Trimin1|354631|estExt_Genemark1.C_Ctg_3010004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354631
Unique NameTrimin1|354631|estExt_Genemark1.C_Ctg_3010004
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length930
Homology
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA)

HSP 1 Score: 1617 bits (4188), Expect = 0.000e+0
Identity = 851/958 (88.83%), Postives = 867/958 (90.50%), Query Frame = 0
Query:    1 MDIDDFDLRAAENGFIDDEEPPEXXXXXXXXXXXXXXXXXXXXXXXPSPKRNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPF--NADHPLALTAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKITCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAKSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGATTG-----------------GDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVDPQLQDLEPHLEAARAXXXXXXXXXXXXXXXXXELTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGGY 929
            MDIDDFDLRAAENGFI DEEPPE           XXXXX       PSPKRNTSYARQK+QQY  PSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLP+DAETRLR DIDVEVP+  NADHPLALT AVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHG+KITCSDIKCTHKDMLG+RQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGY TVAVM         GGDLHDLSFAELLRA SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIR GTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFG   G                 GDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYV+P+LQ+LEP+LEAA AXXXXXXXXXXXXXXXXXEL  L+AKAASLFAIKESIKGTSKREAILKDVFST+RDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SAR+GKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR            G  +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP          AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNN RARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQ N KCVYAGLKSAGGY
Sbjct:   52 MDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAPR---PSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVM---------GGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA)

HSP 1 Score: 691 bits (1782), Expect = 1.600e-241
Identity = 350/366 (95.63%), Postives = 355/366 (96.99%), Query Frame = 0
Query:  548 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 903
            KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSAR+GKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP          AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK
Sbjct:    1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.820e-49
Identity = 138/385 (35.84%), Postives = 194/385 (50.39%), Query Frame = 0
Query:  554 VRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAK-FRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAG 927
            VRD+ F  LLD +KD+ S  +GVV+L TATLRPRVR D L  A++  ++ + P +  + + + D+TL+   RL RP  LE + R++GYSITGH REEIIV  +G  A S KG++  LL  VL  ++Y AP+S +       AGAASS M AL G R+  +DE+P     D Q  + ++GGA I  REL+  Q SF        N N    ++   A L+RI   P D +       +    D  +  H + + K++ +L            AK+WYE GLG  P CC         DN  +  WI + CE+G  EG      L +S    +N++ A + P    I       +M  +GF      R   +Q   K    GLK AG
Sbjct:   11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANS-KGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGFHIAQATR---TQLRDKRCCHGLKIAG 379          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM)

HSP 1 Score: 109 bits (272), Expect = 7.000e-21
Identity = 116/451 (25.72%), Postives = 181/451 (40.13%), Query Frame = 0
Query:  434 ETEEDLLFGATTGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVA--------------AYVDPQLQDLEPHLEAARAXXXXXXXXXXXXXXXXXELTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDY--NADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCS 867
            +   DLL G      G   RF    +K  LW   Y       +I +L A              A +   LQ +   L A  A                     LE ++  L  +   ++GT+KR  +L      V     +  LD    + +  NG V+L T  LRP  R D+LT  V I Y  NA +P            T           L++ + R +GYS+TG VRE++++   G  + +GK +  ++L+++LG +  QA    L A K        + +    G R++   E   G   +  ++K ++GG  I  R +      F+PT   W +TN  P IK  + AI +RI +IP + KF   G+ +   D   +        L   +     W   GLG+  A  + A   +  + D L +WI + C +G R  A  A +  S
Sbjct:   82 DANADLLLGL----HGADIRFCPPWDKWLLWSGSYWQIDNRLDIERLAADVPKVIRKRAIDLTAELQSLLQKMAELLAAINADPSRARLLTQERARLLERKLKLEDESEWLIKLASKLEGTAKRSCMLLATRHKVVIHHSD--LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPRKNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B)

HSP 1 Score: 108 bits (271), Expect = 1.440e-20
Identity = 97/302 (32.12%), Postives = 142/302 (47.02%), Query Frame = 0
Query:  563 LDVNKDIFSCQNGVVELATATLRPRVRKDML-TRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPA 862
            LD N  +    NGVV+L T  L P  R DML TR    DY+  +   P  +Q L ++           A +  + R LGY++TG   EEIIVF +G  A +GK I  +++ +++G     AP S L   +    G      M L GAR+V ++ELPAG+ +D Q +K ++G   IS REL+    +F P    W  TN  PIIK +   I +RI ++P   KF      K       K    +N  LR  +  A+++   G              + +D+D L  ++ D C +     ADPA
Sbjct:  450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKH---LEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLAD-CTI-----ADPA 732          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM)

