Trimin1|352028|estExt_Genemark1.C_Ctg_1060068 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352028
Unique NameTrimin1|352028|estExt_Genemark1.C_Ctg_1060068
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length249
Homology
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: A0A836CQT4_9STRA (ZT_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQT4_9STRA)

HSP 1 Score: 470 bits (1210), Expect = 3.160e-167
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAVMLGGVEGVRGFDSIRSRRMGPQTLVDLTIQIAQRARFAILKKLPMVSDVIVTTAVDEKPCPVSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDLVETYMAVEARAGTGGSSDSFYGSSKLRANLLSNLLDRASSGRKGGAGGAGDWEQSSWADDKHT 248
            MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAVMLGGVEGVRGFDSIRSRRMGPQTLVDLTIQIAQRARFAILKKLPMVSDVIVTTAVDEKPCPVSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDLVETYMAVEARAGTGGSSDSFYGSSKLRANLLSNLLDRASSGRKGGAGGAGDWEQSSWADDKHT
Sbjct:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAVMLGGVEGVRGFDSIRSRRMGPQTLVDLTIQIAQRARFAILKKLPMVSDVIVTTAVDEKPCPVSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDLVETYMAVEARAGTGGSSDSFYGSSKLRANLLSNLLDRASSGRKGGAGGAGDWEQSSWADDKHT 248          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: D7G7A9_ECTSI (Cation efflux protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A9_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.260e-51
Identity = 109/232 (46.98%), Postives = 143/232 (61.64%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAVM----LGGVE-----------------------------GVRGFDSIRSRRMGPQTLVDLTIQ------------IAQRARFAILKKLPMVSDVIVTTAVDEKPCPVSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDLVE 187
            ++NA HHRTDAVSSVVAL+A+ G+M GAP+LDP+AGL V     L GV+                             GV  FD +R+RRMGPQTLVDLTIQ            I QR R+ IL +LP V+DV+V  AV+ KPCP  + LRP  +IE D+R VV  +L E+  VPK+ VHY  + T+A+VF+RVDP L++ +A  IA + +R L + + DLCS +VHLDL+E
Sbjct:  362 IANAWHHRTDAVSSVVALLAIAGSMSGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRKVAEIATQVPGVLSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVEPKPCPAMSSLRPQEDIEQDIRDVVLSKLPEIESVPKIMVHYINMVTTAEVFIRVDPNLKIRDAADIARRTKRALSSSVHDLCSSEVHLDLLE 593          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: A0A7S2V756_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V756_9STRA)

HSP 1 Score: 134 bits (336), Expect = 5.150e-33
Identity = 92/231 (39.83%), Postives = 121/231 (52.38%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAV---------------------------------MLGGVEGVRGFDSIRSRRMGPQTLVDLTI------------QIAQRARFAILKKLPMVSDVIVTTAVD-EKPCPVSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDL 185
            ++NA HHR+DA+SS VA+  +VGA  G P+LDPLAGL V                                 +L  VEGV+G   +R+R MG  TLVD+ I            Q+A+RAR+ +L+ +PMVSDV+VT     +K CPV+  LRPH EIE DVRR V         V ++  HY  +    DVFV VDP +RV EA  I  +V    +  I D+   D+HLDL
Sbjct:  197 IANAWHHRSDALSSFVAVGGIVGATMGLPVLDPLAGLMVSAMLTLTGLQCGWDSVKALTDTADTAMVSKLGALLDQVEGVQGHSQLRARSMGSDTLVDVKIHTHPRISASAAHQVAERARWHLLRNVPMVSDVLVTLDTSGDKICPVTATLRPHSEIEKDVRRTVAPI--PGVQVTRMMAHYNDMMAEVDVFVTVDPNIRVSEASRIGKKVCAA-IEGITDIRKADIHLDL 424          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: A0A2E4LPB2_9DELT (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A2E4LPB2_9DELT)

