mRNA_18775 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354631
Unique NamemRNA_18775
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA)

HSP 1 Score: 1627 bits (4213), Expect = 0.000e+0
Identity = 858/986 (87.02%), Postives = 878/986 (89.05%), Query Frame = 3
Query:  111 SFPIKLITSSQPH-----FFCCPHSKAGMDIDDFDLRAAENGFIDDEEPPEXXXXXXXXXXXXXXXXXXXXXXXPSPKRNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPF--NADHPLALTAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKITCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAKSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGATTG-----------------GDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVDPQLQDLEPHLEAARAXXXXXXXXXXXXXXXXXELTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGGY 2966
            S+PI   +    H     FF  P  ++ MDIDDFDLRAAENGFI DEEPPE           XXXXX       PSPKRNTSYARQK+QQY  PSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLP+DAETRLR DIDVEVP+  NADHPLALT AVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHG+KITCSDIKCTHKDMLG+RQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGY TVAVM         GGDLHDLSFAELLRA SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIR GTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFG   G                 GDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYV+P+LQ+LEP+LEAA AXXXXXXXXXXXXXXXXXEL  L+AKAASLFAIKESIKGTSKREAILKDVFST+RDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SAR+GKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR            G  +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP          AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNN RARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQ N KCVYAGLKSAGGY
Sbjct:   24 SYPIGKFSHQTDHVISTTFFLLPSFESSMDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAPR---PSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVM---------GGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA)

HSP 1 Score: 691 bits (1782), Expect = 1.080e-240
Identity = 350/366 (95.63%), Postives = 355/366 (96.99%), Query Frame = 3
Query: 1821 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 2888
            KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSAR+GKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP          AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK
Sbjct:    1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.350e-49
Identity = 138/385 (35.84%), Postives = 194/385 (50.39%), Query Frame = 3
Query: 1839 VRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAK-FRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAG 2960
            VRD+ F  LLD +KD+ S  +GVV+L TATLRPRVR D L  A++  ++ + P +  + + + D+TL+   RL RP  LE + R++GYSITGH REEIIV  +G  A S KG++  LL  VL  ++Y AP+S +       AGAASS M AL G R+  +DE+P     D Q  + ++GGA I  REL+  Q SF        N N    ++   A L+RI   P D +       +    D  +  H + + K++ +L            AK+WYE GLG  P CC         DN  +  WI + CE+G  EG      L +S    +N++ A + P    I       +M  +GF      R   +Q   K    GLK AG
Sbjct:   11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANS-KGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGFHIAQATR---TQLRDKRCCHGLKIAG 379          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM)

HSP 1 Score: 109 bits (272), Expect = 7.810e-21
Identity = 116/451 (25.72%), Postives = 181/451 (40.13%), Query Frame = 3
Query: 1479 ETEEDLLFGATTGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVA--------------AYVDPQLQDLEPHLEAARAXXXXXXXXXXXXXXXXXELTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDY--NADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCS 2780
            +   DLL G      G   RF    +K  LW   Y       +I +L A              A +   LQ +   L A  A                     LE ++  L  +   ++GT+KR  +L      V     +  LD    + +  NG V+L T  LRP  R D+LT  V I Y  NA +P            T           L++ + R +GYS+TG VRE++++   G  + +GK +  ++L+++LG +  QA    L A K        + +    G R++   E   G   +  ++K ++GG  I  R +      F+PT   W +TN  P IK  + AI +RI +IP + KF   G+ +   D   +        L   +     W   GLG+  A  + A   +  + D L +WI + C +G R  A  A +  S
Sbjct:   82 DANADLLLGL----HGADIRFCPPWDKWLLWSGSYWQIDNRLDIERLAADVPKVIRKRAIDLTAELQSLLQKMAELLAAINADPSRARLLTQERARLLERKLKLEDESEWLIKLASKLEGTAKRSCMLLATRHKVVIHHSD--LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPRKNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B)

HSP 1 Score: 108 bits (271), Expect = 1.620e-20
Identity = 97/302 (32.12%), Postives = 142/302 (47.02%), Query Frame = 3
Query: 1866 LDVNKDIFSCQNGVVELATATLRPRVRKDML-TRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPA 2765
            LD N  +    NGVV+L T  L P  R DML TR    DY+  +   P  +Q L ++           A +  + R LGY++TG   EEIIVF +G  A +GK I  +++ +++G     AP S L   +    G      M L GAR+V ++ELPAG+ +D Q +K ++G   IS REL+    +F P    W  TN  PIIK +   I +RI ++P   KF      K       K    +N  LR  +  A+++   G              + +D+D L  ++ D C +     ADPA
Sbjct:  450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKH---LEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLAD-CTI-----ADPA 732          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM)

HSP 1 Score: 105 bits (262), Expect = 2.090e-19
Identity = 83/315 (26.35%), Postives = 144/315 (45.71%), Query Frame = 3
Query: 1866 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGE-------KPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSA 2786
            LD  + + + +NG ++L+  TLR   R D+LT    I Y  D+   P   + L+++     +      L+  + R +GYS+TG VRE++++   G  + +GK +  ++++++LG +  QA    L A +        + +    G R+V   E   G   +  ++K ++GG  I+ R +F    +F PT   W +TN  P I+  + AI +RI +IP + KF  PG+ +   D           KL + +P    W   G  +        P   K A   +  + D L +W+ D C +     A  A +  S A
Sbjct:  444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMPGIMAWAVRGCLDWQREGLRAPEAVKAATANYQQEQDVLAAWLADCCIVKRTADAKAADLYGSYA 741          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI001FB9F2E6 (phage/plasmid primase, P4 family n=1 Tax=Ligilactobacillus sp. AF129 TaxID=2886039 RepID=UPI001FB9F2E6)

