Trimin1|164537|e_gw1.32.122.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|164537
Unique NameTrimin1|164537|e_gw1.32.122.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length209
Homology
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: A0A835YZN4_9STRA (Deoxycytidylate deaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN4_9STRA)

HSP 1 Score: 423 bits (1087), Expect = 8.270e-150
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
Query:    1 MLTGEEATDELQQQEAKLEPQAVPAPTWAVGGARKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDFGAADAATAEEAGTDGTL 208
            MLTGEEATDELQQQEAKLEPQAVPAPTWAVGGARKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDFGAADAATAEEAGTDGTL
Sbjct:    1 MLTGEEATDELQQQEAKLEPQAVPAPTWAVGGARKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDFGAADAATAEEAGTDGTL 208          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: D8LJR7_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR7_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.190e-85
Identity = 123/158 (77.85%), Postives = 139/158 (87.97%), Query Frame = 0
Query:   34 RKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDF 191
            R DYL WDDYFMSVAFLSAMRSKDPSTQVGACIVN DKRIVGIGYNGFP GCSD+ LPWAR A +ELDTKYPYVCHAEMNAILNKN+ADV+GC IYVALFPC +CAKLIIQSGI  VVY+SDKYR+  +  ASRR+ DL+GV+CR+H+  + ++TIDF
Sbjct:  122 RTDYLVWDDYFMSVAFLSAMRSKDPSTQVGACIVNEDKRIVGIGYNGFPMGCSDDDLPWARQADDELDTKYPYVCHAEMNAILNKNSADVKGCLIYVALFPCNECAKLIIQSGIREVVYLSDKYRETNSMKASRRLFDLSGVKCRQHIPKQDKITIDF 279          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: A0A7S2WUA8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUA8_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.200e-83
Identity = 128/192 (66.67%), Postives = 151/192 (78.65%), Query Frame = 0
Query:    9 DELQQQEAKLEPQAVPAPTWAVGGARK-DYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDFGAADAATA 199
            DE  ++ A+++P A  A   +  G ++ DYL WDDYFMSVAFLSAMRSKDPSTQVGACIVNPD RIVGIGYNGFP GCSD++LPW+R   ++LDTKY YV HAE+NAILNKN+A V GC +YVALFPC +CAKLIIQSGI  V+Y+SDKY D P FVASRRML+LAGV+ R+H    R+V IDFG     TA
Sbjct:   56 DEAGRKRARVQPAAGAAAGGSSAGTKRPDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDNRIVGIGYNGFPTGCSDDKLPWSREGGSKLDTKYMYVVHAEVNAILNKNSASVTGCRMYVALFPCNECAKLIIQSGITEVIYLSDKYHDLPEFVASRRMLNLAGVKFRQHSPKSRQVVIDFGVDKVVTA 247          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: A0A0D2VZ05_CAPO3 (Deoxycytidylate deaminase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VZ05_CAPO3)

HSP 1 Score: 248 bits (634), Expect = 4.790e-81
Identity = 116/182 (63.74%), Postives = 141/182 (77.47%), Query Frame = 0
Query:   11 LQQQEAKLEPQAVPAPTWAVGGARKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDFG 192
            L  Q +  EP  V     A    R+DYL W DYFM+VAFLSA RSKDPS+QVGACIVN + +IVGIGYNG P GC+D+ LPWAR A + LDTKY YVCHAE+NA+LNKNA+DV+GCTIYVALFPC +CAK+IIQSGI  V+Y SDKY D P FV SRR+ D+AG++ R+H+   +++TIDFG
Sbjct:    8 LNHQTSTFEPATVSDNAPAAVKKRQDYLPWADYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLPWARTAESPLDTKYMYVCHAELNAVLNKNASDVKGCTIYVALFPCNECAKIIIQSGIKEVIYKSDKYHDRPEFVVSRRLFDMAGIKYRQHIPKMKQITIDFG 189          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: A0A8K1CQ50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ50_PYTOL)

