mRNA_5228 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|58160
Unique NamemRNA_5228
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A835YVZ0_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ0_9STRA)

HSP 1 Score: 269 bits (688), Expect = 2.830e-90
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDVNMAGVD 473
            MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDVNMAGVD
Sbjct:    1 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDVNMAGVD 144
[Close]
BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A7J6P5Z0_PEROL (60S ribosomal protein L26 n=7 Tax=Alveolata TaxID=33630 RepID=A0A7J6P5Z0_PEROL)

HSP 1 Score: 206 bits (523), Expect = 3.610e-65
Identity = 111/144 (77.08%), Postives = 124/144 (86.11%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDVNMAGVD 473
            MK +P VSSSRRKSRKAHFTAPS QRRIIMSA LSKEL+AKYNVRSVP+RKDDEVMVVRGHY +REGKVTACYR+K+VIHIER+TR+K NG+   +G+HPSKVVITKLK+DKDRK LLERK R SK    K  +EKDV MA VD
Sbjct:    1 MKFSPAVSSSRRKSRKAHFTAPSDQRRIIMSAPLSKELRAKYNVRSVPIRKDDEVMVVRGHYSDREGKVTACYRKKFVIHIERLTRDKVNGSHANVGVHPSKVVITKLKMDKDRKALLERKNR-SKDSGKKSYTEKDVAMAQVD 143
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BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A451FLG4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Eustigmatophyceae sp. Mont 10/10-1w TaxID=2506145 RepID=A0A451FLG4_9STRA)

HSP 1 Score: 202 bits (514), Expect = 9.000e-64
Identity = 107/145 (73.79%), Postives = 126/145 (86.90%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAK-KASEKDVNMAGVD 473
            MK NPNVSSSRRKSRKAHF+APSH RR++MSA LSK+LQAKY VRS+P+RK+DEV VVRG +KN +GKVT  YR+K+VIHI+R+TREKANGATV +GIHPSKVVITKLK++K RK +LERK RKS A  AK K +E DVN+AGVD
Sbjct:    1 MKFNPNVSSSRRKSRKAHFSAPSHMRRVLMSAPLSKDLQAKYKVRSMPIRKEDEVTVVRGRHKNSDGKVTQVYRKKFVIHIDRITREKANGATVNVGIHPSKVVITKLKMNKSRKAILERKARKSDADKAKGKFTEADVNLAGVD 145
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BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A3R5U3L5_9STRA (50S ribosomal protein L24, chloroplastic n=4 Tax=Eustigmatophyceae TaxID=5747 RepID=A0A3R5U3L5_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.170e-62
Identity = 107/145 (73.79%), Postives = 124/145 (85.52%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAK-KASEKDVNMAGVD 473
            +K NPNVSSSRRKSRK HFTAPSH RRIIMSA LSK+L+AKY VRS+P+RK+DEV VVRG +KNR+GKVT  YR+K+VIHI+RVTREKANGATV +GIHPSKV+ITKLKL+K RK +LERK R S A   K K +E DVN+AGVD
Sbjct:    2 VKFNPNVSSSRRKSRKQHFTAPSHVRRIIMSAPLSKDLRAKYKVRSIPIRKEDEVTVVRGSFKNRDGKVTQVYRKKFVIHIDRVTREKANGATVNVGIHPSKVIITKLKLNKSRKAILERKARTSAADKNKGKLTEADVNLAGVD 146
[Close]
BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A7S0HHD8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHD8_9EUKA)

HSP 1 Score: 198 bits (504), Expect = 5.720e-62
Identity = 108/145 (74.48%), Postives = 125/145 (86.21%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAK-KASEKDVNMAGVD 473