HSP 1 Score: 105 bits (261), Expect = 2.530e-19
Identity = 79/301 (26.25%), Postives = 152/301 (50.50%), Query Frame = 3
Query: 1839 VRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGR---SARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWIND 2726
            V D +F++      +I +  +G+V+L++ +++P   +D++T++ N + +      P   + + DI  +       P L+E + +++GY+ITG V E++ VFLLG+   +  +GK ++  +L+Q+LG          +T  K  ++ + + + +A  +GAR++   E+  G  L   M+K ++GG  I+ + L+    SF+PT   W ++N  PII   +  I +R+  IP  AK       K P+   DK    K   +   +  A ++   G+ + P       D +  D D + ++IND
Sbjct:  429 VDDSEFDR----KTNIINTPSGIVDLSSGSIKPATTEDLVTKSTNAEIS--EIETPIFDKFMLDIFPS------HPELIELVQKLIGYTITGTVAEQLTVFLLGKGNENGANGKSVLVEVLRQILGDYAVSIQPETITYSKTTNSSSNTDNQIADTKGARMIATSEIERGAKLSESMLKRLTGGEMITAKRLYEKPISFTPTGTLWMSSNYKPIISGTDNGIWRRLVFIPMTAKITK----KDPH-LKDKLMTEKAGIMNWIIEGALKYQRDGI-QLPKIITNEVDEYREDMDDVATFIND 711          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A257JK46_9PROT (SF3 helicase domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium PA3 TaxID=2015571 RepID=A0A257JK46_9PROT)

HSP 1 Score: 103 bits (258), Expect = 2.640e-19
Identity = 102/374 (27.27%), Postives = 168/374 (44.92%), Query Frame = 3
Query: 1866 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREH-------LPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGG 2963
            LD    +    NGVV+L    L P      +TR    D++  S + P  ++ L  +       ++   LL      LGY++TG+  EEI++F +G  A +GK I  +++  +LG     AP   L + +    G  +   M L GAR+V ++ELPAG+ LD Q++K ++G   IS R L     ++ P   PW  TN  PI+K +   I +RI I+P    F            +++   ++   LRE        +  A+R+   GL   PA  K     +  D+D L  ++  EC       A  A +   + F  + N+   ++  + P  K+   +++  +GF   D         N K  Y GL+++GG
Sbjct:  195 LDAKPLLLGVGNGVVDLRRKRLLPNEPGYFITRYCYADFDP-SAQCPSWLRSLDAMFQGDTATIDAVQLL------LGYTLTGYSTEEIMIFCVGFGA-NGKSIFGNVVAAILGDYSRTAPSQLLASRRTDDHGPRNDMAM-LDGARLVSINELPAGMHLDEQVVKQLAGREPISARFLHKEYFTYEPRFTPWVRTNHKPIVKGDDEGIWRRIVILPFRRTFAP----------HEQDPHLEGKLLRERDGILAWMVEGAQRYLREGLKLSPAM-KRELAQYRTDSDMLGEFLA-ECTAT----ATGARVEQKTLFLSWQNWC--KDNGVQPGSKKTFTQRLKERGFPPKDS--------NGKRYYQGLRTSGG 533          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI0003455EE6 (phage/plasmid primase, P4 family n=2 Tax=unclassified Pandoraea TaxID=2624094 RepID=UPI0003455EE6)

HSP 1 Score: 104 bits (260), Expect = 3.370e-19
Identity = 89/319 (27.90%), Postives = 146/319 (45.77%), Query Frame = 3
Query: 1869 DVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLR-ILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFY-QAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAE-PAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 2816
            D +  +    NGVV+L T   R    +DM+T   +  ++  + R P+    L  +   AP+R+     L R LR +LGYS+TG ++E+   F+LGR + +GKG +   ++ V+G  +  Q   SFL      +A   +  +MAL+  R++   E      +D    K ++GG  +SGR  +G   SF P      +TNEMP    E  A+ +R+ +IP   KF     A    D +DK     +  L   +  A  + + G   + A  + A        D+++ WI+ EC+  +        I    AF  Y+ +  R
Sbjct:  449 DTDPYLLGVPNGVVDLRTKEFRAGRPQDMITCTTDAKFDPTA-RCPQFAAFLQSV---APDRV-----LRRFLRSVLGYSMTGLIKEQKAFFMLGRGS-NGKGTLTRAIENVVGPFYSGQMSPSFLKGANKGNANGPTPALMALQRPRILFCTESERRGGIDEPFFKQLTGGDQVSGRHNYGETESFRPRGKLLLSTNEMPDWDRENDALWRRVMVIPFTQKF---SGASRDNDLDDKLATEASGILNWLIAGASDYLQAGRLPRCAQVEAATSDARTRADSVRMWIDAECKRSAN-----GKIAAQDAFDAYSRFTGR 749          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A1Y1IMX7_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMX7_KLENI)