HSP 1 Score: 253 bits (646), Expect = 1.030e-80
Identity = 118/162 (72.84%), Postives = 138/162 (85.19%), Query Frame = 0
Query:   34 RKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNE--LDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDFGA 193
            RKDY+ WDDYFMSVAFLSAMRSKDPSTQVGACIVNPDK+IVGIGYNGFP GCSD+ LPWAR +     L+TKYPYVCHAEMNAILNKN ++++GCTIY+ALFPC +CAKLI+QSGI H+VY+SDKY D   F+ASRR+LDLAGV  R+H   + ++ IDF A
Sbjct:  183 RKDYISWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKKIVGIGYNGFPNGCSDDILPWARESKTNDPLETKYPYVCHAEMNAILNKNTSELKGCTIYIALFPCNECAKLIVQSGIRHIVYLSDKYHDDWKFIASRRLLDLAGVEYRQHRMEKNKLIIDFNA 344          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: A0A833THJ4_PHYIN (Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833THJ4_PHYIN)

HSP 1 Score: 251 bits (641), Expect = 2.060e-80
Identity = 126/192 (65.62%), Postives = 145/192 (75.52%), Query Frame = 0
Query:    2 LTGEEATDELQQQEAKLEPQAVPAPTWAVGGARKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWAR--AAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDF 191
            L G + + +  + E KLE Q            R DYL WDDYFMSVAFLSAMRSKDPSTQVGACIVNP+++IVGIGYNGFP GC D+ LPWAR  A  + LDTKYPYVCHAEMNAILNKN+ DV+GC+IYVALFPC +CAKLIIQSGIA VVY SDKY+    FVASRR+LD+AGV+  +H     +V IDF
Sbjct:  117 LDGNDVSWDASEDENKLETQKAVTTLPLAVQKRSDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVNPERKIVGIGYNGFPNGCGDDELPWARETATNSPLDTKYPYVCHAEMNAILNKNSTDVKGCSIYVALFPCNECAKLIIQSGIARVVYYSDKYKSDWKFVASRRLLDMAGVQYTQHKLQLSKVVIDF 308          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: H3G722_PHYRM (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G722_PHYRM)

HSP 1 Score: 245 bits (625), Expect = 4.520e-80
Identity = 118/160 (73.75%), Postives = 133/160 (83.12%), Query Frame = 0
Query:   34 RKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWAR--AAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDF 191
            R DYL WDDYFMSVAFLSAMRSKDPSTQVGACIV+P+++IVGIGYNGFP GC D+ LPWAR  A  + LDTKYPYVCHAEMNAILNKN+ DV+GCTIYVALFPC +CAKLIIQSGI+ VVY SDKY     FVASRR+LD+AGV+  +H     +V IDF
Sbjct:    3 RSDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVSPERKIVGIGYNGFPNGCGDDELPWARESATDSPLDTKYPYVCHAEMNAILNKNSTDVKGCTIYVALFPCNECAKLIIQSGISRVVYCSDKYNHDWKFVASRRLLDMAGVKYSQHKLQSAKVVIDF 162          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: A0A6G0JC42_LARCR (Deoxycytidylate deaminase n=2 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0JC42_LARCR)

HSP 1 Score: 245 bits (626), Expect = 7.380e-80
Identity = 114/171 (66.67%), Postives = 136/171 (79.53%), Query Frame = 0
Query:   24 PAPTWAVGGA---RKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDF 191
            P P    GG    R+DYL W DYFM+VAFLSA RSKDPS+QVGACIVN + +IVGIGYNG P GC D+ LPW+R A + LDTKYPYVCHAE+NAI+NKN+ADV+GCTIYVALFPC +CAKLIIQ+GI  VVY+SDKY D P  VASRR+L +AG++CR+    R ++ IDF
Sbjct:    6 PRPAHLNGGTTRKREDYLEWPDYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCDDDLLPWSRCAEDRLDTKYPYVCHAELNAIMNKNSADVKGCTIYVALFPCNECAKLIIQAGIKEVVYLSDKYHDTPEMVASRRLLSMAGIQCRQFNPKRTKIVIDF 176          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: W2PPZ7_PHYPN (CMP/dCMP-type deaminase domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PPZ7_PHYPN)

HSP 1 Score: 249 bits (637), Expect = 9.100e-80
Identity = 127/191 (66.49%), Postives = 147/191 (76.96%), Query Frame = 0
Query:    4 GEEATDELQQQEAKLEPQAVPAPTWAVGGA-RKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWAR--AAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDF 191
            G+ + DE + +    EP  +   T +VG   R DYL WDDYFMSVAFLSAMRSKDPSTQVGACIVNP+++IVGIGYNGFP GC D+ LPWAR  A  + LDTKYPYVCHAEMNAILNKN+ DV+GCTIYVALFPC +CAKLIIQSGIA VVY SDKY     FVASRR+LD+AGV+  +H     ++ IDF
Sbjct:  123 GDSSEDETKPE--TQEPATIQQVTASVGAQKRSDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVNPERKIVGIGYNGFPNGCGDDDLPWARESATSSPLDTKYPYVCHAEMNAILNKNSTDVKGCTIYVALFPCNECAKLIIQSGIARVVYCSDKYNSDWKFVASRRLLDMAGVQYTQHKLQLSKLVIDF 311          
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Match: A0A6P8HEW5_ACTTE (deoxycytidylate deaminase-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HEW5_ACTTE)