            MK + +VSSSRRKSRK HFTAPSH RRIIMS++LS EL+ KY+VRS+PVRKDDEV VVRG YK REGKV  CYR+K+VIH+ER+TREKA+GATVQ+GIHPSK VITKLKLDKDRK +L+RK R +K+ AAK K SEKDV MA VD
Sbjct:   21 MKYSTSVSSSRRKSRKDHFTAPSHMRRIIMSSALSSELRNKYHVRSMPVRKDDEVSVVRGTYKGREGKVIQCYRKKWVIHVERITREKASGATVQVGIHPSKCVITKLKLDKDRKSILDRKNRDTKSDAAKGKFSEKDVAMADVD 165
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BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A3R5QQN9_9STRA (50S ribosomal protein L24, chloroplastic n=2 Tax=Eustigmataceae TaxID=425071 RepID=A0A3R5QQN9_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.990e-60
Identity = 104/145 (71.72%), Postives = 121/145 (83.45%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDV-NMAGVD 473
            MK +PNVSSSRRKSRKAHFTAPSH RR++MSA LSKELQAK+ VRS+P+RKDDEV VVRG YKNR+GKV   YR+K+VIHI+R+TREKANGATV +GIHPSKVVITKLKL+K RK +L+RK RK       K +E DV N+ GVD
Sbjct:    1 MKFSPNVSSSRRKSRKAHFTAPSHVRRVLMSAPLSKELQAKHKVRSIPIRKDDEVTVVRGTYKNRDGKVVQVYRKKFVIHIDRITREKANGATVNVGIHPSKVVITKLKLNKSRKAILDRKARKPSDKGKGKFTEADVSNLGGVD 145
[Close]
BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A3R5QQQ1_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Pseudellipsoidion edaphicum TaxID=1431838 RepID=A0A3R5QQQ1_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.620e-59
Identity = 104/148 (70.27%), Postives = 126/148 (85.14%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAK-KASEKDV---NMAGVD 473
            +K +PNVSSSRRKSRKA+FTAPSH+RR+++SA LSK+LQAK+ VRS+P+RKDDEV VVRG YKNREGKVTA YR+K+VIHI+R+ REKANGATV +GIHPSKVVITKLK +K RK +LERK+R+S A   K K +E DV   N+ GVD
Sbjct:    2 VKFSPNVSSSRRKSRKAYFTAPSHERRVLLSAPLSKDLQAKHKVRSLPIRKDDEVTVVRGAYKNREGKVTAVYRKKFVIHIDRINREKANGATVNVGIHPSKVVITKLKTNKARKAILERKKRESAADKGKGKFTESDVADANLGGVD 149
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BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: F0YHH6_AURAN (50S ribosomal protein L24, chloroplastic n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHH6_AURAN)

HSP 1 Score: 189 bits (481), Expect = 7.450e-59
Identity = 107/144 (74.31%), Postives = 119/144 (82.64%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDVNMAGVD 473
            MK +  VSSSRRKSRK+HFTA S  RR IMSASLSKELQAKYNVRS+PVRKDDEVMVVRG YKNREGKVTACYRRK+VIH+ER+TR+KANGA V +GI PS  +ITKLKLDKDRK +L RK R SK GA + A     N+AGVD
Sbjct:    1 MKFSQAVSSSRRKSRKSHFTADSSSRRKIMSASLSKELQAKYNVRSIPVRKDDEVMVVRGIYKNREGKVTACYRRKFVIHVERITRDKANGAQVNVGIQPSNCIITKLKLDKDRKTILGRKDR-SKGGAVEGA-----NLAGVD 138
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BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A7S3HX90_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3HX90_9SPIT)

HSP 1 Score: 190 bits (482), Expect = 1.030e-58
Identity = 107/152 (70.39%), Postives = 123/152 (80.92%), Query Frame = 3 
Query:   18 PAGAAWGKMKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDVNMAGVD 473
