Trimin1|348638|estExt_Genemark1.C_Ctg_280087 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348638
Unique Name	Trimin1\|348638\|estExt_Genemark1.C_Ctg_280087
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	339

Homology

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BLAST of jgi.p|Trimin1|348638 vs. uniprot
Match: A0A836CEJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ9_9STRA)

HSP 1 Score: 397 bits (1020), Expect = 2.170e-135
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0

Query:    1 MASSGVFPTHAGRRPYVGEQQGGGYDVSGGAGAGGFXXXYDYAQQQAMQQRLLQHLQMQQAEHMAAGQKRGLQHLYESAQESLSELDSHNYQPALGAGGLMGGGGTDAERIRIPPLRAKKESYWAGDAARGNGREGASGXXXXXXXSVSYASEPTPGHMFATSPFAAQHPQQXXXXXXXXXXXXXXXXXXXXXXXXXXQWASSGSMGSGGGGQQGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXSXXXXXXXXXXXXXXXXXXXXXXDGERSSAPLDTALPPMPNGSSSAGSSGGGTGSTVFALGSPLRTEAV 338
            MASSGVFPTHAGRRPYVGEQQGGGYDVSGGAGAGGFXXXYDYAQQQAMQQRLLQHLQMQQAEHMAAGQKRGLQHLYESAQESLSELDSHNYQPALGAGGLMGGGGTDAERIRIPPLRAKKESYWAGDAARGNGREGASGXXXXXXXSVSYASEPTPGHMFATSPFAAQHPQQXXXXXXXXXXXXXXXXXXXXXXXXXXQWASSGSMGSGGGGQQGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXSXXXXXXXXXXXXXXXXXXXXXXDGERSSAPLDTALPPMPNGSSSAGSSGGGTGSTVFALGSPLRTEAV
Sbjct:    1 MASSGVFPTHAGRRPYVGEQQGGGYDVSGGAGAGGFXXXYDYAQQQAMQQRLLQHLQMQQAEHMAAGQKRGLQHLYESAQESLSELDSHNYQPALGAGGLMGGGGTDAERIRIPPLRAKKESYWAGDAARGNGREGASGXXXXXXXSVSYASEPTPGHMFATSPFAAQHPQQXXXXXXXXXXXXXXXXXXXXXXXXXXQWASSGSMGSGGGGQQGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXSXXXXXXXXXXXXXXXXXXXXXXDGERSSAPLDTALPPMPNGSSSAGSSGGGTGSTVFALGSPLRTEAV 338

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348638 vs. uniprot

BLAST of jgi.p|Trimin1|348638 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CEJ9_9STRA	2.170e-135	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 207..222 score: 42.97 coord: 141..152 score: 43.75 coord: 264..282 score: 38.16 coord: 237..247 score: 38.64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..338

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_28	contig	Contig_28:939891..944713 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348638	mRNA_9036	Tribonema minus UTEX_B_3156	mRNA	Contig_28 939891..944713 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348638|estExt_Genemark1.C_Ctg_280087 ID=Trimin1|348638|estExt_Genemark1.C_Ctg_280087|Name=jgi.p|Trimin1|348638|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=339bp
MASSGVFPTHAGRRPYVGEQQGGGYDVSGGAGAGGFAGAYDYAQQQAMQQ
RLLQHLQMQQAEHMAAGQKRGLQHLYESAQESLSELDSHNYQPALGAGGL
MGGGGTDAERIRIPPLRAKKESYWAGDAARGNGREGASGAGGGGGGSVSY
ASEPTPGHMFATSPFAAQHPQQQQQQQQQPYYLHQHMAQLRQQQLQLQQW
ASSGSMGSGGGGQQGDSGSGGGSYGAGTGGGGSGGSSGNSSNGGGGSSGN
GSNGGGGSSGNGSNGGSGSSGGGGSSGEPAAHGTGSSYAGGTDGERSSAP
LDTALPPMPNGSSSAGSSGGGTGSTVFALGSPLRTEAV*