HSP 1 Score: 246 bits (628), Expect = 9.950e-80
Identity = 110/162 (67.90%), Postives = 134/162 (82.72%), Query Frame = 0
Query:   34 RKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDFGAAD 195
            R DYL WDDYFM+VAFLSA RSKDPS+QVGACIVN +K+IVGIGYNG P GC D+ LPW R A NELDTKYPYVCHAEMNAILNKN+ DV+GC++YVALFPC +C K++IQ+G+  +VYVSDKY D PA VASRRMLD+AG++ R+   ++  + +DF + D
Sbjct:   46 RTDYLPWDDYFMAVAFLSAQRSKDPSSQVGACIVNSEKKIVGIGYNGMPNGCCDDELPWDREAENELDTKYPYVCHAEMNAILNKNSTDVKGCSMYVALFPCNECTKIVIQAGLKEIVYVSDKYHDKPAMVASRRMLDMAGIKYRQFTPSKHNIVVDFTSID 207          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164537 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZN4_9STRA8.270e-150100.00Deoxycytidylate deaminase n=1 Tax=Tribonema minus ... [more]
D8LJR7_ECTSI1.190e-8577.85CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A7S2WUA8_9STRA1.200e-8366.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0D2VZ05_CAPO34.790e-8163.74Deoxycytidylate deaminase n=2 Tax=Capsaspora owcza... [more]
A0A8K1CQ50_PYTOL1.030e-8072.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A833THJ4_PHYIN2.060e-8065.63Cytidine and deoxycytidylate deaminase zinc-bindin... [more]
H3G722_PHYRM4.520e-8073.75CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A6G0JC42_LARCR7.380e-8066.67Deoxycytidylate deaminase n=2 Tax=Larimichthys cro... [more]
W2PPZ7_PHYPN9.100e-8066.49CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A6P8HEW5_ACTTE9.950e-8067.90deoxycytidylate deaminase-like n=1 Tax=Actinia ten... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 39..153
e-value: 2.8E-27
score: 94.5
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 39..177
score: 25.270412
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 32..204
e-value: 2.1E-68
score: 231.2
NoneNo IPR availablePIRSRPIRSR006769-3PIRSR006769-3coord: 109..180
e-value: 1.8E-7
score: 28.2
NoneNo IPR availablePIRSRPIRSR006769-1PIRSR006769-1coord: 109..180
e-value: 1.8E-7
score: 28.2
NoneNo IPR availablePIRSRPIRSR006019-1PIRSR006019-1coord: 34..173
e-value: 1.4E-49
score: 165.5
NoneNo IPR availablePIRSRPIRSR006019-2PIRSR006019-2coord: 34..173
e-value: 1.4E-49
score: 165.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
IPR015517Deoxycytidylate deaminase-relatedPANTHERPTHR11086DEOXYCYTIDYLATE DEAMINASE-RELATEDcoord: 20..195
IPR016192APOBEC/CMP deaminase, zinc-bindingPROSITEPS00903CYT_DCMP_DEAMINASES_1coord: 109..142
IPR035105Deoxycytidylate deaminase domainCDDcd01286deoxycytidylate_deaminasecoord: 41..171
e-value: 4.26667E-55
score: 169.763
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 41..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:359953..362845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164537mRNA_5197Tribonema minus UTEX_B_3156 mRNAContig_32 359953..362845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|164537|e_gw1.32.122.1 ID=Trimin1|164537|e_gw1.32.122.1|Name=jgi.p|Trimin1|164537|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=209bp
MLTGEEATDELQQQEAKLEPQAVPAPTWAVGGARKDYLHWDDYFMSVAFL
SAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNEL
DTKYPYVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHV
VYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDFGAADAATAE
EAGTDGTL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR015517dCMP_deaminase-rel
IPR016192APOBEC/CMP_deaminase_Zn-bd
IPR035105Deoxycytidylate_deaminase_dom
IPR016193Cytidine_deaminase-like