            P  AA   MK +PNVSSSRRKSRKAHFTAPS  RRIIMSA+LS EL+ K+NVRS+PVRKDDEV VVRG YK REGKV  CYR+K+VIHI+R+TREK +GATVQ+GIHPSK VITKLKLDKDR+ +LERK + SKA   K  +E+D  M  VD
Sbjct:   11 PTAAA---MKFSPNVSSSRRKSRKAHFTAPSSVRRIIMSAALSSELRKKHNVRSMPVRKDDEVSVVRGTYKGREGKVIQCYRKKWVIHIDRITREKQSGATVQVGIHPSKCVITKLKLDKDRRAILERKDKTSKAKKGK-YTEQDAAMQDVD 158
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BLAST of jgi.p|Trimin1|58160 vs. uniprot
Match: A0A7S2C9Q4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9Q4_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.200e-58
Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 3 
Query:   42 MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVRKDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHPSKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDVNMAGVD 473
            MK +PNVSS R KSRKAHFTA S Q+R IMSASLSK+L +KYNVRS+P+RKDDEVMVVRG +KNREGKV   YR+KYVIHIERV+R+KANGA V IGIHPS  VITKLKLDKDRK +L+RK R     ++K  S+ DVNMAGVD
Sbjct:    1 MKFSPNVSSDRNKSRKAHFTASSSQKRKIMSASLSKDLVSKYNVRSMPIRKDDEVMVVRGSHKNREGKVIQVYRKKYVIHIERVSRDKANGAPVNIGIHPSNCVITKLKLDKDRKNILDRKDRSK--DSSKGLSDADVNMAGVD 142
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|58160 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVZ0_9STRA2.830e-90100.0050S ribosomal protein L24, chloroplastic n=1 Tax=T... [more]
A0A7J6P5Z0_PEROL3.610e-6577.0860S ribosomal protein L26 n=7 Tax=Alveolata TaxID=... [more]
A0A451FLG4_9STRA9.000e-6473.7950S ribosomal protein L24, chloroplastic n=1 Tax=E... [more]
A0A3R5U3L5_9STRA2.170e-6273.7950S ribosomal protein L24, chloroplastic n=4 Tax=E... [more]
A0A7S0HHD8_9EUKA5.720e-6274.48Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A3R5QQN9_9STRA1.990e-6071.7250S ribosomal protein L24, chloroplastic n=2 Tax=E... [more]
A0A3R5QQQ1_9STRA2.620e-5970.2750S ribosomal protein L24, chloroplastic n=1 Tax=P... [more]
F0YHH6_AURAN7.450e-5974.3150S ribosomal protein L24, chloroplastic n=1 Tax=A... [more]
A0A7S3HX90_9SPIT1.030e-5870.39Hypothetical protein (Fragment) n=1 Tax=Favella eh... [more]
A0A7S2C9Q4_9STRA1.200e-5872.2250S ribosomal protein L24, chloroplastic n=1 Tax=F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:574842..578259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|58160|CE58159_5087
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04131
KEGG ModuleM00177
KEGG Pathwayko03010,map03010
KEGG koko:K02898,ko:K18449,ko:K20068
GOsGO:0000075,GO:0000077,GO:0000184,GO:0000278,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009266,GO:0009314,GO:0009409,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009605,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010212,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010948,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022402,GO:0022613,GO:0022625,GO:0022626,GO:0023051,GO:0023052,GO:0023056,GO:0030330,GO:0030424,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