HSP 1 Score: 106 bits (265), Expect = 3.140e-23
Identity = 77/243 (31.69%), Postives = 122/243 (50.21%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAV----------------------------------MLGGVEGVRGFDSIRSRRMGPQTLVDLTI------------QIAQRARFAILKKLPMVSDVIVTTAVD----EKPCPVSN-----VLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDLVET 188
            ++NA HHR+DA+SSV ALV + GA  G PL+DP+AG+ V                                  +L  ++GV  F  +R+RRMGPQ LVDL I            Q+A+R R  IL +LP V++V+V    +    E    +       ++RP  EIE DV++++  E+ E+  +  +  HY     +  V + +D  +++ +A  IAS+ R + +  IKD+   D+HL+L +T
Sbjct:  148 LANAWHHRSDAISSVAALVGIGGAQWGIPLMDPIAGVLVAGLIIKTGXDIGYESIRELTDEXVEEEVISELGHILAEIDGVDHFHEMRARRMGPQLLVDLHIEVXSMMSISAAHQVAERVRLRILDELPAVNEVLVHVDAEDDFVESKXGIEETKDIVLMRPQTEIEXDVKKILT-EIPEIQGITHIYCHYLNQELTVXVNILLDXEMQIXDAQKIASKAR-MKIEEIKDIXXADLHLELDDT 388          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: A0A7S4B4U6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B4U6_CHRCT)

HSP 1 Score: 107 bits (267), Expect = 4.760e-23
Identity = 83/236 (35.17%), Postives = 116/236 (49.15%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAV---------------------------------MLGGVEGVRGFDSIRSRRMGPQTLVDLTIQI------------AQRARFAILKKLPMVSDVIV--TTAVDEKPCPVSNVL----RPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDL 185
            M+NA HHR+DA+SSVVA++ + GAM G P+LDP+AGL V                                 +  G+ GV+    IRSR MG  +LVDL IQ+            A+  R  +L  +P VS+V+V   TA  +  CP+   +    R H E+E  VR+ + Q LRE+T V  V VHY     + DV   +   LRV E   +A+  RR L+    D+ +V V +DL
Sbjct:  274 MANAWHHRSDALSSVVAVLGIAGAMLGLPVLDPIAGLLVAGMVSSMGLRIGIEAVMELTDTHDFEATQSVHRVATGIPGVQRAWQIRSRSMGGASLVDLAIQVEPKLTASSAHKVAEEVRMEVLNSVPRVSEVLVHVDTAPHDASCPLQTQVMQSARSHLEVEEQVRQELSQ-LRELTGVTSVLVHYLPAGLTVDVQATMADHLRVDELRGVAAVARRKLMQSAPDITAVRVSVDL 508          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: A0A2E5C1W2_9DELT (Cation-efflux pump n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5C1W2_9DELT)

HSP 1 Score: 104 bits (260), Expect = 1.660e-22
Identity = 72/239 (30.13%), Postives = 117/239 (48.95%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAV----------------------------------MLGGVEGVRGFDSIRSRRMGPQTLVDLTI------------QIAQRARFAILKKLPMVSDVIVTTAVDEK--------PCPVSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDL 185
            ++NA HHR+DA+SSV ALV + GA  G P++DP+AG+ V                                  +L  V+GV  +  +R+RRMGP  LVD+ I            Q+A+R R  IL+ +P V++V+V    ++         P     ++RP  EIE D++ ++ Q + E+  +  +  HY     S  V + +D  +R+ +A  IAS  + + +  IKD+   D+HL+L
Sbjct:  148 LANAWHHRSDAISSVAALVGIAGAHWGIPMMDPIAGVLVAGLIVKAGIDIGYESLRELTDEIPEEEVISELNKILADVDGVDNYHEMRARRMGPNLLVDMHIEVDSMMSISAAHQVAERVRLRILENIPAVNEVLVHVDAEDDFEDEEGGDPSKDIILMRPQSEIEDDLKNILNQ-IPEIIGITHIYCHYLNQQLSVQVNIMLDSEMRIVDAQKIASTAK-LKIEEIKDINDADIHLEL 384          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: K3WA39_GLOUD (ZT_dimer domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA39_GLOUD)