HSP 1 Score: 105 bits (262), Expect = 1.860e-19
Identity = 83/315 (26.35%), Postives = 144/315 (45.71%), Query Frame = 0
Query:  563 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGE-------KPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSA 869
            LD  + + + +NG ++L+  TLR   R D+LT    I Y  D+   P   + L+++     +      L+  + R +GYS+TG VRE++++   G  + +GK +  ++++++LG +  QA    L A +        + +    G R+V   E   G   +  ++K ++GG  I+ R +F    +F PT   W +TN  P I+  + AI +RI +IP + KF  PG+ +   D           KL + +P    W   G  +        P   K A   +  + D L +W+ D C +     A  A +  S A
Sbjct:  444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMPGIMAWAVRGCLDWQREGLRAPEAVKAATANYQQEQDVLAAWLADCCIVKRTADAKAADLYGSYA 741          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI001FB9F2E6 (phage/plasmid primase, P4 family n=1 Tax=Ligilactobacillus sp. AF129 TaxID=2886039 RepID=UPI001FB9F2E6)

HSP 1 Score: 105 bits (261), Expect = 2.260e-19
Identity = 79/301 (26.25%), Postives = 152/301 (50.50%), Query Frame = 0
Query:  554 VRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGR---SARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWIND 849
            V D +F++      +I +  +G+V+L++ +++P   +D++T++ N + +      P   + + DI  +       P L+E + +++GY+ITG V E++ VFLLG+   +  +GK ++  +L+Q+LG          +T  K  ++ + + + +A  +GAR++   E+  G  L   M+K ++GG  I+ + L+    SF+PT   W ++N  PII   +  I +R+  IP  AK       K P+   DK    K   +   +  A ++   G+ + P       D +  D D + ++IND
Sbjct:  429 VDDSEFDR----KTNIINTPSGIVDLSSGSIKPATTEDLVTKSTNAEIS--EIETPIFDKFMLDIFPS------HPELIELVQKLIGYTITGTVAEQLTVFLLGKGNENGANGKSVLVEVLRQILGDYAVSIQPETITYSKTTNSSSNTDNQIADTKGARMIATSEIERGAKLSESMLKRLTGGEMITAKRLYEKPISFTPTGTLWMSSNYKPIISGTDNGIWRRLVFIPMTAKITK----KDPH-LKDKLMTEKAGIMNWIIEGALKYQRDGI-QLPKIITNEVDEYREDMDDVATFIND 711          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A257JK46_9PROT (SF3 helicase domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium PA3 TaxID=2015571 RepID=A0A257JK46_9PROT)

HSP 1 Score: 103 bits (258), Expect = 2.390e-19
Identity = 102/374 (27.27%), Postives = 168/374 (44.92%), Query Frame = 0
Query:  563 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREH-------LPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGG 928
            LD    +    NGVV+L    L P      +TR    D++  S + P  ++ L  +       ++   LL      LGY++TG+  EEI++F +G  A +GK I  +++  +LG     AP   L + +    G  +   M L GAR+V ++ELPAG+ LD Q++K ++G   IS R L     ++ P   PW  TN  PI+K +   I +RI I+P    F            +++   ++   LRE        +  A+R+   GL   PA  K     +  D+D L  ++  EC       A  A +   + F  + N+   ++  + P  K+   +++  +GF   D         N K  Y GL+++GG
Sbjct:  195 LDAKPLLLGVGNGVVDLRRKRLLPNEPGYFITRYCYADFDP-SAQCPSWLRSLDAMFQGDTATIDAVQLL------LGYTLTGYSTEEIMIFCVGFGA-NGKSIFGNVVAAILGDYSRTAPSQLLASRRTDDHGPRNDMAM-LDGARLVSINELPAGMHLDEQVVKQLAGREPISARFLHKEYFTYEPRFTPWVRTNHKPIVKGDDEGIWRRIVILPFRRTFAP----------HEQDPHLEGKLLRERDGILAWMVEGAQRYLREGLKLSPAM-KRELAQYRTDSDMLGEFLA-ECTAT----ATGARVEQKTLFLSWQNWC--KDNGVQPGSKKTFTQRLKERGFPPKDS--------NGKRYYQGLRTSGG 533          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI0003455EE6 (phage/plasmid primase, P4 family n=2 Tax=unclassified Pandoraea TaxID=2624094 RepID=UPI0003455EE6)

HSP 1 Score: 104 bits (260), Expect = 3.010e-19
Identity = 89/319 (27.90%), Postives = 146/319 (45.77%), Query Frame = 0
Query:  564 DVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLR-ILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFY-QAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAE-PAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 879
            D +  +    NGVV+L T   R    +DM+T   +  ++  + R P+    L  +   AP+R+     L R LR +LGYS+TG ++E+   F+LGR + +GKG +   ++ V+G  +  Q   SFL      +A   +  +MAL+  R++   E      +D    K ++GG  +SGR  +G   SF P      +TNEMP    E  A+ +R+ +IP   KF     A    D +DK     +  L   +  A  + + G   + A  + A        D+++ WI+ EC+  +        I    AF  Y+ +  R
Sbjct:  449 DTDPYLLGVPNGVVDLRTKEFRAGRPQDMITCTTDAKFDPTA-RCPQFAAFLQSV---APDRV-----LRRFLRSVLGYSMTGLIKEQKAFFMLGRGS-NGKGTLTRAIENVVGPFYSGQMSPSFLKGANKGNANGPTPALMALQRPRILFCTESERRGGIDEPFFKQLTGGDQVSGRHNYGETESFRPRGKLLLSTNEMPDWDRENDALWRRVMVIPFTQKF---SGASRDNDLDDKLATEASGILNWLIAGASDYLQAGRLPRCAQVEAATSDARTRADSVRMWIDAECKRSAN-----GKIAAQDAFDAYSRFTGR 749          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A1Y1IMX7_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMX7_KLENI)

