Trimin1|52072|CE52071_63 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|52072
Unique NameTrimin1|52072|CE52071_63
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length192
Homology
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A835Z7P2_9STRA (Ubiquitin-protein ligase 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P2_9STRA)

HSP 1 Score: 385 bits (990), Expect = 1.390e-135
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query:    1 GDGGLSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENLT 191
            GDGGLSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENLT
Sbjct:    1 GDGGLSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENLT 191          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 5.870e-75
Identity = 127/186 (68.28%), Postives = 150/186 (80.65%), Query Frame = 0
Query:    5 LSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENL 190
            LSP  RR AV AVE+  LT  +RCLE LY G+A V+P ELL +FTA EAE LFCGVPEVDV+LL+R TEYEGV+PTDPH+ +FW ALR M   DR + V FCSGR+RLP SAA+F MNF LTAPH   ++ PD+YLP+AQTCFFSLALP+YSS+E C  KL YAI+NA+LMDADY++RSADGWENL
Sbjct: 8373 LSPRQRRLAVRAVEQLRLTSGSRCLESLYQGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDPHVGYFWQALRRMGREDRSSFVNFCSGRSRLPGSAAEFAMNFKLTAPH-RDYDDPDEYLPIAQTCFFSLALPKYSSVEVCLEKLRYAIKNADLMDADYLVRSADGWENL 8557          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 2.760e-74
Identity = 125/181 (69.06%), Postives = 148/181 (81.77%), Query Frame = 0
Query:   10 RRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENL 190
            RRRAV AVE+  LT  +RCLE LY G+A V+P ELL +FTA EAE LFCGVPEVDV+LL+R TEYEGV+PTDPH+ +FW ALR M   DR + V FCSGR+RLP SAA+F MNF LTAPH   ++ PD+YLP+AQTCFFSLALP+YSS+E C  KL YAI+NA+LMDADY++RSADGWENL
Sbjct: 7678 RRRAVRAVEQLRLTSGSRCLESLYQGLAGVLPVELLGVFTAAEAEALFCGVPEVDVDLLQRATEYEGVRPTDPHVGYFWQALRRMGREDRSSFVNFCSGRSRLPGSAAEFAMNFKLTAPH-RDYDDPDEYLPIAQTCFFSLALPKYSSVEVCLEKLRYAIKNADLMDADYLVRSADGWENL 7857          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A7S2CPC5_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPC5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 8.200e-50
Identity = 92/174 (52.87%), Postives = 113/174 (64.94%), Query Frame = 0
Query:   14 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 187
            V AV    L   A  L  L  G+A+V+P EL  +FTAEE E L CGV EVDVELL+  TEYE V  ++PHI  FW  L  M   +R  L+ F   R+R+P SA DFPMNF L  P   + + PD +LP AQTCFFSL+LP+Y+S ET RAKLL+AI N+  MDAD  + SA+GW
Sbjct:   47 VEAVAACRLRESAPLLRSLRNGLASVLPVELFPVFTAEELEVLVCGVREVDVELLKSCTEYEEVDESEPHIGFFWDVLEEMRPEERTQLLKFVWARSRMPNSAKDFPMNFKLQGPPTGSQDDPDSWLPHAQTCFFSLSLPKYTSKETLRAKLLFAINNSPNMDADVRLHSAEGW 220          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: I2CP01_NANGC (E3 ubiquitin-protein ligase HERC2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP01_NANGC)

HSP 1 Score: 173 bits (438), Expect = 2.010e-47
Identity = 94/175 (53.71%), Postives = 112/175 (64.00%), Query Frame = 0
Query:   14 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYE-GVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 187
            V  VE   L   A  +     G+AAVVP ELL LFT EE E+L CGV EVDVELL + T+YE GV P  PH++ FW  L  M A +R   + F   R+R+P SA DFPMNF L  P     E+PDDYLP AQTCFFSL+LP+YSS E  R KLL AI N+  MDAD  + +A+GW
