mRNA_11617 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352075
Unique NamemRNA_11617
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A835ZFL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL1_9STRA)

HSP 1 Score: 399 bits (1026), Expect = 6.760e-139
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 2
Query:  113 MKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLDHQYAAXXXXXXXXXXXXXXXXLPRYDFLQLLAHSQRTLRAMHCAEFSYVTGLTVEE 784
            MKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLDHQYAAXXXXXXXXXXXXXXXXLPRYDFLQLLAHSQRTLRAMHCAEFSYVTGLTVEE
Sbjct:    1 MKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLDHQYAAXXXXXXXXXXXXXXXXLPRYDFLQLLAHSQRTLRAMHCAEFSYVTGLTVEE 224          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A6H5K7B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7B9_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 5.420e-28
Identity = 67/162 (41.36%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  137 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLDHQ 622
            +V +  LN+LVM YLV  G+ +AAEHF  ESGTD  VDL +++ R+ +  A+M G   +AM L N   P +L+    L F L +Q ++EL+ RGDAD AL +A + LAP    D  +L Q+E+A+  LA        L G    E R A   +LN A+L  Q
Sbjct:   39 EVAKGELNELVMNYLVVEGYRDAAEHFVEESGTDAKVDLTTIEERVAIRKAMMQGNVVEAMKLANDLDPTMLDRDRELRFGLLKQRLLELVRRGDADEALSFAAEHLAPEGAQDPAILRQIEEAVTLLAFEDATSSPLSGLLDMEQRHAAAGRLNAAVLQSQ 200          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: UPI000B8F02DC (glucose-induced degradation protein 8 homolog n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B8F02DC)

HSP 1 Score: 112 bits (279), Expect = 5.660e-26
Identity = 64/163 (39.26%), Postives = 99/163 (60.74%), Query Frame = 2
Query:  137 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLT-ELRRALVKQLNVAMLDHQ 622
            QVPR  +N L+M YLVT G ++AAE F  ESGT+P VDL+++D R+++L  +  G+  +A+ ++N   P LL+    L F L++QH+IELI   + DAAL +A + LA    ++  +L +LE+ L  LA   DA ++  G  L    R+ +  +LN A L  +
Sbjct:   32 QVPRSEVNKLIMNYLVTEGFKDAAEKFQIESGTEPGVDLKTLDKRIKILEKIQEGEIQKAIHMINAYQPQLLDDNRYLYFHLQQQHLIELIRAKNIDAALKFAQENLADQGEENTEVLEELERTLALLAF-EDAEISPFGDLLALSHRQKVASELNTAFLGQE 193          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: D8U9V7_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U9V7_VOLCA)

HSP 1 Score: 110 bits (275), Expect = 1.800e-25
Identity = 63/162 (38.89%), Postives = 98/162 (60.49%), Query Frame = 2
Query:  140 VPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPL-TELRRALVKQLNVAMLDHQ 622
            VP+  +N L+M +LVT G+ EAA  F++ESGT P V+L ++  RM V  A+  G    A+A +N   P +LE +P L F L++Q +IELI  G+ ++ALD+A + LAPLA ++   L +LE+ +  LA   D + + +G  +    R+    +LN A+L  Q
Sbjct:   25 VPKDDMNKLIMNFLVTEGYVEAARMFAKESGTAPGVNLDAITDRMEVRRALQSGDVEAAVARVNDLDPEILESQPKLFFHLQQQRLIELIRAGNVESALDFAQENLAPLAEENAEFLEELERTVALLAF-EDTNASPVGDLMDVAQRQKTASELNAAILQSQ 185          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A2G8JS59_STIJA (Putative glucose-induced degradation protein 8-like (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JS59_STIJA)

HSP 1 Score: 109 bits (273), Expect = 2.990e-25
Identity = 61/160 (38.12%), Postives = 91/160 (56.88%), Query Frame = 2
Query:  137 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALVKQLNVAMLD 616
            QV R  +N L+M YLVT G +EAAE F  ESGTDP ++L S+D ++++  AV  G+  +A+ ++N   P LL+    L F L++QH+IELI + D + AL YA   LA    +D  +L +LE+ L  LA                 R+ +  +LN A+L+
Sbjct:   19 QVTRSDMNKLIMNYLVTEGFKEAAEKFQEESGTDPGIELSSLDNKLQIREAVQDGRLEEAITMVNDIHPELLDTNRYLYFHLQQQHLIELIRQRDIEGALAYAQSHLAEHGEEDNNVLPELERTLALLAFEQPDTSPFADLLEVSQRQKVASELNAAILE 178          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: UPI0006C98E41 (glucose-induced degradation protein 8 homolog n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C98E41)

