = 93/162 (57.41%), Query Frame = 0
Query:    9 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLDHQ 170
            +V +  LN+LVM YLV  G+ +AAEHF  ESGTD  VDL +++ R+ +  A+M G   +AM L N   P +L+    L F L +Q ++EL+ RGDAD AL +A + LAP    D  +L Q+E+A+  LA        L G    E R A   +LN A+L  Q
Sbjct:   39 EVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVEAMKLANDLDPTMLDRDRELRFGLLKQRLLELVRRGDADEALSFAAEHLAPEGAQDPAILRQIEEAVTLLAFEDATSSPLSGLLDMEQRHAAAGRLNAAVLQSQ 200          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: UPI000B8F02DC (glucose-induced degradation protein 8 homolog n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B8F02DC)

HSP 1 Score: 111 bits (278), Expect = 1.550e-26
Identity = 64/163 (39.26%), Postives = 99/163 (60.74%), Query Frame = 0
Query:    9 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLT-ELRRALVKQLNVAMLDHQ 170
            QVPR  +N L+M YLVT G ++AAE F  ESGT+P VDL+++D R+++L  +  G+  +A+ ++N   P LL+    L F L++QH+IELI   + DAAL +A + LA    ++  +L +LE+ L  LA   DA ++  G  L    R+ +  +LN A L  +
Sbjct:   32 QVPRSEVNKLIMNYLVTEGFKDAAEKFQIESGTEPGVDLKTLDKRIKILEKIQEGEIQKAIHMINAYQPQLLDDNRYLYFHLQQQHLIELIRAKNIDAALKFAQENLADQGEENTEVLEELERTLALLAF-EDAEISPFGDLLALSHRQKVASELNTAFLGQE 193          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: D8U9V7_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U9V7_VOLCA)

HSP 1 Score: 110 bits (274), Expect = 5.010e-26
Identity = 63/162 (38.89%), Postives = 98/162 (60.49%), Query Frame = 0
Query:   10 VPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPL-TELRRALVKQLNVAMLDHQ 170
            VP+  +N L+M +LVT G+ EAA  F++ESGT P V+L ++  RM V  A+  G    A+A +N   P +LE +P L F L++Q +IELI  G+ ++ALD+A + LAPLA ++   L +LE+ +  LA   D + + +G  +    R+    +LN A+L  Q
Sbjct:   25 VPKDDMNKLIMNFLVTEGYVEAARMFAKESGTAPGVNLDAITDRMEVRRALQSGDVEAAVARVNDLDPEILESQPKLFFHLQQQRLIELIRAGNVESALDFAQENLAPLAEENAEFLEELERTVALLAF-EDTNASPVGDLMDVAQRQKTASELNAAILQSQ 185          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A2G8JS59_STIJA (Putative glucose-induced degradation protein 8-like (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JS59_STIJA)

HSP 1 Score: 109 bits (272), Expect = 8.390e-26
Identity = 61/160 (38.12%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    9 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLD 168
            QV R  +N L+M YLVT G +EAAE F  ESGTDP ++L S+D ++++  AV  G+  +A+ ++N   P LL+    L F L++QH+IELI + D + AL YA   LA    +D  +L +LE+ L  LA                 R+ +  +LN A+L+
Sbjct:   19 QVTRSDMNKLIMNYLVTEGFKEAAEKFQEESGTDPGIELSSLDNKLQIREAVQDGRLEEAITMVNDIHPELLDTNRYLYFHLQQQHLIELIRQRDIEGALAYAQSHLAEHGEEDNNVLPELERTLALLAFEQPDTSPFADLLEVSQRQKVASELNAAILE 178          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A8J4C3T0_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4C3T0_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 2.000e-25
Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 0
Query:   10 VPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPL-TELRRALVKQLNVAMLDHQ 170
            +P+  LN L+M +LVT G+ EAA  F +ESGT P V+L ++  RM V  A+ GG    AM  +N   P +LE +P L F L++Q +IE I  G+ ++ALD+A   LAPLA ++   L +LE+ +  LA   D+  + +G  +    R+    +LN A+L  Q
Sbjct:   26 IPKSDLNKLIMNFLVTEGYVEAARVFEKESGTAPGVNLDAITDRMEVRRALQGGDVEAAMERVNDLDPEILESQPKLFFHLQQQRLIEFIRAGNVESALDFAQQNLAPLAEENAEFLEELERTVALLAF-EDSKSSPVGDLMDVAQRQKTASELNAAILQSQ 186          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A0L7R0J7_9HYME (Protein C20orf11 n=2 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7R0J7_9HYME)

HSP 1 Score: 108 bits (269), Expect = 2.620e-25
Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = 0
Query:   12 RRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTEL-----RRALVKQLNVAMLDHQY 171
            R  +NDL+M YLVT G +EAAE F +ESG +P VDL S+D R+R+  A+  G   +A  L+N   P LL+    L F L++ H+IELI  G  + AL +A D L+     +  +L +LE+ L  LA   + H +    P ++L     R+ +   LN A+L  +Y
Sbjct:   26 RASMNDLIMNYLVTEGFKEAAEKFQQESGVEPTVDLSSLDNRIRIREAIQNGNIQKATELVNQLHPELLDNDRHLYFRLQQLHLIELIRTGKVEEALQFAQDRLSEAGESNNNILCELERTLALLAFD-EPHKS----PYSDLLHPTHRQKIASDLNAAILKMEY 185          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: UPI0006C98E41 (glucose-induced degradation protein 8 homolog n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C98E41)