Sbjct:  450 VRLVETVRLKESAAMMGAFQEGMAAVVPQELLPLFTEEEVEQLICGVREVDVELLRKCTDYEDGVDPDAPHVKAFWEVLEEMQAEERTDFLRFAWARSRMPASAKDFPMNFRLQGPQGGAKEKPDDYLPHAQTCFFSLSLPQYSSKEILREKLLLAISNSPNMDADVRLHTAEGW 624          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: W7THG0_9STRA (Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THG0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.290e-46
Identity = 94/175 (53.71%), Postives = 113/175 (64.57%), Query Frame = 0
Query:   14 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYE-GVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 187
            V  VE   L   A  +     G+AAVVP ELL LFT EE E+L CGV EVDVELL++ T+YE GV P  PH++ FW  L  M A +R   + F   R+R+P SA DFPMNF L  P     E+PDDYLP AQTCFFSL+LP+YSS E  R KLL AI N+  MDAD  + +A+GW
Sbjct: 1592 VRLVETVRLKESAAMMGAFQEGMAAVVPQELLPLFTEEEVEQLICGVREVDVELLKKCTDYEDGVDPDAPHVKAFWEVLEEMQAEERTDFLRFAWARSRMPASAKDFPMNFRLQGPQGGAKEKPDDYLPHAQTCFFSLSLPQYSSKEILREKLLLAISNSPNMDADVRLHTAEGW 1766          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A4D9CXX4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXX4_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.350e-46
Identity = 94/175 (53.71%), Postives = 113/175 (64.57%), Query Frame = 0
Query:   14 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYE-GVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 187
            V  VE   L   A  +     G+AAVVP ELL LFT EE E+L CGV EVDVELL++ T+YE GV P  PH++ FW  L  M A +R   + F   R+R+P SA DFPMNF L  P     E+PDDYLP AQTCFFSL+LP+YSS E  R KLL AI N+  MDAD  + +A+GW
Sbjct: 5677 VRLVETVRLKESAAMMGAFQEGMAAVVPQELLPLFTEEEVEQLICGVREVDVELLKKCTDYEDGVDPDAPHVKAFWEVLEEMQAEERTDFLRFAWARSRMPASAKDFPMNFRLQGPQGGAKEKPDDYLPHAQTCFFSLSLPQYSSKEILREKLLLAISNSPNMDADVRLHTAEGW 5851          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A7S2D1C9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D1C9_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.330e-45
Identity = 90/186 (48.39%), Postives = 108/186 (58.06%), Query Frame = 0
Query:    5 LSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEY----EGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADG 186
            LSPA R   +  VE R L      L     G+   VPA  L LFT EE E L CG PE+D+ELL++VTEY    EGV    PHIQ+FW AL  MD   R   + F S R+RLP S  +FPMNF +  P P     PD +LP +QTCFF+L+LP YSS + C  +LLYAI NA  MD D+  R   G
Sbjct:  268 LSPANRAEFIRQVEHRHLEAMNPVLTAFLTGLGTAVPAPFLPLFTPEELEVLLCGKPEIDIELLKKVTEYDTATEGVTEKAPHIQYFWAALEQMDQAQRANFINFVSARSRLPNSVDEFPMNFKIQGPKPGAKNEPDKHLPSSQTCFFTLSLPFYSSQQVCYQRLLYAIENATTMDDDFTNREEWG 453          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A3L6VV80_9STRA (HECT domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VV80_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.670e-44
Identity = 85/160 (53.12%), Postives = 104/160 (65.00%), Query Frame = 0
Query:   29 LEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPHP-ATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 187
            L  L  G++AV+P E+  LFTA+E E L CG  EVDV LL++ TEYE V PT  HI  FW  L      DR   +LF   R+R+P SA DFPMNF + APH      +PD YLP AQTCFFSL+LP YS+    +AKLLYAIRN+  MDAD  + +A+GW