HSP 1 Score: 103 bits (257), Expect = 8.880e-19
Identity = 100/371 (26.95%), Postives = 161/371 (43.40%), Query Frame = 3
Query: 1785 SIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRI-LGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAV---SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMP-IIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAK--------------RWYEGG--------LGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 2816
            ++    +  A L  V S + D +  KL+D + D   C NGV++L T  L       + TR+  + Y   S         + D+        N    + R L++ LGY++TGH  EEI     G  + +GK  ++  LQ+  G   Y  P S     KA    + GAASSH++AL+GAR+   DE      +++  IK ++GG  ++ RELF    SF PT      TN  P I  A+  +L+R+ ++P    FR         D ND     ++T L+  L +++               WY           L   PA    A D +  + D ++ ++ + C++G    A  A +L        ++ +AR
Sbjct:  502 NVNSPKEARACLDYVTSVLYDPEMIKLMDCDIDSVGCPNGVLDLRTGILSFAHPSQLCTRSTGVRYMGLSHNTDRFDAFVMDL-------FNSDESIVRWLQLFLGYALTGHTSEEIFCIWYGAGS-NGKSALKMALQKAFGS--YYTPMSKDCIIKAGGKRAEGAASSHLVALKGARLALCDESEESQVINSACIKEMTGGGAVTCRELFQKCESFVPTHANVLLTNHKPSIADADGGLLRRVSLLP----FRNSYKVAEEVDPNDPHSKPQSTHLKTWLESSEGAEECLVWVVRGSVEWYARQSANPAAKVLAPLPAPMAAAFDEYLREFDDMRMFLKEFCDIGPTFVAPSADLLARFNAEMNSDLKAR 858          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835Z7M0_9STRA (PRA1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M0_9STRA)

HSP 1 Score: 395 bits (1015), Expect = 1.320e-137
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
Query:   70 MAELRRRFQAEAAGARQSPGTADPGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARANAGAGLGSLLSGXXXXXXXXXXXXXXAGLRRGSGQGARR 765
            MAELRRRFQAEAAGARQSPGTADPGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARANAGAGLGSLLSGXXXXXXXXXXXXXXAGLRRGSGQGARR
Sbjct:    1 MAELRRRFQAEAAGARQSPGTADPGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARANAGAGLGSLLSGXXXXXXXXXXXXXXAGLRRGSGQGARR 232          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: D8LEX3_ECTSI (PRA1 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX3_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 2.600e-31
Identity = 85/205 (41.46%), Postives = 114/205 (55.61%), Query Frame = 1
Query:   70 MAELRRRFQAEAAGARQSPGTADPGSGIMGELQSIA----SEL--------QSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARA 648
            M E + R +   +G+R   G+A P   +  + Q++A    SEL        + L  + M+ WGEFF +FK PRAW  +VLDER+TTN LHYRGNY  V  G ++V I+S+P +LL       LL FLFPT    RAV V  R +   ER   A++    +L  TGA   LL+  G     CL H VFRPR++ SK +R   EA+A
Sbjct:    1 MPEPQLRRRPVGSGSR---GSAPPRPNVANQNQAVALAVLSELGAMMELFFKGLRLKEMKGWGEFFARFKAPRAWNTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQA 202          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A7S2SJN4_9STRA (PRA1 family protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJN4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.380e-20
Identity = 60/165 (36.36%), Postives = 87/165 (52.73%), Query Frame = 1
Query:  163 LQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARANAG 657
            LQ +  +LQ+L    +RPWGEFF  FKPP+ WT++ +++R+ TN LHYR NY  V+   +L    SSP LL+     + L V+L   +     +++ GR     ++        + +L   G    LL    LA      H VFR RNLKSKFNR+ +E +   G
Sbjct:   40 LQVLRQQLQALGLNEVRPWGEFFSHFKPPKQWTQDEVEKRVVTNFLHYRTNYLLVLGTILLAMFFSSPMLLITICLVVLLWVYLMLVKKGP--LLIEGRRFDEGQKAIGCGCASILILLMAGQLIKLLGTLSLAVILICLHMVFRQRNLKSKFNRISDEIKLRGG 202          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A482SWI0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWI0_9ARCH)

HSP 1 Score: 81.6 bits (200), Expect = 5.850e-15
Identity = 47/165 (28.48%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  151 IMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEAR 645
            ++  L+ +  ++Q L W+ M+PW EFF  FKPP+  ++  L++RITTN LHYR NY  +  G +++ I+++P ++L + A   +  ++   +   +  ++   +     ++++   L   +L  TG    L +        C  H + RPR++ SK NR+ EE +
Sbjct:   14 LLDALKLVGEKIQVLGWKEMKPWSEFFATFKPPQFDSRH-LEQRITTNFLHYRSNYLAISLGILILQILTNPVIILSSVAIFGICTYVL--QVHRKPFIIGDFSFDGVGKQYLCAGLSAIILFATGTVVKLCWCLFYIILVCGIHMLLRPRSVSSKANRMYEEMK 175          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A7S2U321_9EUKA (PRA1 family protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U321_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 1.710e-13
Identity = 57/169 (33.73%), Postives = 87/169 (51.48%), Query Frame = 1
Query:  139 PGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLL-VAAASLALLVFL-FPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEE 639
            P S +   ++ ++  L  L W + RPW EF   FK P       L+ERI TN L++RGNYC++V  + ++ +  +P  +L V    + +LVFL    ETS       G  ++   +    + + L LL + GA   + Y   L   T LAH VFR R +KS+ N++ EE
Sbjct:   22 PSSALQQFIEELSEVLSRLGWSDARPWEEFGRDFKKPTH-----LEERIWTNFLYFRGNYCYIVAATTILALFFNPTCMLAVMFCVVGMLVFLGVKVETS------PGHPMTFEMKFLAGLPVCLLLLMSAGALFWMSYGILLGMCTSLAHMVFRTRTIKSRINKVYEE 179          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A6V3PRX0_9EUKA (PRA1 family protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3PRX0_9EUKA)