HSP 1 Score: 108 bits (269), Expect = 2.740e-25
Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = 0
Query:    9 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTEL-----RRALVKQLNVAMLDHQY 171
            QV R  +N+L+M YLVT G +EAAE F +ESG  P V+L S+D R+R+  A+  G+  +A  L+N   P LL+    L F L++ H+IELI  G  + AL +A ++L+     DE +L +LE+ L  LA            P ++L     R+ +  +LN A+L  +Y
Sbjct:   25 QVQRTQMNNLIMNYLVTEGFKEAAEKFQQESGVKPAVELDSMDDRIRIRDAIQNGRIEEAKTLVNQLHPELLDNDRYLHFHLQQLHLIELIRSGRIEEALQFAQEQLSEAGESDENILGELERTLALLAFDEPQK-----SPFSDLLHPTHRQKIASELNAAILKMEY 187          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A3B3RN33_9TELE (Glucose-induced degradation protein 8 homolog n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RN33_9TELE)

HSP 1 Score: 107 bits (267), Expect = 5.040e-25
Identity = 61/162 (37.65%), Postives = 98/162 (60.49%), Query Frame = 0
Query:   10 VPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALV-KQLNVAMLDHQ 170
            + R  +N L+M YL+T G +EAAE F  ESG +P VDL S+D R+++   ++ GQ  +A+AL+NG  P LL+    L F L++QH+IELI   + ++AL++A  +LA    +    L ++E+ L  LA   D   +  G  L  ++R  V  ++N A+LD++
Sbjct:   24 IQRADMNRLIMNYLITEGFKEAAEKFRMESGIEPSVDLDSLDERIKIREMILKGQIQEAVALINGLHPELLDSNRYLYFHLQQQHLIELIRLRETESALEFAQMQLAEQGEESRECLTEMERTLALLAFD-DPQDSPFGDLLNVIQRQKVWSEVNQAVLDYE 184          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A1D2NN00_ORCCI (Glucose-induced degradation protein 8 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NN00_ORCCI)

HSP 1 Score: 107 bits (267), Expect = 6.330e-25
Identity = 60/160 (37.50%), Postives = 96/160 (60.00%), Query Frame = 0
Query:    9 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLT-ELRRALVKQLNVAML 167
            Q+PR  +N L+M YLVT G ++AAE F  ESGT+P VDL ++D R+++L ++  G+  +A+ ++N   P LL+    L F L++QH+IELI + + D AL +A + LA    ++  +L +LE+ L  LA   D   +  G  L    R+ +  + N+A L
Sbjct:   32 QIPRSEINKLIMNYLVTEGFKDAAEKFQDESGTEPGVDLTTLDQRIKILESIQDGKIQEAVQMINSFQPQLLDDNRYLFFHLQQQHLIELIRQKNIDGALKFAQEHLADQGEENSQVLEELERTLALLAF-EDPESSPFGDLLALSHRQKVASEFNIAFL 190          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFL1_9STRA3.950e-140100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K7B9_9PHAE1.400e-2841.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI000B8F02DC1.550e-2639.26glucose-induced degradation protein 8 homolog n=1 ... [more]
D8U9V7_VOLCA5.010e-2638.89Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A2G8JS59_STIJA8.390e-2638.13Putative glucose-induced degradation protein 8-lik... [more]
A0A8J4C3T0_9CHLO2.000e-2538.89Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A0L7R0J7_9HYME2.620e-2538.18Protein C20orf11 n=2 Tax=Habropoda laboriosa TaxID... [more]
UPI0006C98E412.740e-2537.50glucose-induced degradation protein 8 homolog n=1 ... [more]
A0A3B3RN33_9TELE5.040e-2537.65Glucose-induced degradation protein 8 homolog n=2 ... [more]
A0A1D2NN00_ORCCI6.330e-2537.50Glucose-induced degradation protein 8 n=1 Tax=Orch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006595CTLH, C-terminal LisH motifSMARTSM00668ctlhcoord: 49..106
e-value: 8.0E-7
score: 38.7
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 49..106
score: 10.654532
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 11..43
e-value: 6.3E-4
score: 29.1
IPR006594LIS1 homology motifPFAMPF08513LisHcoord: 15..39
e-value: 3.2E-6
score: 26.9
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 11..43
score: 9.596348
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 52..169
e-value: 9.9E-11
score: 41.8
NoneNo IPR availablePANTHERPTHR12864RAN BINDING PROTEIN 9-RELATEDcoord: 7..139
NoneNo IPR availablePANTHERPTHR12864:SF61GLUCOSE-INDUCED DEGRADATION PROTEIN 8 HOMOLOGcoord: 7..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_107contigContig_107:456707..458070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352075mRNA_11617Tribonema minus UTEX_B_3156 mRNAContig_107 456595..458150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352075|estExt_Genemark1.C_Ctg_1070063 ID=Trimin1|352075|estExt_Genemark1.C_Ctg_1070063|Name=jgi.p|Trimin1|352075|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=225bp
MKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSV
DGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIE
RGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPP
LTELRRALVKQLNVAMLDHQYAAAAAAAHKVQQQQPPPPLPRYDFLQLLA
HSQRTLRAMHCAEFSYVTGLTVEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006595CTLH_C
IPR006594LisH
IPR024964CTLH/CRA