HSP 1 Score: 90.5 bits (223), Expect = 1.080e-17
Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAV--MLGGVEGVRGFDSIRS---RRMGPQTLVDLTIQIAQRARFAILKKLPMVSDVIVTTAVDEKPCPVSNV---------LRPHGEIEGDVRRVVRQELREVTDVPKVTVHYT----GLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDLVE 187
            ++NA HHRTDA+SSVVALV ++G M G PLLDP AG+AV  M+    G    DS+R    + +  + L  L   I+ R R  IL+++  VS+V+V   V+      S V         +RP+ EI+ DV  V+  E+ ++  +  +  H+     G  T  DV + V P L+V +A ++A + R+  +  I  +   D+HL+L++
Sbjct:  108 IANAWHHRTDAISSVVALVGILGTMGGIPLLDPAAGIAVAAMIIKTGGEICLDSVRELTDKSVEEEVLELLNEVISARVRSHILREVRDVSEVLVHIDVEFGAADRSKVSSKLLFEKEMRPYKEIKKDVDGVLA-EIPDIVGITHLNTHWVPYINGCGTVVDVAIVVHPDLKVGDAHSVAKRARKA-IEEISYISEADIHLELLD 310          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: A0A7S4VRT5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VRT5_9DINO)

HSP 1 Score: 87.4 bits (215), Expect = 4.000e-16
Identity = 78/235 (33.19%), Postives = 110/235 (46.81%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAVML----GGVE-------------------------------GVRGFDSIRSRRMGPQTLVDLTI------------QIAQRARFAILKKLPMVSDVIVTTAVDEKPCPVSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYT---GLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDL 185
            ++NA HHR+DA+SSV ALV V G+M G PLLDP AGL V       GVE                               GV   D +R+R+MGP +LVDL I            Q+ +  R  I +  P VS+V+VT    ++      ++RPH E+E +VR ++   +  +  V  V  HY    G+    D+    D  + V +A  IA + R VL   +  + SVDV L+L
Sbjct:  231 VANAWHHRSDALSSVAALVGVGGSMVGMPLLDPAAGLLVSALVAKAGVEIGWEAVAEVTEKAEPGEEVREAVRAIARATAGVVSIDRLRTRKMGPFSLVDLCIEVDPEISVSAAYQVGEHLRHEIHRSQPNVSEVLVTVVPFQRGTVA--LMRPHTEVEREVRALLAS-VPGIRGVSHVIAHYVPGDGIRLKVDIVC--DSSITVRDACGIAGEARSVLEG-LHGISSVDVDLEL 459          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: A0A6B2L502_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L502_9EUKA)

HSP 1 Score: 80.1 bits (196), Expect = 1.150e-13
Identity = 69/236 (29.24%), Postives = 109/236 (46.19%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAV-----------------------------------MLGGVEGVRGFDSIRSRRMGPQTLVDLTI------------QIAQRARFAILKKLPMVSDVIVTT---AVDEKPCPVSN--VLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLD 184
            ++NA HHR+DAVSSVVA + V G++ G PLLDP+AG+ V                                   +L  +  V G  ++RSR+MGP +LVD  I            QIA++AR  IL+K P V + ++     AV   P    +  +L  H  +  D+++ ++     + D    ++HY G    A   + +D    V EA  I  + ++V++ +I  L  V + LD
Sbjct:  166 VANAWHHRSDAVSSVVAFIGVGGSILGWPLLDPVAGVIVAGFIIHSGYQILLNSIKELTDNQAIEHDTIEGISNLLKSMPEVWGHHNLRSRKMGPYSLVDFHITVDPVLTVTAGHQIAEKARKTILEKFPQVREALIHVEGGAVSSDPGYHEDHKILPSHSTVVLDIKKELKA-FPHIRDSDFYSIHYLGEEVHASFAIILDSATSVKEAKEIGIEAKKVVLQQIPYLTDVVIKLD 400          
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Match: A0A0P9C459_9GAMM (Cation diffusion facilitator family transporter n=1 Tax=Thiohalorhabdus denitrificans TaxID=381306 RepID=A0A0P9C459_9GAMM)