HSP 1 Score: 109 bits (272), Expect = 4.930e-25
Identity = 65/177 (36.72%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  110 RMKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTEL-----RRALVKQLNVAMLDHQY 625
            R+++ H   QV R  +N+L+M YLVT G +EAAE F +ESG  P V+L S+D R+R+  A+  G+  +A  L+N   P LL+    L F L++ H+IELI  G  + AL +A ++L+     DE +L +LE+ L  LA            P ++L     R+ +  +LN A+L  +Y
Sbjct:   19 RLEEGH---QVQRTQMNNLIMNYLVTEGFKEAAEKFQQESGVKPAVELDSMDDRIRIRDAIQNGRIEEAKTLVNQLHPELLDNDRYLHFHLQQLHLIELIRSGRIEEALQFAQEQLSEAGESDENILGELERTLALLAFDEPQK-----SPFSDLLHPTHRQKIASELNAAILKMEY 187          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A8J4C3T0_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4C3T0_9CHLO)

HSP 1 Score: 108 bits (271), Expect = 7.060e-25
Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 2
Query:  140 VPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPL-TELRRALVKQLNVAMLDHQ 622
            +P+  LN L+M +LVT G+ EAA  F +ESGT P V+L ++  RM V  A+ GG    AM  +N   P +LE +P L F L++Q +IE I  G+ ++ALD+A   LAPLA ++   L +LE+ +  LA   D+  + +G  +    R+    +LN A+L  Q
Sbjct:   26 IPKSDLNKLIMNFLVTEGYVEAARVFEKESGTAPGVNLDAITDRMEVRRALQGGDVEAAMERVNDLDPEILESQPKLFFHLQQQRLIEFIRAGNVESALDFAQQNLAPLAEENAEFLEELERTVALLAF-EDSKSSPVGDLMDVAQRQKTASELNAAILQSQ 186          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A0L7R0J7_9HYME (Protein C20orf11 n=2 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7R0J7_9HYME)

HSP 1 Score: 108 bits (270), Expect = 9.200e-25
Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  146 RRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTEL-----RRALVKQLNVAMLDHQY 625
            R  +NDL+M YLVT G +EAAE F +ESG +P VDL S+D R+R+  A+  G   +A  L+N   P LL+    L F L++ H+IELI  G  + AL +A D L+     +  +L +LE+ L  LA   + H +    P ++L     R+ +   LN A+L  +Y
Sbjct:   26 RASMNDLIMNYLVTEGFKEAAEKFQQESGVEPTVDLSSLDNRIRIREAIQNGNIQKATELVNQLHPELLDNDRHLYFRLQQLHLIELIRTGKVEEALQFAQDRLSEAGESNNNILCELERTLALLAFD-EPHKS----PYSDLLHPTHRQKIASDLNAAILKMEY 185          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A3B3RN33_9TELE (Glucose-induced degradation protein 8 homolog n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RN33_9TELE)

HSP 1 Score: 107 bits (268), Expect = 1.760e-24
Identity = 61/162 (37.65%), Postives = 98/162 (60.49%), Query Frame = 2
Query:  140 VPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLTELRRALV-KQLNVAMLDHQ 622
            + R  +N L+M YL+T G +EAAE F  ESG +P VDL S+D R+++   ++ GQ  +A+AL+NG  P LL+    L F L++QH+IELI   + ++AL++A  +LA    +    L ++E+ L  LA   D   +  G  L  ++R  V  ++N A+LD++
Sbjct:   24 IQRADMNRLIMNYLITEGFKEAAEKFRMESGIEPSVDLDSLDERIKIREMILKGQIQEAVALINGLHPELLDSNRYLYFHLQQQHLIELIRLRETESALEFAQMQLAEQGEESRECLTEMERTLALLAFD-DPQDSPFGDLLNVIQRQKVWSEVNQAVLDYE 184          
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Match: A0A1D2NN00_ORCCI (Glucose-induced degradation protein 8 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NN00_ORCCI)