HSP 1 Score: 73.2 bits (178), Expect = 3.820e-12
Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 1
Query:  136 DPGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASL-ALLVFL-FPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEE 639
            D  S +   +  ++   + L W   R W EF  +F  P       L+ER+ TN L+YRGNYC++V  + L+ +  +P+ +L A   +  +++FL    ETS       G ++S   +      + L +LA+ GA   + Y   L   T  AH VFR R LKS++N+L EE
Sbjct:   28 DEQSALQQFITEVSDVFERLGWSEARSWSEFGREFNKPSE-----LEERLWTNFLYYRGNYCYIVVATTLLALFLNPSSMLAAMFCVFGMIIFLGVKVETS------PGESMSYEMKLLAGTPVCLLVLASAGALFWMSYGLLLGMLTSFAHMVFRTRTLKSRWNKLVEE 186          
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A7S4A4L6_9STRA (PRA1 family protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4L6_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.830e-6
Identity = 57/172 (33.14%), Postives = 77/172 (44.77%), Query Frame = 1
Query:  154 MGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYC----FVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGR---AVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARA 648
            + ELQ        L +   RPWGEFFEQFKP    T   LD R+ TN LHY+ NY      VV   +L +  S  AL + A AS A +     T   GR +++ G     ++   R   A V     L   G    +      A    +AH   RPR+L +++N   +E RA
Sbjct:   11 LAELQDTWRRFD-LHYAGARPWGEFFEQFKP----TARDLDTRMATNWLHYKANYAQLTTLVVALGLLWWPTSLFALCVAAIASTASV-----TACPGRRILMIGSYSVKLTTKNRALAAAVAAPLTLIFFGVLTWIALVFSFALVLPVAHMALRPRSLSARYNAASDEVRA 172          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YS19_9STRA0.000e+087.02D5_N domain-containing protein n=5 Tax=Tribonema m... [more]
A0A835Z1H9_9STRA1.080e-24095.63SF3 helicase domain-containing protein (Fragment) ... [more]
A0A835Z1L1_9STRA2.350e-4935.84D5_N domain-containing protein n=1 Tax=Tribonema m... [more]
A0A3D2VPM9_9GAMM7.810e-2125.72SF3 helicase domain-containing protein n=1 Tax=Can... [more]
UPI000AB7246B1.620e-2032.12Uncharacterized protein n=2 Tax=Croceicoccus mobil... [more]
A0A3C1SNC0_9GAMM2.090e-1926.35SF3 helicase domain-containing protein n=1 Tax=Can... [more]
UPI001FB9F2E62.530e-1926.25phage/plasmid primase, P4 family n=1 Tax=Ligilacto... [more]
A0A257JK46_9PROT2.640e-1927.27SF3 helicase domain-containing protein (Fragment) ... [more]
UPI0003455EE63.370e-1927.90phage/plasmid primase, P4 family n=2 Tax=unclassif... [more]
A0A1Y1IMX7_KLENI8.880e-1926.95SF3 helicase domain-containing protein n=1 Tax=Kle... [more]