HSP 1 Score: 71.6 bits (174), Expect = 9.300e-11
Identity = 67/214 (31.31%), Postives = 99/214 (46.26%), Query Frame = 0
Query:    1 MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAVM-----LGG-----------------------------VEGVRGFDSIRSRRMGPQTLVDLTIQ------------IAQRARFAILKKLPMVSDVIVTTAV--DEKPCPVSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVDPRLRVHEAIAIASQVR 166
            ++NA HHRTDA+SSV ALV + G+M G  +LD +A +AV       GG                             +EGV+    +++RRMGP+ LVD+ +Q            IA+R R  +++  P VS+V+V      DE   P+   L    EI  +V R   + L     +   TVHY G   + ++ V VD    + EA  IA ++R
Sbjct:  160 VANAWHHRTDALSSVAALVGIAGSMMGLVVLDTVAAVAVASMVIWAGGKLGWDAIKELVDTSLEREEVERLHRQMLRIEGVKAVHGLKTRRMGPEALVDVHVQVPGTVSVSEGHQIAERVRKHLIRSHPDVSEVLVHVDPENDEHGIPL---LPNREEIMAEVFRCT-EALEHDLAIRDYTVHYLGGRITLELAVEVDASHTLGEAYRIAERLR 369          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352028 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQT4_9STRA3.160e-167100.00ZT_dimer domain-containing protein n=1 Tax=Tribone... [more]
D7G7A9_ECTSI1.260e-5146.98Cation efflux protein n=2 Tax=Ectocarpus siliculos... [more]
A0A7S2V756_9STRA5.150e-3339.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2E4LPB2_9DELT3.140e-2331.69Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A7S4B4U6_CHRCT4.760e-2335.17Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A2E5C1W2_9DELT1.660e-2230.13Cation-efflux pump n=1 Tax=Deltaproteobacteria bac... [more]
K3WA39_GLOUD1.080e-1734.63ZT_dimer domain-containing protein n=1 Tax=Globisp... [more]
A0A7S4VRT5_9DINO4.000e-1633.19Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A6B2L502_9EUKA1.150e-1329.24Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A0P9C459_9GAMM9.300e-1131.31Cation diffusion facilitator family transporter n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036837Cation efflux protein, cytoplasmic domain superfamilyGENE3D3.30.70.1350Cation efflux protein, cytoplasmic domaincoord: 42..93
e-value: 5.7E-5
score: 25.0
IPR036837Cation efflux protein, cytoplasmic domain superfamilyGENE3D3.30.70.1350Cation efflux protein, cytoplasmic domaincoord: 108..195
e-value: 6.4E-11
score: 44.0
IPR036837Cation efflux protein, cytoplasmic domain superfamilySUPERFAMILY160240Cation efflux protein cytoplasmic domain-likecoord: 42..91
IPR036837Cation efflux protein, cytoplasmic domain superfamilySUPERFAMILY160240Cation efflux protein cytoplasmic domain-likecoord: 107..185
IPR027469Cation efflux transmembrane domain superfamilyGENE3D1.20.1510.10Cation efflux protein transmembrane domaincoord: 1..41
e-value: 1.9E-7
score: 32.9
IPR027469Cation efflux transmembrane domain superfamilySUPERFAMILY161111Cation efflux protein transmembrane domain-likecoord: 2..40
IPR027470Cation efflux protein, cytoplasmic domainPFAMPF16916ZT_dimercoord: 110..184
e-value: 8.7E-7
score: 29.0
NoneNo IPR availablePANTHERPTHR43840MITOCHONDRIAL METAL TRANSPORTER 1-RELATEDcoord: 1..39
NoneNo IPR availablePANTHERPTHR43840MITOCHONDRIAL METAL TRANSPORTER 1-RELATEDcoord: 110..184
NoneNo IPR availablePANTHERPTHR43840:SF15MITOCHONDRIAL METAL TRANSPORTER 1-RELATEDcoord: 1..39
coord: 110..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_106contigContig_106:410206..413765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352028mRNA_9525Tribonema minus UTEX_B_3156 mRNAContig_106 409955..413862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352028|estExt_Genemark1.C_Ctg_1060068 ID=Trimin1|352028|estExt_Genemark1.C_Ctg_1060068|Name=jgi.p|Trimin1|352028|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=249bp
MSNALHHRTDAVSSVVALVAVVGAMCGAPLLDPLAGLAVMLGGVEGVRGF
DSIRSRRMGPQTLVDLTIQIAQRARFAILKKLPMVSDVIVTTAVDEKPCP
VSNVLRPHGEIEGDVRRVVRQELREVTDVPKVTVHYTGLSTSADVFVRVD
PRLRVHEAIAIASQVRRVLVNRIKDLCSVDVHLDLVETYMAVEARAGTGG
SSDSFYGSSKLRANLLSNLLDRASSGRKGGAGGAGDWEQSSWADDKHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036837Cation_efflux_CTD_sf
IPR027469Cation_efflux_TMD_sf
IPR027470Cation_efflux_CTD