HSP 1 Score: 107 bits (268), Expect = 2.210e-24
Identity = 60/160 (37.50%), Postives = 96/160 (60.00%), Query Frame = 2
Query:  137 QVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSVDGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIERGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPPLT-ELRRALVKQLNVAML 613
            Q+PR  +N L+M YLVT G ++AAE F  ESGT+P VDL ++D R+++L ++  G+  +A+ ++N   P LL+    L F L++QH+IELI + + D AL +A + LA    ++  +L +LE+ L  LA   D   +  G  L    R+ +  + N+A L
Sbjct:   32 QIPRSEINKLIMNYLVTEGFKDAAEKFQDESGTEPGVDLTTLDQRIKILESIQDGKIQEAVQMINSFQPQLLDDNRYLFFHLQQQHLIELIRQKNIDGALKFAQEHLADQGEENSQVLEELERTLALLAF-EDPESSPFGDLLALSHRQKVASEFNIAFL 190          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352075 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFL1_9STRA6.760e-139100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K7B9_9PHAE5.420e-2841.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI000B8F02DC5.660e-2639.26glucose-induced degradation protein 8 homolog n=1 ... [more]
D8U9V7_VOLCA1.800e-2538.89Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A2G8JS59_STIJA2.990e-2538.13Putative glucose-induced degradation protein 8-lik... [more]
UPI0006C98E414.930e-2536.72glucose-induced degradation protein 8 homolog n=1 ... [more]
A0A8J4C3T0_9CHLO7.060e-2538.89Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A0L7R0J7_9HYME9.200e-2538.18Protein C20orf11 n=2 Tax=Habropoda laboriosa TaxID... [more]
A0A3B3RN33_9TELE1.760e-2437.65Glucose-induced degradation protein 8 homolog n=2 ... [more]
A0A1D2NN00_ORCCI2.210e-2437.50Glucose-induced degradation protein 8 n=1 Tax=Orch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_107contigContig_107:456595..458150 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352075|estExt_Genemark1.C_Ctg_1070063
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006109,GO:0006111,GO:0006508,GO:0006511,GO:0006807,GO:0007089,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010564,GO:0010675,GO:0010677,GO:0010906,GO:0019222,GO:0019538,GO:0019941,GO:0030054,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045721,GO:0045787,GO:0045912,GO:0045931,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051603,GO:0051726,GO:0062012,GO:0062014,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090068,GO:1900087,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:2000045
Preferred nameGID8
Descriptionnegative regulation of gluconeogenesis
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2659@1|root,KOG2659@2759|Eukaryota
Evalue5.74e-29
Seed ortholog2880.D7G2A7
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLisH dimerisation motif, subgroup
Ec32 orthologEc-16_001850.1
TranscriptId352397
TrackFilteredModels1
ProteinId352075
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352075gene_11617Tribonema minus UTEX_B_3156 geneContig_107 456595..458150 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352075Trimin1|352075|estExt_Genemark1.C_Ctg_1070063Tribonema minus UTEX_B_3156 polypeptideContig_107 456707..458070 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11617_1exon_11617_1Tribonema minus UTEX_B_3156 exonContig_107 456595..456849 +
exon_11617_2exon_11617_2Tribonema minus UTEX_B_3156 exonContig_107 457111..457360 +
exon_11617_3exon_11617_3Tribonema minus UTEX_B_3156 exonContig_107 457789..458150 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_11617UTR5_11617Tribonema minus UTEX_B_3156 five_prime_UTRContig_107 456595..456706 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11617CDS_11617Tribonema minus UTEX_B_3156 CDSContig_107 456707..456849 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_11617UTR3_11617Tribonema minus UTEX_B_3156 three_prime_UTRContig_107 458071..458150 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11617 ID=mRNA_11617|Name=jgi.p|Trimin1|352075|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=867bp|location=Sequence derived from alignment at Contig_107:456595..458150+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGGGTATTGAGCTCAATTGAGGGACAGGCAGGTGCCGGCTCAAGGATCA
AGCAGGCAGCCTTGGCGGCATTCAGACATGGGCAGGCAGCAGTGACCGGC
AACGTCAGGCGGATGAAGCAATCACACCCAGATCAACAAGTGCCGAGGCG
CGTGTTGAACGACCTTGTCATGCAATATCTCGTCACCAATGGGCACGAAG
AAGCCGCGGAACACTTCTCCAGAGAGAGCGGCACAGATCCACCTGTGGAC
TTAAGGTCCGTGGACGGGCGCATGCGCGTGCTGAGCGCTGTGATGGGAGG
CCAGTCCTCCCAGGCCATGGCGCTGCTCAACGGCGCGTTCCCGCTGCTGC
TGGAGGGGCGCCCCGCGCTCGTCTTCGCGCTCAAGCGCCAGCACGTCATT
GAGCTCATCGAGCGCGGCGACGCGGACGCCGCGCTGGACTACGCGACGGA
CGAGCTCGCGCCGCTCGCGCGCGACGACGAGGGGCTGCTGGCGCAGCTGG
AGCAGGCGCTGATGCGACTCGCGCTGGGCGCAGACGCGCACGTCGCGCTG
ATAGGGCCCCCCCTCACCGAGCTGCGCCGCGCGCTTGTCAAACAACTCAA
TGTGGCCATGCTGGACCACCAATACGCGGCGGCGGCAGCGGCGGCGCACA
AGGTGCAGCAGCAACAGCCGCCGCCGCCGCTGCCGCGGTACGACTTTCTG
CAGCTGCTGGCGCACTCGCAGCGCACGCTGCGCGCCATGCACTGCGCAGA
GTTCTCGTATGTGACGGGGCTCACGGTCGAGGAATGACGCGGCGCCGCGC
AGCGCTGCCGCACGGGGAAGGCGTTGGCTGAGCGACTGCAGCGTTGGCGC
GGAGAGAAGGGGGGGTT
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protein sequence of jgi.p|Trimin1|352075