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BLAST of jgi.p|Trimin1|354631 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835Z7M0_9STRA1.320e-137100.00PRA1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
D8LEX3_ECTSI2.600e-3141.46PRA1 family protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A7S2SJN4_9STRA1.380e-2036.36PRA1 family protein n=1 Tax=Rhizochromulina marina... [more]
A0A482SWI0_9ARCH5.850e-1528.48Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2U321_9EUKA1.710e-1333.73PRA1 family protein n=1 Tax=Lotharella oceanica Ta... [more]
A0A6V3PRX0_9EUKA3.820e-1232.35PRA1 family protein n=1 Tax=Lotharella globosa Tax... [more]
A0A7S4A4L6_9STRA1.830e-633.14PRA1 family protein n=1 Tax=Pelagomonas calceolata... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_301contigContig_301:30123..33160 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354631|estExt_Genemark1.C_Ctg_3010004
BRITEko00000
KEGG koko:K06919
DescriptionD5 N terminal like
COG categoryS
Max annot lvl1224|Proteobacteria
EggNOG OGsCOG3378@1|root,COG3378@2|Bacteria,1MV7I@1224|Proteobacteria,42YMP@68525|delta/epsilon subdivisions,2WUNJ@28221|Deltaproteobacteria,2MGFT@213115|Desulfovibrionales
Evalue3.19e-24
Seed ortholog573370.DMR_15020
Hectar predicted targeting categoryother localisation
TranscriptId354953
TrackFilteredModels1
ProteinId354631
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354631gene_18775Tribonema minus UTEX_B_3156 geneContig_301 30123..33160 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354631Trimin1|354631|estExt_Genemark1.C_Ctg_3010004Tribonema minus UTEX_B_3156 polypeptideContig_301 30123..32981 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18775_3exon_18775_3Tribonema minus UTEX_B_3156 exonContig_301 30123..30476 -
exon_18775_2exon_18775_2Tribonema minus UTEX_B_3156 exonContig_301 30506..31614 -
exon_18775_1exon_18775_1Tribonema minus UTEX_B_3156 exonContig_301 31655..33160 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18775CDS_18775Tribonema minus UTEX_B_3156 CDSContig_301 31655..32981 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_18775UTR5_18775Tribonema minus UTEX_B_3156 five_prime_UTRContig_301 32982..33160 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18775 ID=mRNA_18775|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2969bp|location=Sequence derived from alignment at Contig_301:30123..33160- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TCCTATTTCTCCTATTTTCCTATCATGCATACCCAGATTTAGTGCTTCAG
GAGGCCAGTGATTGCAAGACACGCACTTAAGCCCATTTTACTTTTCCTAT
CCGATAGGAAAGCTTTCCCATCAAACTGATCACGTCATCTCAACCACATT
TTTTTTGTTGCCCTCATTCAAAAGCAGGCATGGACATCGACGACTTTGAC
CTGCGAGCAGCGGAGAATGGCTTTATTGATGATGAGGAGCCCCCTGAAGA
GCCGCCTATGCCGCTTGCCACCCCGCCGGCTGCTGCACCAGCTGCTCCAT
GTGCACCCCCGGCCCGCCCCTCGCCCAAGCGCAACACCAGCTACGCGAGG