031570,GO:0031571,GO:0031667,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032991,GO:0033036,GO:0033267,GO:0033365,GO:0033554,GO:0034248,GO:0034250,GO:0034470,GO:0034613,GO:0034641,GO:0034644,GO:0034645,GO:0034655,GO:0034660,GO:0035556,GO:0042254,GO:0042273,GO:0042594,GO:0042770,GO:0042788,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043516,GO:0043517,GO:0043603,GO:0043604,GO:0043679,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044306,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045047,GO:0045184,GO:0045202,GO:0045727,GO:0045786,GO:0045787,GO:0045930,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0070013,GO:0070727,GO:0070972,GO:0071156,GO:0071158,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071482,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090150,GO:0090304,GO:0097159,GO:0097458,GO:0098588,GO:0098793,GO:0098805,GO:0104004,GO:0120025,GO:0120038,GO:0150034,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902162,GO:1902164,GO:1902165,GO:1902167,GO:1902229,GO:1902231,GO:1902253,GO:1902255,GO:1902400,GO:1902402,GO:1902403,GO:1902531,GO:1902533,GO:1902806,GO:1902807,GO:1903047,GO:1904803,GO:1990904,GO:1990928,GO:2000045,GO:2000112,GO:2000134,GO:2001020,GO:2001022,GO:2001233,GO:2001235,GO:2001242,GO:2001244
Preferred nameRPL26
Descriptionregulation of translation involved in cellular response to UV
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0198@1|root,KOG3401@2759|Eukaryota
Evalue8.72e-60
Seed ortholog2880.D7G8N0
Hectar predicted targeting categoryother localisation
Ec32 ortholog description60S ribosomal protein L26
Ec32 orthologEc-22_002330.1
TranscriptId58482
TrackFilteredModels1
ProteinId58160
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|58160gene_5228Tribonema minus UTEX_B_3156 geneContig_32 574842..578259 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|58160Trimin1|58160|CE58159_5087Tribonema minus UTEX_B_3156 polypeptideContig_32 574943..578218 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5228_4exon_5228_4Tribonema minus UTEX_B_3156 exonContig_32 574842..575106 -
exon_5228_3exon_5228_3Tribonema minus UTEX_B_3156 exonContig_32 577051..577192 -
exon_5228_2exon_5228_2Tribonema minus UTEX_B_3156 exonContig_32 577631..577758 -
exon_5228_1exon_5228_1Tribonema minus UTEX_B_3156 exonContig_32 578218..578259 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_5228UTR3_5228Tribonema minus UTEX_B_3156 three_prime_UTRContig_32 574842..574942 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5228CDS_5228Tribonema minus UTEX_B_3156 CDSContig_32 578218..578218 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_5228UTR5_5228Tribonema minus UTEX_B_3156 five_prime_UTRContig_32 578219..578259 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5228 ID=mRNA_5228|Name=jgi.p|Trimin1|58160|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=577bp|location=Sequence derived from alignment at Contig_32:574842..578259- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGAGGCTTCACCACTTTCCAGCAGGAGCGGCCTGGGGCAAGATGAAGGTC