HSP 1 Score: 103 bits (257), Expect = 7.930e-19
Identity = 100/371 (26.95%), Postives = 161/371 (43.40%), Query Frame = 0
Query:  536 SIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRI-LGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAV---SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMP-IIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAK--------------RWYEGG--------LGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 879
            ++    +  A L  V S + D +  KL+D + D   C NGV++L T  L       + TR+  + Y   S         + D+        N    + R L++ LGY++TGH  EEI     G  + +GK  ++  LQ+  G   Y  P S     KA    + GAASSH++AL+GAR+   DE      +++  IK ++GG  ++ RELF    SF PT      TN  P I  A+  +L+R+ ++P    FR         D ND     ++T L+  L +++               WY           L   PA    A D +  + D ++ ++ + C++G    A  A +L        ++ +AR
Sbjct:  502 NVNSPKEARACLDYVTSVLYDPEMIKLMDCDIDSVGCPNGVLDLRTGILSFAHPSQLCTRSTGVRYMGLSHNTDRFDAFVMDL-------FNSDESIVRWLQLFLGYALTGHTSEEIFCIWYGAGS-NGKSALKMALQKAFGS--YYTPMSKDCIIKAGGKRAEGAASSHLVALKGARLALCDESEESQVINSACIKEMTGGGAVTCRELFQKCESFVPTHANVLLTNHKPSIADADGGLLRRVSLLP----FRNSYKVAEEVDPNDPHSKPQSTHLKTWLESSEGAEECLVWVVRGSVEWYARQSANPAAKVLAPLPAPMAAAFDEYLREFDDMRMFLKEFCDIGPTFVAPSADLLARFNAEMNSDLKAR 858          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YS19_9STRA0.000e+088.83D5_N domain-containing protein n=5 Tax=Tribonema m... [more]
A0A835Z1H9_9STRA1.600e-24195.63SF3 helicase domain-containing protein (Fragment) ... [more]
A0A835Z1L1_9STRA1.820e-4935.84D5_N domain-containing protein n=1 Tax=Tribonema m... [more]
A0A3D2VPM9_9GAMM7.000e-2125.72SF3 helicase domain-containing protein n=1 Tax=Can... [more]
UPI000AB7246B1.440e-2032.12Uncharacterized protein n=2 Tax=Croceicoccus mobil... [more]
A0A3C1SNC0_9GAMM1.860e-1926.35SF3 helicase domain-containing protein n=1 Tax=Can... [more]
UPI001FB9F2E62.260e-1926.25phage/plasmid primase, P4 family n=1 Tax=Ligilacto... [more]
A0A257JK46_9PROT2.390e-1927.27SF3 helicase domain-containing protein (Fragment) ... [more]
UPI0003455EE63.010e-1927.90phage/plasmid primase, P4 family n=2 Tax=unclassif... [more]
A0A1Y1IMX7_KLENI7.930e-1926.95SF3 helicase domain-containing protein n=1 Tax=Kle... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 499..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availablePANTHERPTHR35372ATP BINDING PROTEIN-RELATEDcoord: 529..857
IPR014818Bacteriophage/plasmid primase, P4, C-terminalPFAMPF08706D5_Ncoord: 505..617
e-value: 1.5E-12
score: 48.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_301contigContig_301:30123..32981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354631mRNA_18775Tribonema minus UTEX_B_3156 mRNAContig_301 30123..33160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354631|estExt_Genemark1.C_Ctg_3010004 ID=Trimin1|354631|estExt_Genemark1.C_Ctg_3010004|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=930bp
MDIDDFDLRAAENGFIDDEEPPEEPPMPLATPPAAAPAAPCAPPARPSPK
RNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETF
FTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPFNADHPLAL
TAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKI
TCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYEN
NGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAK
SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNK
LTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPECA
GSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGATTGGDGD
KARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVDPQLQDLEPHLEAAR
AAARTRSRAEEEDEEADEELTVLEAKAASLFAIKESIKGTSKREAILKDV
FSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNID
YNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREE
IIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASS
HMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSP
TAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTH
FIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDE
CELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKG
FAKIDDYRKAHSQYNLKCVYAGLKSAGGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014818Phage/plasmid_primase_P4_C