CAGAAGATGCAGCAGTACCGCGTGCCTTCCGGCCAGGGCATCAAGGGGTC
GCACAACGGCATGGATGACATGCGCGGAGTGTTCGACGTGCCCAACTATG
AGACTGATGCCGATGTGCGGGAGACCTTCTTCACCGACATCATTGAGGAC
CTGCACCGCTGCGGCTCGCCCTTTGTGCTGATGGAGAACATCTGCAGGCT
ACCGGAAGATGCAGAGACGCGCCTGCGTTTCGACATTGACGTGGAAGTAC
CTTTTAACGCCGACCATCCACTTGCCCTCACCGCCGCCGTCGCCCACAAG
TTCTGCAAGACGCTGTGGGACGTGTTGCACGAGTGCACCGGCATCAGCGG
CGCCTCGCGCTTCTTCGTAGACGCCAAGGGCGCGCCCACGCCGACAGTTG
CAGGCATGTGGAAGCACGGCTTGAAGATTACGTGCAGCGACATCAAGTGC
ACACACAAGGACATGCTGGGCGTTAGGCAGCTCATGAACGACCGCTACAG
CGCGTGGGGGCACGAGGAGTGGCTGGACGGCAAGGAGGCGCACGAGATGC
AGATCATCGACCCGTGCATCTACGAGAACAACGGCACTATGCTGCACGGC
GCGGTCAAGGAGAAACAGCAGCAGCACGGCGGCTACAGCACGGTGGCAGT
GATGGGCGGTGACGACCTTCAGTACTACAGCGGGGGCGACTTGCACGACC
TCTCCTTCGCTGAGCTGCTGCGCGCCAAATCCATCCTGCACCATGACGAG
AGCACCGCGAAACTGCAATGGCGCGCGGGCAAGGAGCCGGTCATTGTGCA
GCGGCGTGGTGCCAAGCGCACGCGCCGCAGTGCCGGCGCGGTAGCGCTGG
CCGCTGCAGCGGAGCACTACACCAACAAACTCACCACTGCAGATGTGCAG
CACATCTACGAGGCGGCAGGGGGGGAGCTGCAGCTGCAGCAGATTGCCGG
CATCAGGGCCGGCACCATCTCATGGCGGGAGGTGAGCCCCGGCACTGATG
CTAGGGTGTGCCTTGTGCCCGAATGTGCCGGCAGTGGCCACAGCGACAAC
GCATTGCTTATCGAGTGCTATCACGGGCTCAAGTACAAGTGCTGCTCCAC
CGGGAAGTGCTTGTACCTGGAGCGCTGGGAGACCGAAGAGGACCTGCTCT
TCGGTGCCACGACGGGCGGCGACGGCGACAAGGCGCGTTTCATCATCTAC
TGCGAAAAGACGGCGCTGTGGAAGCCGCGCTACAACAGTTTCGTGCGCTG
CACCGAGATACCCAAGCTGGTGGCCGCCTACGTCGATCCGCAACTACAGG
ATCTGGAGCCGCACCTGGAGGCGGCGCGTGCCGCTGCTCGCACACGCAGT
AGGGCAGAGGAAGAGGATGAGGAGGCGGACGAGGAGCTAACAGTTTTGGA
GGCCAAAGCGGCCTCCCTCTTTGCCATCAAAGAGAGCATCAAGGGCACGA
GCAAGCGCGAGGCCATCTTGAAGGACGTATTCAGCACCGTACGCGACGAG
GATTTCGAAAAGCTACTCGACGTCAACAAGGACATCTTCAGCTGCCAAAA
CGGCGTGGTGGAGCTGGCCACTGCCACGCTTCGCCCACGCGTGCGGAAGG
ACATGCTGACCCGTGCCGTCAACATTGACTACAATGCTGACTCGCCGCGC
ATCCCCGAAGTTATGCAGCTTCTGACCGACATCACCCTCGCCGCGCCGAA
TCGCCTCAACCGCCCAGCGCTGCTGGAGCGCCTGCTGCGCATACTGGGCT
ACTCCATCACGGGCCACGTGCGCGAGGAGATCATTGTATTCCTTCTCGGC
CGCAGCGCGCGCAGTGGCAAGGGCATCATCGAGAGCCTGCTGCAGCAGGT
TCTCGGCTGCATGTTCTACCAGGCGCCGCAAAGCTTTCTGACGGCATGCA
AGGCGGTGTCGGCGGGTGCCGCGTCATCGCACATGATGGCGCTACGTGGT
GCACGCGTGGTCCACCTCGACGAGCTGCCGGCGGGTGTTGCGTTGGACGC
GCAGATGATTAAGTACATCAGCGGCGGTGCCGACATCTCGGGGCGAGAGC
TGTTTGGCACGCAGACGTCGTTTAGCCCAACCGCAGTTCCGTGGGCCAAC
ACCAACGAGATGCCAATCATCAAGGCGGAGCCGGCGATATTGCAACGCAT
TGAAATCATCCCCTGCGATGCAAAGTTTCGCACGCCCGGGGATGCCAAGT
TCCCCTACGATGCCAATGATAAGACACACTTCATCAAGAACACCAAACTG
CGCGAACACCTGCCCGCGGCCAAGAGGTGGTACGAGGGTGGGCTGGGGGA
GAAACCGGCTTGCTGCAAGCTGGCATGCGACGCTTTCGCCGCTGACAACG
ACACGCTTCAAAGCTGGATTAACGACGAGTGCGAGCTCGGATCCAGGGAG
GGCGCCGATCCGGCACTCATCTTGTGTAGCAGCGCGTTCAGCGGTTACAA
CAATTACCGTGCGCGCCAGGAGCCAGCGCTACCGCCAATCAAGAAACGTG
ACATGCACGAGCAGATGGCGGCCAAGGGTTTTGCCAAGATAGATGACTAC
AGGAAGGCGCACAGCCAGTACAATCTCAAATGCGTGTACGCCGGGCTCAA
GTCTGCGGGCGGATACTAG
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protein sequence of jgi.p|Trimin1|354631