AACCCCAATGTGTCGTCCTCGCGGCGCAAGAGCCGCAAGGCTCACTTCAC
GGCGCCCTCCCACCAGAGGCGGATCATCATGTCCGCCTCCCTGTCCAAGG
AGCTCCAGGCCAAGTACAACGTGCGGTCGGTGCCCGTGCGGAAGGACGAC
GAGGTGATGGTGGTGCGGGGGCACTACAAGAACCGCGAGGGCAAGGTGAC
GGCGTGCTACCGGAGGAAGTACGTGATCCACATTGAGCGCGTCACGCGCG
AGAAGGCCAATGGCGCGACGGTCCAGATCGGCATCCACCCCTCCAAGGTC
GTCATCACCAAGCTGAAGCTCGACAAGGACCGCAAGGAGCTGCTCGAGCG
CAAGCAGCGCAAGAGCAAGGCCGGCGCCGCCAAGAAGGCGTCTGAGAAGG
ACGTCAACATGGCGGGCGTCGACTAAGCCCCCCCCCTGCTGTGTCTCACA
GTTCGCCATACGTCCTCGTGGGGGGTGGGGGTGTACCCGGCCCGGCCGCT
CTTGAATAAACCGCTTTGCTGAGCGCA
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protein sequence of jgi.p|Trimin1|58160

>Trimin1|58160|CE58159_5087 ID=Trimin1|58160|CE58159_5087|Name=jgi.p|Trimin1|58160|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=145bp
MKVNPNVSSSRRKSRKAHFTAPSHQRRIIMSASLSKELQAKYNVRSVPVR
KDDEVMVVRGHYKNREGKVTACYRRKYVIHIERVTREKANGATVQIGIHP
SKVVITKLKLDKDRKELLERKQRKSKAGAAKKASEKDVNMAGVD*
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mRNA from alignment at Contig_32:574842..578259-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5228 ID=mRNA_5228|Name=jgi.p|Trimin1|58160|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3418bp|location=Sequence derived from alignment at Contig_32:574842..578259- (Tribonema minus UTEX_B_3156 )
GGAGGCTTCACCACTTTCCAGCAGGAGCGGCCTGGGGCAAGAGTGAGTGA
ATAGCGTGAGACGACTACCTCATGTGTTGCTTCTGATACGTCCTGCGGGC
AGCTCGATGGATGCGGCGCTTAGGCTTAGCGGATGGCCATTTGATTTGGT
TGCGATGCTGGCCTAATCGATGCTGCTGGAGGCGCAAGGCGCGGCGCAGC
TGGGATGGTCGCTCGATGCAGTTGGTGGAACTCTCGAAGCTGCGCACACA
GCGGACTGCCAGCAGCTGCATTAGAGTCGCATCTCAAATAGCCAGGGGCT
GGCGGCACAGAGAGTAGCACCTGGCAGCACCTCGCGCTTGCGTCCTGGCG
TCCTGGCAGTGGTCCTGTTGACTTTGCAATGAAATATCTGCAGATACTCA
TGTACGAAAAGCTGTGTAAATCCAATGCCCCTATGCTGGTCGGCGTCATT
GGGGCCTGACTTTGCGCGGTTTGTGCTCGCTGCTGTGCTTGCGTCCAACA
GTGAAGGTCAACCCCAATGTGTCGTCCTCGCGGCGCAAGAGCCGCAAGGC
TCACTTCACGGCGCCCTCCCACCAGAGGCGGATCATCATGTCCGCCTCCC
TGTCCAAGGAGCTCCAGGCCAAGTACAACGTGAGTGCCGGGATTAGTGCA
TCAACAGCTAGCGACCGCAATAGGTAGACGGATGTTTCCTGCATCTGCCA
ACACACTTGCAGTTATCTTGGCTCAGTGCAGCGCAGAAAATGGTTGTCAG
CGTTTGATTGCTGTTGGCCGTCGGCAGGTCGCTGCACCTCTTTTGACCCA
GGACCATGGCTCAAGCGGGCTACACACAGGGTAGAGCTGTGCGCGCATCC
TCTTTATGCCTCTGCCATCCACTTACCGCATCGATTCAGGCACAGCGTAT
AACACACGGCGCAATCCGCATGTCCCCCCACCCCCCCATTTCGTCGACGT
GACTCGGCCAATCTGCCCACAAGCACCTGCCTGCGCCAGTTGCGCCACTG
CACTGATCCGTCCGCAAGCACCTGCCCACCCTCACCTTGCTCGCGCGCTC
ATCCCGCCGCGGAGCAGGTGCGGTCGGTGCCCGTGCGGAAGGACGACGAG
GTGATGGTGGTGCGGGGGCACTACAAGAACCGCGAGGGCAAGGTGACGGC
GTGCTACCGGAGGAAGTACGTGATCCACATTGAGCGCGTCACGCGCGAGA
AGGCCAATGGTGAGCACTGCTGCAACCTTGCTGTTAAGATCATTGTATAT
CATGACCCGTGGTGTCCTGCATCCGCGTCACAGAGTTTATGGGCACAACT
TTGTGGTATCAGCAGTATCGCGGATGGGGAAGTGCGTCGTTCGCAGTGAG
CAGATCACTGGCATCATGTTCAACAGGCGAATCATGCTGTTGCGTTTTTA