>Trimin1|352075|estExt_Genemark1.C_Ctg_1070063 ID=Trimin1|352075|estExt_Genemark1.C_Ctg_1070063|Name=jgi.p|Trimin1|352075|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=225bp
MKQSHPDQQVPRRVLNDLVMQYLVTNGHEEAAEHFSRESGTDPPVDLRSV
DGRMRVLSAVMGGQSSQAMALLNGAFPLLLEGRPALVFALKRQHVIELIE
RGDADAALDYATDELAPLARDDEGLLAQLEQALMRLALGADAHVALIGPP
LTELRRALVKQLNVAMLDHQYAAAAAAAHKVQQQQPPPPLPRYDFLQLLA
HSQRTLRAMHCAEFSYVTGLTVEE*
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mRNA from alignment at Contig_107:456595..458150+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11617 ID=mRNA_11617|Name=jgi.p|Trimin1|352075|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1556bp|location=Sequence derived from alignment at Contig_107:456595..458150+ (Tribonema minus UTEX_B_3156 )
GCGGGTATTGAGCTCAATTGAGGGACAGGCAGGTGCCGGCTCAAGGATCA AGCAGGCAGCCTTGGCGGCATTCAGACATGGGCAGGCAGCAGTGACCGGC AACGTCAGGCGGATGAAGCAATCACACCCAGATCAACAAGTGCCGAGGCG CGTGTTGAACGACCTTGTCATGCAATATCTCGTCACCAATGGGCACGAAG AAGCCGCGGAACACTTCTCCAGAGAGAGCGGCACAGATCCACCTGTGGAC TTAAGGTGGGTCTTGGAGCTTCTCAGTGACTGCAAGACGTGCTTTGACGT CCCTGAGCTCCATCCAGTAGTCACCAACTGTGATGGAAGCAGGGGCATCT GAAGCAACACACCATGAGACTATGCTCGAATCAACTTTTGCATTGAAAGG TTCCCCTTGCGGTCAGCCACAACACGTCAGCTGGATTATGCGCAGCCTCG TGCCTTGCCGTGCGCACAGAGATCTTAGGGTTAGCTCTTGTCTCCTGCCC GCGCCCGCCCTCGCAGGTCCGTGGACGGGCGCATGCGCGTGCTGAGCGCT GTGATGGGAGGCCAGTCCTCCCAGGCCATGGCGCTGCTCAACGGCGCGTT CCCGCTGCTGCTGGAGGGGCGCCCCGCGCTCGTCTTCGCGCTCAAGCGCC AGCACGTCATTGAGCTCATCGAGCGCGGCGACGCGGACGCCGCGCTGGAC TACGCGACGGACGAGCTCGCGCCGCTCGCGCGCGACGACGAGGGGCTGCT GGCGCAGCTGGAGCAGGTGCGCGGGGGTGCAGTATTGAGATGTCAGGGTA TGTATGAAGGGTGGGTAGGTGTACGGGGTAAATGGCCGTGGCGGTCGCGC TGGCTCCGGCTCCAGCGCAGTCTGCGCAGCCATGCCAATGGGTGTGGGAG ATGCGAACATCATGGCCGAGCGCGGCACAGCGGCTGCTGGCGCGCAGCGG CTCGCCGACGCACGCGCTCTGCCAGCCCGCCCTCCGCTGTCGGCGCACCG TGGCAGTGCTCCTCGCTGTGACGCCCATGAGGCTCGCTCGCTGCCACCCG CATGGCTATGCAATCACAGACTCGTCGTGCAGAGTCCGCCGCCGCCGCCG CCGCCGCCGCTGTTGCTGCTGCTGCTGCTGCTCGGCCCGCGGCGTCCGCT GTCCCGCCTCACGCCACAACCCTGCGCTCTCTTACGCCCCGCAGGCGCTG ATGCGACTCGCGCTGGGCGCAGACGCGCACGTCGCGCTGATAGGGCCCCC CCTCACCGAGCTGCGCCGCGCGCTTGTCAAACAACTCAATGTGGCCATGC TGGACCACCAATACGCGGCGGCGGCAGCGGCGGCGCACAAGGTGCAGCAG CAACAGCCGCCGCCGCCGCTGCCGCGGTACGACTTTCTGCAGCTGCTGGC GCACTCGCAGCGCACGCTGCGCGCCATGCACTGCGCAGAGTTCTCGTATG TGACGGGGCTCACGGTCGAGGAATGACGCGGCGCCGCGCAGCGCTGCCGC ACGGGGAAGGCGTTGGCTGAGCGACTGCAGCGTTGGCGCGGAGAGAAGGG GGGGTT
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Coding sequence (CDS) from alignment at Contig_107:456595..458150+

