Trimin1|352055|estExt_Genemark1.C_Ctg_1070030 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352055
Unique NameTrimin1|352055|estExt_Genemark1.C_Ctg_1070030
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length293
Homology
BLAST of jgi.p|Trimin1|352055 vs. uniprot
Match: A0A836CMK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK3_9STRA)

HSP 1 Score: 559 bits (1440), Expect = 8.200e-201
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query:    1 MRQRALVALLVAGSACAFHTCSPASASVRHKNSVRRRVSEEVESFDVDFDIDRLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASRSAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGGAQLAPPDTAVLERIRVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWGEGRGAYALLQEVKAAVNAPKLKVTLPYRGVEESFKWNQGLGEGRGSIIWTFEFE 292
            MRQRALVALLVAGSACAFHTCSPASASVRHKNSVRRRVSEEVESFDVDFDIDRLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASRSAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGGAQLAPPDTAVLERIRVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWGEGRGAYALLQEVKAAVNAPKLKVTLPYRGVEESFKWNQGLGEGRGSIIWTFEFE
Sbjct:    1 MRQRALVALLVAGSACAFHTCSPASASVRHKNSVRRRVSEEVESFDVDFDIDRLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASRSAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGGAQLAPPDTAVLERIRVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWGEGRGAYALLQEVKAAVNAPKLKVTLPYRGVEESFKWNQGLGEGRGSIIWTFEFE 292          
BLAST of jgi.p|Trimin1|352055 vs. uniprot
Match: D7FMZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ7_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 8.120e-54
Identity = 106/264 (40.15%), Postives = 168/264 (63.64%), Query Frame = 0
Query:   39 SEEVESFDVDFDID--RLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASRSAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGG----AQLAPPDTAVLERIRVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWG---EGRGAYALLQEVKAAVNAPKLKVTLPYRGVEESFKWNQGL-GEGRGSIIWTFEFE 292
            +EEVE F++D ++D  +L+   T IT+VK +G VPASS++VYDC+HG+WLL Q+AYDRKI+LF+SRS   +  +++ +PD+++ +F+GA +PK  KR+LK++ L +VV  DA +  A+ +++  ER RLAAKGLS++S++RERYL   GG    A    P  +++  +R F+++ E  S     VA  +  + + C  + V+GLWG   +      +L+ V+       L+V + + G  +S  W  GL G  RG I+WTF +E
Sbjct:    3 TEEVEDFEIDMEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRSVRQLLSISSSLPDNSRFIFSGALIPKQIKRILKMKGLSAVVARDAESVVAMEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGANQRGPVGSLVSGLRTFVRIQEGQSVDD--VAEIVNTIEQTCRNISVVGLWGGDMDPETCLNMLEAVRTKSGISNLRVAMEHLG-PKSAGWFTGLRGARRGPIMWTFNYE 263          
BLAST of jgi.p|Trimin1|352055 vs. uniprot
Match: A0A6V1VHY5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VHY5_HETAK)

HSP 1 Score: 77.8 bits (190), Expect = 9.830e-13
Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 0
Query:   43 ESFDVDFDIDRLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASRSAAGVADLAAIVPD--DAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGGAQLAPPDTAVLERIRVFLKLPEE 209
            ++F++D D D ++  N  IT +K+   +P ++ I  +CT  +W+  Q+A DR I  F SRSA  +   A   PD  DA +L TG  L K  KRL K   ++ + V +   A  LS  +A E AR   K  SKVS +R++YL A  G   A      LE     L++  E
Sbjct:   80 DTFEMDIDGDAINLFNERITTLKKA--LP-TARICLECTGLEWIFAQIAQDRGIDAFYSRSATALRKYAETAPDVADATLLLTGKVLEKQVKRLAKFPEVNCIAVSNKEEADILSQGLAAEIARAMKKRRSKVSASRDKYLDAKTGDSRAK---GYLESANYILRISSE 242          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352055 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CMK3_9STRA8.200e-201100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FMZ7_ECTSI8.120e-5440.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1VHY5_HETAK9.830e-1335.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 6.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_107contigContig_107:264283..265679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352055mRNA_11583Tribonema minus UTEX_B_3156 mRNAContig_107 264185..265820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352055|estExt_Genemark1.C_Ctg_1070030 ID=Trimin1|352055|estExt_Genemark1.C_Ctg_1070030|Name=jgi.p|Trimin1|352055|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=293bp
MRQRALVALLVAGSACAFHTCSPASASVRHKNSVRRRVSEEVESFDVDFD
IDRLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFA
SRSAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAA
ARALSDAMADERARLAAKGLSKVSRARERYLTAGGGAQLAPPDTAVLERI
RVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWGEGRGAYALLQEV
KAAVNAPKLKVTLPYRGVEESFKWNQGLGEGRGSIIWTFEFE*
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