>Trimin1|354631|estExt_Genemark1.C_Ctg_3010004 ID=Trimin1|354631|estExt_Genemark1.C_Ctg_3010004|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=930bp
MDIDDFDLRAAENGFIDDEEPPEEPPMPLATPPAAAPAAPCAPPARPSPK
RNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETF
FTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPFNADHPLAL
TAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKI
TCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYEN
NGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAK
SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNK
LTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPECA
GSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGATTGGDGD
KARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVDPQLQDLEPHLEAAR
AAARTRSRAEEEDEEADEELTVLEAKAASLFAIKESIKGTSKREAILKDV
FSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNID
YNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREE
IIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASS
HMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSP
TAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTH
FIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDE
CELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKG
FAKIDDYRKAHSQYNLKCVYAGLKSAGGY*
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mRNA from alignment at Contig_301:30123..33160-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18775 ID=mRNA_18775|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3038bp|location=Sequence derived from alignment at Contig_301:30123..33160- (Tribonema minus UTEX_B_3156 )
TCCTATTTCTCCTATTTTCCTATCATGCATACCCAGATTTAGTGCTTCAG GAGGCCAGTGATTGCAAGACACGCACTTAAGCCCATTTTACTTTTCCTAT CCGATAGGAAAGCTTTCCCATCAAACTGATCACGTCATCTCAACCACATT TTTTTTGTTGCCCTCATTCAAAAGCAGGCATGGACATCGACGACTTTGAC CTGCGAGCAGCGGAGAATGGCTTTATTGATGATGAGGAGCCCCCTGAAGA GCCGCCTATGCCGCTTGCCACCCCGCCGGCTGCTGCACCAGCTGCTCCAT GTGCACCCCCGGCCCGCCCCTCGCCCAAGCGCAACACCAGCTACGCGAGG CAGAAGATGCAGCAGTACCGCGTGCCTTCCGGCCAGGGCATCAAGGGGTC GCACAACGGCATGGATGACATGCGCGGAGTGTTCGACGTGCCCAACTATG AGACTGATGCCGATGTGCGGGAGACCTTCTTCACCGACATCATTGAGGAC CTGCACCGCTGCGGCTCGCCCTTTGTGCTGATGGAGAACATCTGCAGGCT ACCGGAAGATGCAGAGACGCGCCTGCGTTTCGACATTGACGTGGAAGTAC CTTTTAACGCCGACCATCCACTTGCCCTCACCGCCGCCGTCGCCCACAAG TTCTGCAAGACGCTGTGGGACGTGTTGCACGAGTGCACCGGCATCAGCGG CGCCTCGCGCTTCTTCGTAGACGCCAAGGGCGCGCCCACGCCGACAGTTG CAGGCATGTGGAAGCACGGCTTGAAGATTACGTGCAGCGACATCAAGTGC ACACACAAGGACATGCTGGGCGTTAGGCAGCTCATGAACGACCGCTACAG CGCGTGGGGGCACGAGGAGTGGCTGGACGGCAAGGAGGCGCACGAGATGC AGATCATCGACCCGTGCATCTACGAGAACAACGGCACTATGCTGCACGGC GCGGTCAAGGAGAAACAGCAGCAGCACGGCGGCTACAGCACGGTGGCAGT GATGGGCGGTGACGACCTTCAGTACTACAGCGGGGGCGACTTGCACGACC TCTCCTTCGCTGAGCTGCTGCGCGCCAAATCCATCCTGCACCATGACGAG AGCACCGCGAAACTGCAATGGCGCGCGGGCAAGGAGCCGGTCATTGTGCA GCGGCGTGGTGCCAAGCGCACGCGCCGCAGTGCCGGCGCGGTAGCGCTGG CCGCTGCAGCGGAGCACTACACCAACAAACTCACCACTGCAGATGTGCAG CACATCTACGAGGCGGCAGGGGGGGAGCTGCAGCTGCAGCAGATTGCCGG CATCAGGGCCGGCACCATCTCATGGCGGGAGGTGAGCCCCGGCACTGATG CTAGGGTGTGCCTTGTGCCCGAATGTGCCGGCAGTGGCCACAGCGACAAC GCATTGCTTATCGAGTGCTATCACGGGCTCAAGTACAAGTGCTGCTCCAC CGGGAAGTGCTTGTACCTGGAGCGCTGGGAGACCGAAGAGGACCTGCTCT TCGGTGGTGACAACGGGCTCGCCAGGCTGTTTGCCAAGCTGCGCAGCCAC GACGGGCGGCGACGGCGACAAGGCGCGTTTCATCATCTACTGCGAAAAGA CGGCGCTGTGGAAGCCGCGCTACAACAGTTTCGTGCGCTGCACCGAGATA CCCAAGCTGGTGGCCGCCTACGTCGATCCGCAACTACAGGATCTGGAGCC GCACCTGGAGGCGGCGCGTGCCGCTGCTCGCACACGCAGTAGGGCAGAGG AAGAGGATGAGGAGGCGGACGAGGAGCTAACAGTTTTGGAGGCCAAAGCG GCCTCCCTCTTTGCCATCAAAGAGAGCATCAAGGGCACGAGCAAGCGCGA GGCCATCTTGAAGGACGTATTCAGCACCGTACGCGACGAGGATTTCGAAA AGCTACTCGACGTCAACAAGGACATCTTCAGCTGCCAAAACGGCGTGGTG GAGCTGGCCACTGCCACGCTTCGCCCACGCGTGCGGAAGGACATGCTGAC CCGTGCCGTCAACATTGACTACAATGCTGACTCGCCGCGCATCCCCGAAG TTATGCAGCTTCTGACCGACATCACCCTCGCCGCGCCGAATCGCCTCAAC CGCCCAGCGCTGCTGGAGCGCCTGCTGCGCATACTGGGCTACTCCATCAC GGGCCACGTGCGCGAGGAGATCATTGTATTCCTTCTCGGCCGCAGCGCGC GCAGTGGCAAGGGCATCATCGAGAGCCTGCTGCAGCAGGTTCTCGGCTGC ATGTTCTACCAGGCGCCGCAAAGCTTTCTGACGGCATGCAAGGCGGTGTC GGCGGGTGCCGCGTCATCGCACATGATGGCGCTACGTGGTGCACGCGTGG TCCACCTCGACGAGCTGCCGGCGGGTGTTGCGTTGGACGCGCAGATGATT AAGTACATCAGCGGCGGTGCCGACATCTCGGGGCGAGAGCTGTTTGGCAC GCAGACGTCGTTTAGCCCAACCGCAGTTCCGTGGGCCAACACCAACGAGA TGCCAATCATCAAGGCGGAGCCGGCGATATTGCAACGCATTGAAATCATC CCCTGCGATGCAAAGTTTCGCACGCCCGGGGATGCCAAGTTCCCCTACGA TGCCAATGATAAGACACACTTCATCAAGAACACCAAACTGCGCGAACACC TGCCCGTAGAGGCGTTCCTGGCGGTGGTGTGCAGGCGGCCAAGAGGTGGT ACGAGGGTGGGCTGGGGGAGAAACCGGCTTGCTGCAAGCTGGCATGCGAC GCTTTCGCCGCTGACAACGACACGCTTCAAAGCTGGATTAACGACGAGTG CGAGCTCGGATCCAGGGAGGGCGCCGATCCGGCACTCATCTTGTGTAGCA GCGCGTTCAGCGGTTACAACAATTACCGTGCGCGCCAGGAGCCAGCGCTA CCGCCAATCAAGAAACGTGACATGCACGAGCAGATGGCGGCCAAGGGTTT TGCCAAGATAGATGACTACAGGAAGGCGCACAGCCAGTACAATCTCAAAT GCGTGTACGCCGGGCTCAAGTCTGCGGGCGGATACTAG
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Coding sequence (CDS) from alignment at Contig_301:30123..33160-