>mRNA_11617 ID=mRNA_11617|Name=jgi.p|Trimin1|352075|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=675bp|location=Sequence derived from alignment at Contig_107:456595..458150+ (Tribonema minus UTEX_B_3156 )
ATGAAGCAATCACACCCAGATCAACAAGTGCCGAGGCGCGTGTTGAACGA
CCTTGTCATGCAATATCTCGTCACCAATGGGCACGAAGAAGCCGCGGAAC
ACTTCTCCAGAGAGAGCGGCACAGATCCACCTGTGGACTTAAGGTCCGTG
GACGGGCGCATGCGCGTGCTGAGCGCTGTGATGGGAGGCCAGTCCTCCCA
GGCCATGGCGCTGCTCAACGGCGCGTTCCCGCTGCTGCTGGAGGGGCGCC
CCGCGCTCGTCTTCGCGCTCAAGCGCCAGCACGTCATTGAGCTCATCGAG
CGCGGCGACGCGGACGCCGCGCTGGACTACGCGACGGACGAGCTCGCGCC
GCTCGCGCGCGACGACGAGGGGCTGCTGGCGCAGCTGGAGCAGGCGCTGA
TGCGACTCGCGCTGGGCGCAGACGCGCACGTCGCGCTGATAGGGCCCCCC
CTCACCGAGCTGCGCCGCGCGCTTGTCAAACAACTCAATGTGGCCATGCT
GGACCACCAATACGCGGCGGCGGCAGCGGCGGCGCACAAGGTGCAGCAGC
AACAGCCGCCGCCGCCGCTGCCGCGGTACGACTTTCTGCAGCTGCTGGCG
CACTCGCAGCGCACGCTGCGCGCCATGCACTGCGCAGAGTTCTCGTATGT
GACGGGGCTCACGGTCGAGGAATGA
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