CGCAACCTGGACACTATCACACATTCCAAGCGCGTCAGGGGTTTTGGCTT
GACGTACTGCAGTGCAAGTGCTGCAGATTACACGCGCTCTGTGTGTATGT
ATGGCGTTTGTCCGTACGAAGGAGCCCAGCGGTCAGAGCCGCTGCTTCTA
AATAGCTCTGCAGCCATCAACGCTCAGCATGTTTCACACCGACATTGAGG
CGAAATGAGGTGTCAGTGCGTGCACGTTGCGCAGTGCGTCAGATCGTCCA
CGCACATCCATTGTAGGCACCTAGCGCAATGCTGAAGCTCAAGGGTGCAA
TGCCCGTGATTGCTGGCCACAGAGAGTGCCGATGGAGCGCTCAATTGGAA
ACGTAAGGGCTGGATTAGCCATGACAACAACACTCTTGCAAATCGCCGTG
TCGTCACGTGCTCAAAGGTCTCACCAATTCGGTGTTGGCAGTGACCCTGC
CCAAGCGCACTCGCTGCGCACACTCGCGGCAACGCTCCGCAATGCCACAA
ACTGAAGTTGCCGTTGAGGGACCTCAGACCTCAAGGTCTTGTTGCTGCTG
CTGGCCACACAGCAGTTACACATACACATCTGTAACCGCTGGCGGTTGTG
CCAGCGCCCACCAGGCACAACACCTCACAACAAAGTTGCTGCTCACCTCA
CGCAAGCGCCCGGTGGTCGCGTTGAGGGTGATATCAGTAGGGTCGCAGCA
GTACAGTCGAGGGTGTCGGATTGTCGCTGGGCATTCAAAAAATTTCATTC
CACAAAGAACAAATAAACTAGCCAAAATAGCATCTCTAAGTGAATCATCA
CCCACGAACACAAAGGTGGAAGGGAGCCAGGCTCTTTTGAAGTGCCTCTC
GTCCCTGGTCACCTAACATGTGCGCTGAGGGCGGCATTAGCAGGTGTGGA
ACAATGAAGTCAATGGACACCGGATGGCCGCAGGAAGTGACGTTCTGCTG
GAGCGTCACAACAAATTGAAGTCAATGCACGCTATCTTCAACATTGTCAA
ATGAGTGCATTTAAGTGCCATTGTGAAGCACGTGCATGTGTACTACGCAC
TGACCTCAAGATGAAGGGAGAGCATGTGCACATGTGATTCTTCGTAAGCT
CAATGTCGAACTTCAACTCTGGCCTCGTGCGCTTGGAGACTGCATTACAA
CGATAGTAATGTCTGGGTATGCTGACAGCTTGCATCTACATGCATCAATT
TCTGGGCACACTGACAGCTCGCAGAGCTCCAAGTGCCTCTCACTGAGGCC
ATCTGCCATGCACGTGCTGTGCGCCCTGCTGGCTTGACCAGCACCACCCA
CACGCCTACTGCACGTTGCCTACATATGTGCAGCAGGCGCGGCCGCCCAT
GCCCATGGTACCTTTGATGAGCAACGATGAACTACATTCACTTCAAGAGT
GTCGGTTTGAAGTTTCCAATAACGACAATCAGCGACTCTGACGGGTATGC
TGATTGCTTGAAGATCTGATCTGAACATCAGCCTTGGTGTTGGTATGCTG
CTGTAAAGTCCTGGTCAAGCCTGGTGCTGCATCTTCAATGGAAGCGCCTG
CGAGGTCCCGCTAATCTTCACTTCACGTTCAATCGTGATGCCCCAACACC
CCCCCCCCCCCCCTCCCCCCCAGGCGCGATGGTCCAGATCAGCATCCGCC
CCTCCAAGATGTTGTAAAGCCCTGGTTCAAAGCTCATTACTTCATCTTCA
ATAGTGACGGCCCCCCCCCCCCCCCCCCCCCCCCCCTGCGTTGCCCCTTT
CAGGCGCGACGGTCCAGATCGGCATCCACCCCTCCAAGGTCGTCATCACC
AAGCTGAAGCTCGACAAGGACCGCAAGGAGCTGCTCGAGCGCAAGCAGCG
CAAGAGCAAGGCCGGCGCCGCCAAGAAGGCGTCTGAGAAGGACGTCAACA
TGGCGGGCGTCGACTAAGCCCCCCCCCTGCTGTGTCTCACAGTTCGCCAT
ACGTCCTCGTGGGGGGTGGGGGTGTACCCGGCCCGGCCGCTCTTGAATAA
ACCGCTTTGCTGAGCGCA
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Coding sequence (CDS) from alignment at Contig_32:574842..578259-

>mRNA_5228 ID=mRNA_5228|Name=jgi.p|Trimin1|58160|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=435bp|location=Sequence derived from alignment at Contig_32:574842..578259- (Tribonema minus UTEX_B_3156 )
ATGAAGGTCAACCCCAATGTGTCGTCCTCGCGGCGCAAGAGCCGCAAGGC
TCACTTCACGGCGCCCTCCCACCAGAGGCGGATCATCATGTCCGCCTCCC
TGTCCAAGGAGCTCCAGGCCAAGTACAACGTGCGGTCGGTGCCCGTGCGG
AAGGACGACGAGGTGATGGTGGTGCGGGGGCACTACAAGAACCGCGAGGG
CAAGGTGACGGCGTGCTACCGGAGGAAGTACGTGATCCACATTGAGCGCG
TCACGCGCGAGAAGGCCAATGGCGCGACGGTCCAGATCGGCATCCACCCC
TCCAAGGTCGTCATCACCAAGCTGAAGCTCGACAAGGACCGCAAGGAGCT
GCTCGAGCGCAAGCAGCGCAAGAGCAAGGCCGGCGCCGCCAAGAAGGCGT
CTGAGAAGGACGTCAACATGGCGGGCGTCGACTAA
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