>mRNA_18775 ID=mRNA_18775|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2790bp|location=Sequence derived from alignment at Contig_301:30123..33160- (Tribonema minus UTEX_B_3156 )
ATGGACATCGACGACTTTGACCTGCGAGCAGCGGAGAATGGCTTTATTGA
TGATGAGGAGCCCCCTGAAGAGCCGCCTATGCCGCTTGCCACCCCGCCGG
CTGCTGCACCAGCTGCTCCATGTGCACCCCCGGCCCGCCCCTCGCCCAAG
CGCAACACCAGCTACGCGAGGCAGAAGATGCAGCAGTACCGCGTGCCTTC
CGGCCAGGGCATCAAGGGGTCGCACAACGGCATGGATGACATGCGCGGAG
TGTTCGACGTGCCCAACTATGAGACTGATGCCGATGTGCGGGAGACCTTC
TTCACCGACATCATTGAGGACCTGCACCGCTGCGGCTCGCCCTTTGTGCT
GATGGAGAACATCTGCAGGCTACCGGAAGATGCAGAGACGCGCCTGCGTT
TCGACATTGACGTGGAAGTACCTTTTAACGCCGACCATCCACTTGCCCTC
ACCGCCGCCGTCGCCCACAAGTTCTGCAAGACGCTGTGGGACGTGTTGCA
CGAGTGCACCGGCATCAGCGGCGCCTCGCGCTTCTTCGTAGACGCCAAGG
GCGCGCCCACGCCGACAGTTGCAGGCATGTGGAAGCACGGCTTGAAGATT
ACGTGCAGCGACATCAAGTGCACACACAAGGACATGCTGGGCGTTAGGCA
GCTCATGAACGACCGCTACAGCGCGTGGGGGCACGAGGAGTGGCTGGACG
GCAAGGAGGCGCACGAGATGCAGATCATCGACCCGTGCATCTACGAGAAC
AACGGCACTATGCTGCACGGCGCGGTCAAGGAGAAACAGCAGCAGCACGG
CGGCTACAGCACGGTGGCAGTGATGGGCGGTGACGACCTTCAGTACTACA
GCGGGGGCGACTTGCACGACCTCTCCTTCGCTGAGCTGCTGCGCGCCAAA
TCCATCCTGCACCATGACGAGAGCACCGCGAAACTGCAATGGCGCGCGGG
CAAGGAGCCGGTCATTGTGCAGCGGCGTGGTGCCAAGCGCACGCGCCGCA
GTGCCGGCGCGGTAGCGCTGGCCGCTGCAGCGGAGCACTACACCAACAAA
CTCACCACTGCAGATGTGCAGCACATCTACGAGGCGGCAGGGGGGGAGCT
GCAGCTGCAGCAGATTGCCGGCATCAGGGCCGGCACCATCTCATGGCGGG
AGGTGAGCCCCGGCACTGATGCTAGGGTGTGCCTTGTGCCCGAATGTGCC
GGCAGTGGCCACAGCGACAACGCATTGCTTATCGAGTGCTATCACGGGCT
CAAGTACAAGTGCTGCTCCACCGGGAAGTGCTTGTACCTGGAGCGCTGGG
AGACCGAAGAGGACCTGCTCTTCGGTGCCACGACGGGCGGCGACGGCGAC
AAGGCGCGTTTCATCATCTACTGCGAAAAGACGGCGCTGTGGAAGCCGCG
CTACAACAGTTTCGTGCGCTGCACCGAGATACCCAAGCTGGTGGCCGCCT
ACGTCGATCCGCAACTACAGGATCTGGAGCCGCACCTGGAGGCGGCGCGT
GCCGCTGCTCGCACACGCAGTAGGGCAGAGGAAGAGGATGAGGAGGCGGA
CGAGGAGCTAACAGTTTTGGAGGCCAAAGCGGCCTCCCTCTTTGCCATCA
AAGAGAGCATCAAGGGCACGAGCAAGCGCGAGGCCATCTTGAAGGACGTA
TTCAGCACCGTACGCGACGAGGATTTCGAAAAGCTACTCGACGTCAACAA
GGACATCTTCAGCTGCCAAAACGGCGTGGTGGAGCTGGCCACTGCCACGC
TTCGCCCACGCGTGCGGAAGGACATGCTGACCCGTGCCGTCAACATTGAC
TACAATGCTGACTCGCCGCGCATCCCCGAAGTTATGCAGCTTCTGACCGA
CATCACCCTCGCCGCGCCGAATCGCCTCAACCGCCCAGCGCTGCTGGAGC
GCCTGCTGCGCATACTGGGCTACTCCATCACGGGCCACGTGCGCGAGGAG
ATCATTGTATTCCTTCTCGGCCGCAGCGCGCGCAGTGGCAAGGGCATCAT
CGAGAGCCTGCTGCAGCAGGTTCTCGGCTGCATGTTCTACCAGGCGCCGC
AAAGCTTTCTGACGGCATGCAAGGCGGTGTCGGCGGGTGCCGCGTCATCG
CACATGATGGCGCTACGTGGTGCACGCGTGGTCCACCTCGACGAGCTGCC
GGCGGGTGTTGCGTTGGACGCGCAGATGATTAAGTACATCAGCGGCGGTG
CCGACATCTCGGGGCGAGAGCTGTTTGGCACGCAGACGTCGTTTAGCCCA
ACCGCAGTTCCGTGGGCCAACACCAACGAGATGCCAATCATCAAGGCGGA
GCCGGCGATATTGCAACGCATTGAAATCATCCCCTGCGATGCAAAGTTTC
GCACGCCCGGGGATGCCAAGTTCCCCTACGATGCCAATGATAAGACACAC
TTCATCAAGAACACCAAACTGCGCGAACACCTGCCCGCGGCCAAGAGGTG
GTACGAGGGTGGGCTGGGGGAGAAACCGGCTTGCTGCAAGCTGGCATGCG
ACGCTTTCGCCGCTGACAACGACACGCTTCAAAGCTGGATTAACGACGAG
TGCGAGCTCGGATCCAGGGAGGGCGCCGATCCGGCACTCATCTTGTGTAG
CAGCGCGTTCAGCGGTTACAACAATTACCGTGCGCGCCAGGAGCCAGCGC
TACCGCCAATCAAGAAACGTGACATGCACGAGCAGATGGCGGCCAAGGGT
TTTGCCAAGATAGATGACTACAGGAAGGCGCACAGCCAGTACAATCTCAA
ATGCGTGTACGCCGGGCTCAAGTCTGCGGGCGGATACTAG
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