Sbjct:  152 LAALREGLSAVIPMEIAGLFTAKELETLVCGRREVDVALLKQCTEYEDVDPTSAHIVVFWQVLEEFPPDDRTLFLLFVWARSRMPNSAKDFPMNFKIQAPHDQGARSQPDLYLPHAQTCFFSLSLPAYSTKAILKAKLLYAIRNSPNMDADVRLHNAEGW 311          
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Match: A0A662X8D1_9STRA (HECT domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8D1_9STRA)

HSP 1 Score: 164 bits (414), Expect = 3.610e-44
Identity = 92/176 (52.27%), Postives = 114/176 (64.77%), Query Frame = 0
Query:   14 VAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTAEEAEELFCGVPEVDVELLERVTEY-EGVQPTDPHIQHFWTALRGMDARDRGALVLFCSGRARLPPSAADFPMNFTLTAPH-PATHERPDDYLPLAQTCFFSLALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGW 187
            V  VE+  LT  ++ L  L  G+AAV+P EL  LFT  E E L CG  EVDV+LL + TEY EG   T PH+Q+FW  LR M + +R + + F   R+R+P SA DFPMNF L A H P     PD YLP AQTCFF+L LP Y+S E  RAKLLYAI+N+  MDAD  + +A+GW
Sbjct:  414 VQLVEKTRLTESSQQLAALKDGLAAVLPMELAPLFTPRELEVLICGRREVDVDLLRQCTEYSEGADETMPHVQNFWDVLREMTSEERTSFLRFVWARSRMPNSAKDFPMNFKLQAAHDPGAMGEPDLYLPHAQTCFFALRLPTYTSKEVLRAKLLYAIQNSPNMDADVRLHNAEGW 589          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|52072 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7P2_9STRA1.390e-135100.00Ubiquitin-protein ligase 1 (Fragment) n=1 Tax=Trib... [more]
A0A6H5KT07_9PHAE5.870e-7568.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCZ5_ECTSI2.760e-7469.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CPC5_9STRA8.200e-5052.87HECT-type E3 ubiquitin transferase n=1 Tax=Florenc... [more]
I2CP01_NANGC2.010e-4753.71E3 ubiquitin-protein ligase HERC2 n=1 Tax=Nannochl... [more]
W7THG0_9STRA1.290e-4653.71Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana... [more]
A0A4D9CXX4_9STRA1.350e-4653.71Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2D1C9_9STRA2.330e-4548.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3L6VV80_9STRA1.670e-4453.13HECT domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A662X8D1_9STRA3.610e-4452.27HECT domain-containing protein (Fragment) n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000569HECT domainSMARTSM00119hect_3coord: 1..177
e-value: 0.002
score: -132.7
IPR000569HECT domainPFAMPF00632HECTcoord: 17..173
e-value: 3.3E-32
score: 112.2
IPR000569HECT domainPROSITEPS50237HECTcoord: 29..182
score: 29.953106
NoneNo IPR availableGENE3D3.30.2410.10Hect, E3 ligase catalytic domaincoord: 61..175
e-value: 1.4E-28
score: 101.4
NoneNo IPR availablePIRSRPIRSR001569-1PIRSR001569-1coord: 19..172
e-value: 1.2E-21
score: 74.8
NoneNo IPR availablePANTHERPTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEcoord: 34..172
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 17..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:1022980..1024687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|52072mRNA_6990Tribonema minus UTEX_B_3156 mRNAContig_27 1022723..1024687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|52072|CE52071_63 ID=Trimin1|52072|CE52071_63|Name=jgi.p|Trimin1|52072|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=192bp
GDGGLSPAARRRAVAAVERRCLTRHARCLEDLYAGVAAVVPAELLALFTA
EEAEELFCGVPEVDVELLERVTEYEGVQPTDPHIQHFWTALRGMDARDRG
ALVLFCSGRARLPPSAADFPMNFTLTAPHPATHERPDDYLPLAQTCFFSL
ALPRYSSLETCRAKLLYAIRNANLMDADYVMRSADGWENLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
IPR035983Hect_E3_ubiquitin_ligase